Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

53F

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.40Å1.38Å
C2C7doub1.39Å1.43ÅAromatic
C2C3sing1.39Å1.41ÅAromatic
C7C6sing1.38Å1.39ÅAromatic
C3C4doub1.38Å1.38ÅAromatic
C6C5doub1.38Å1.42ÅAromatic
C4C5sing1.38Å1.42ÅAromatic
C5S8sing1.76Å1.72Å
S8O9doub1.42Å1.43Å
S8O10doub1.42Å1.41Å
S8N11sing1.66Å1.73Å
C12N11sing1.47Å1.51Å
C12C13sing1.53Å1.56Å
N11C16sing1.47Å1.52Å
C16C17sing1.53Å1.55Å
C14C13sing1.53Å1.53Å
C13C15sing1.53Å1.53Å
C17O18sing1.43Å1.36Å
C17C19sing1.53Å1.56Å
C32C19sing1.53Å1.56Å
C32C07sing1.51Å1.51Å
C19N20sing1.46Å1.46Å
C08C07doub1.38Å1.40ÅAromatic
C08C03sing1.38Å1.39ÅAromatic
C07C06sing1.38Å1.40ÅAromatic
C03C09doub1.39Å1.40ÅAromatic
C06C05doub1.38Å1.40ÅAromatic
C09C05sing1.39Å1.39ÅAromatic
C09O1sing1.36Å1.39Å
N20C21sing1.35Å1.38Å
O22C21doub1.22Å1.24Å
O1C1sing1.43Å1.41Å
C21O23sing1.35Å1.36Å
O23C24sing1.45Å1.41Å
C24C01sing1.53Å1.51Å
C24C31sing1.51Å1.53Å
C41C29sing1.55Å1.58Å
C41C31sing1.54Å1.54Å
C41O41sing1.43Å1.39Å
C29O28sing1.43Å1.41Å
C01C02sing1.53Å1.54Å
C31C27sing1.54Å1.55Å
O28C27sing1.45Å1.42Å
C02O01sing1.42Å1.43Å
C27O01sing1.43Å1.43Å
N1H1sing0.97Å1.00Å
N1H2sing0.97Å1.00Å
C4H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C12H5sing1.09Å1.10Å
C12H6sing1.09Å1.10Å
C13H7sing1.09Å1.10Å
C14H8sing1.09Å1.10Å
C14H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C15H11sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C15H13sing1.09Å1.10Å
C1H14sing1.09Å1.10Å
C1H15sing1.09Å1.10Å
C1H16sing1.09Å1.10Å
C3H17sing1.08Å1.08Å
C7H18sing1.08Å1.08Å
C16H19sing1.09Å1.10Å
C16H20sing1.09Å1.10Å
C17H21sing1.09Å1.10Å
O18H22sing0.97Å0.95Å
C19H23sing1.09Å1.10Å
C32H24sing1.09Å1.10Å
C32H25sing1.09Å1.10Å
C08H26sing1.08Å1.08Å
C06H27sing1.08Å1.08Å
C05H28sing1.08Å1.08Å
O41H29sing0.97Å0.95Å
C03H30sing1.08Å1.08Å
N20H31sing0.97Å1.00Å
C24H32sing1.09Å1.10Å
C01H33sing1.09Å1.10Å
C01H34sing1.09Å1.10Å
C31H35sing1.09Å1.10Å
C41H36sing1.09Å1.10Å
C29H37sing1.09Å1.10Å
C29H38sing1.09Å1.10Å
C27H39sing1.09Å1.10Å
C02H40sing1.09Å1.10Å
C02H41sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C2C7123.3°120.1°
N1C2C3122.7°120.1°
C2N1H1109.5°119.9°
C2N1H2109.5°120.0°
C7C2C3114.0°119.9°
C2C7C6121.8°119.9°
C2C7H18119.1°120.0°
C2C3C4122.1°119.9°
C2C3H17118.9°120.0°
C7C6C5125.5°120.1°
C7C6H4117.3°120.0°
C6C7H18119.1°120.1°
C3C4C5126.2°120.1°
C3C4H3116.9°120.0°
C4C3H17119.0°120.1°
C6C5C4110.5°120.1°
C6C5S8126.0°119.9°
C5C6H4117.3°120.0°
C4C5S8123.5°119.9°
C5C4H3116.9°120.0°
C5S8O9108.8°106.4°
C5S8O10113.8°106.4°
C5S8N11112.4°107.2°
O9S8O10112.9°123.2°
O9S8N11103.5°106.4°
O10S8N11105.0°106.4°
S8N11C12115.5°120.0°
S8N11C16117.4°119.9°
N11C12C13118.5°109.4°
C12N11C16109.0°120.0°
N11C12H5107.1°109.4°
N11C12H6107.1°109.4°
C12C13C14111.0°109.5°
C12C13C15112.4°109.4°
C13C12H5107.2°109.5°
C13C12H6107.2°109.6°
C12C13H7108.5°109.5°
N11C16C17115.8°109.5°
N11C16H19107.9°109.5°
N11C16H20107.9°109.4°
C16C17O18112.2°109.5°
C16C17C19116.3°109.5°
C17C16H19107.9°109.5°
C17C16H20107.9°109.5°
C16C17H21105.0°109.4°
C14C13C15107.0°109.4°
C14C13H7108.9°109.5°
C13C14H8109.5°109.5°
C13C14H9109.5°109.5°
C13C14H10109.5°109.4°
C15C13H7108.9°109.5°
C13C15H11109.5°109.4°
C13C15H12109.5°109.4°
C13C15H13109.5°109.5°
O18C17C19110.5°109.5°
O18C17H21107.1°109.5°
C17O18H22109.5°114.0°
C17C19C32108.5°109.4°
C17C19N20111.6°109.4°
C19C17H21105.0°109.5°
C17C19H23109.4°109.5°
C19C32C07116.8°109.5°
C32C19N20107.4°109.5°
C32C19H23109.3°109.5°
C19C32H24107.6°109.5°
C19C32H25107.6°109.5°
C32C07C08120.6°119.9°
C32C07C06124.0°120.0°
C07C32H24107.6°109.4°
C07C32H25107.6°109.5°
C19N20C21121.7°120.0°
N20C19H23110.7°109.5°
C19N20H31119.2°120.0°
C07C08C03123.4°120.0°
C08C07C06115.4°120.1°
C07C08H26118.3°119.9°
C08C03C09120.6°120.0°
C03C08H26118.3°120.1°
C08C03H30119.7°119.9°
C07C06C05122.0°120.1°
C07C06H27119.0°120.0°
C03C09C05117.5°119.9°
C03C09O1120.8°120.1°
C09C03H30119.7°120.0°
C06C05C09121.2°119.9°
C05C06H27119.0°119.9°
C06C05H28119.4°120.0°
C05C09O1121.8°120.1°
C09C05H28119.4°120.0°
C09O1C1119.7°117.0°
N20C21O22121.5°120.0°
N20C21O23117.0°120.0°
C21N20H31119.1°120.0°
O22C21O23119.6°120.0°
O1C1H14109.5°109.4°
O1C1H15109.5°109.4°
O1C1H16109.5°109.5°
C21O23C24121.3°117.0°
O23C24C01111.2°109.2°
O23C24C31106.7°109.2°
O23C24H32111.0°109.2°
C01C24C31109.0°111.0°
C24C01C02110.1°107.9°
C01C24H32109.6°109.2°
C24C01H33109.3°109.8°
C24C01H34109.3°109.8°
C24C31C41118.8°112.0°
C24C31C27112.6°113.0°
C31C24H32109.3°109.2°
C24C31H35108.6°109.9°
C29C41C31104.1°101.6°
C29C41O41110.9°111.0°
C41C29O28107.6°107.6°
C29C41H36109.4°111.0°
C41C29H37109.9°109.8°
C41C29H38110.0°109.8°
C31C41O41110.1°111.0°
C41C31C2799.4°101.5°
C41C31H35108.4°110.3°
C31C41H36109.8°111.0°
C41O41H29109.5°114.0°
O41C41H36112.2°110.9°
C29O28C27106.4°109.5°
O28C29H37110.0°109.9°
O28C29H38110.0°109.9°
C01C02O01114.1°108.3°
C02C01H33109.3°109.8°
C02C01H34109.3°109.8°
C01C02H40108.3°109.7°
C01C02H41108.3°109.7°
C31C27O28107.0°103.8°
C31C27O01117.9°110.9°
C27C31H35108.4°109.9°
C31C27H39106.3°111.6°
O28C27O01109.8°106.3°
O28C27H39107.8°111.6°
C02O01C27118.6°116.1°
O01C02H40108.3°109.7°
O01C02H41108.3°109.7°
O01C27H39107.7°112.2°
H1N1H2109.5°120.0°
H5C12H6109.5°109.5°
H8C14H9109.4°109.5°
H8C14H10109.5°109.5°
H9C14H10109.5°109.5°
H11C15H12109.4°109.5°
H11C15H13109.5°109.5°
H12C15H13109.4°109.5°
H14C1H15109.5°109.4°
H14C1H16109.4°109.5°
H15C1H16109.5°109.5°
H19C16H20109.5°109.5°
H24C32H25109.5°109.5°
H33C01H34109.4°109.8°
H37C29H38109.5°109.9°
H40C02H41109.5°109.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2C7C3179.9°179.8°
N1C2C7C6179.6°180.0°
N1C2C3C4179.8°180.0°
C2N1H1H2120.0°179.7°
N1C2C3H170.2°0.0°
N1C2C7H180.4°0.0°
C2C7C6H18180.0°180.0°
C7C2C3C40.1°0.3°
C2C7C6C50.3°0.0°
C7C2N1H1180.0°0.0°
C7C2N1H260.0°179.7°
C2C7C6H4179.7°179.7°
C7C2C3H17179.9°179.8°
C3C2C7C60.2°0.3°
C2C3C4H17180.0°180.0°
C2C3C4C50.0°0.0°
C3C2N1H10.2°179.7°
C3C2N1H2119.8°0.1°
C2C3C4H3180.0°179.8°
C3C2C7H18179.7°179.7°
C7C6C5H4180.0°179.8°
C7C6C5C40.1°0.2°
C7C6C5S8179.4°179.7°
C3C4C5C60.0°0.2°
C3C4C5H3180.0°179.8°
C3C4C5S8179.5°179.7°
C6C5C4S8179.5°179.9°
C6C5S8O923.5°156.4°
C6C5S8O10150.3°23.4°
C6C5S8N1190.5°90.0°
C6C5C4H3180.0°180.0°
C5C6C7H18179.7°180.0°
C4C5S8O9157.1°23.5°
C4C5S8O1030.3°156.5°
C4C5S8N1188.9°90.1°
C4C5C6H4179.9°180.0°
C5C4C3H17180.0°180.0°
C5S8O9O10127.3°123.0°
C5S8O9N11119.7°114.1°
C5S8O10N11123.3°114.0°
C5S8N11C1242.0°90.0°
C5S8N11C1688.8°90.0°
S8C5C4H30.5°0.1°
S8C5C6H40.7°0.1°
O9S8O10N11112.0°122.9°
O9S8N11C12159.2°156.4°
O9S8N11C1628.4°23.6°
O10S8N11C1282.3°23.5°
O10S8N11C16146.9°156.5°
S8N11C12C16134.7°180.0°
S8N11C12C13114.7°115.9°
S8N11C16C17109.2°99.6°
S8N11C12H56.6°124.1°
S8N11C12H6124.0°4.2°
S8N11C16H19129.9°20.4°
S8N11C16H2011.7°140.4°
N11C12C13H5121.3°119.9°
N11C12C13H6121.3°120.0°
C12N11C16C17117.1°80.4°
N11C12C13C14143.0°62.7°
N11C12C13C1523.2°177.4°
N11C12H5H6115.9°119.9°
N11C12C13H797.4°57.4°
C12N11C16H193.8°159.6°
C12N11C16H20122.0°39.6°
C13C12N11C16110.6°64.1°
C12C13C14C15123.0°119.9°
C12C13C14H7119.4°120.1°
C12C13C15H7120.3°120.0°
C13C12H5H6115.9°120.1°
C12C13C14H8180.0°64.4°
C12C13C14H960.0°175.6°
C12C13C14H1060.0°55.6°
C12C13C15H11180.0°60.0°
C12C13C15H1260.0°180.0°
C12C13C15H1360.0°60.0°
N11C16C17H19120.9°120.0°
N11C16C17H20120.9°120.0°
N11C16C17O18176.7°64.2°
N11C16C17C1948.1°175.8°
C16N11C12H5128.1°55.9°
C16N11C12H610.7°175.8°
N11C16H19H20117.1°120.0°
N11C16C17H2167.4°55.8°
C16C17O18C19131.6°120.0°
C16C17O18H21114.7°120.0°
C16C17C19H21115.5°120.0°
C16C17C19C3280.8°65.0°
C16C17C19N20161.1°175.0°
C17C16H19H20117.1°120.0°
C16C17O18H22180.0°60.0°
C16C17C19H2338.3°55.0°
C14C13C15H7117.6°120.0°
C14C13C12H595.8°177.4°
C14C13C12H621.7°57.3°
C13C14H8H9120.0°120.0°
C13C14H8H10120.0°119.9°
C13C14H9H10120.0°120.0°
C14C13C15H1157.9°180.0°
C14C13C15H1262.1°60.0°
C14C13C15H13178.0°60.0°
C15C13C12H5144.5°57.4°
C15C13C12H698.1°62.6°
C15C13C14H857.1°55.5°
C15C13C14H9177.0°64.5°
C15C13C14H1063.0°175.5°
C13C15H11H12120.0°120.0°
C13C15H11H13120.0°119.9°
C13C15H12H13120.0°120.0°
O18C17C19H21115.1°120.0°
O18C17C19C3248.6°55.0°
O18C17C19N2069.5°65.0°
O18C17C16H1962.4°55.8°
O18C17C16H2055.8°175.8°
O18C17C19H23167.7°175.0°
C17C19C32N20120.8°120.0°
C17C19C32H23119.1°120.0°
C17C19C32C07172.2°175.0°
C17C19N20H23122.0°120.0°
C17C19N20C21134.8°155.0°
C19C17C16H19169.0°64.2°
C19C17C16H2072.8°55.8°
C19C17O18H2248.4°60.0°
C17C19C32H2451.1°65.1°
C17C19C32H2566.8°55.0°
C17C19N20H3145.2°25.0°
C19C32C07H24121.0°120.0°
C19C32C07H25121.1°120.1°
C32C19N20H23119.2°120.0°
C19C32C07C0860.6°89.7°
C19C32C07C06119.0°90.0°
C32C19N20C21106.4°85.0°
C32C19C17H21163.7°175.1°
C19C32H24H25116.7°120.1°
C32C19N20H3173.5°94.9°
C07C32C19N2051.4°65.0°
C32C07C08C06179.7°179.7°
C32C07C08C03179.9°180.0°
C32C07C06C05179.7°180.0°
C07C32C19H2368.7°55.1°
C07C32H24H25116.7°120.0°
C32C07C08H260.1°0.0°
C32C07C06H270.3°0.0°
C19N20C21H31180.0°179.9°
C19N20C21O223.7°0.0°
C19N20C21O23160.4°180.0°
N20C19C17H2145.6°55.0°
N20C19C32H2469.6°54.9°
N20C19C32H25172.5°175.0°
C07C08C03H26180.0°179.9°
C07C08C03C090.3°0.1°
C08C07C06C050.1°0.3°
C08C07C32H24178.3°150.3°
C08C07C32H2560.4°30.3°
C08C07C06H27179.9°179.7°
C07C08C03H30179.6°179.9°
C03C08C07C060.2°0.3°
C08C03C09H30180.0°180.0°
C08C03C09C050.2°0.2°
C08C03C09O1179.9°179.9°
C07C06C05H27180.0°179.9°
C07C06C05C090.0°0.1°
C06C07C32H242.0°30.0°
C06C07C32H25119.9°150.0°
C06C07C08H26179.8°179.7°
C07C06C05H28180.0°180.0°
C03C09C05C060.1°0.2°
C03C09C05O1179.8°179.7°
C03C09O1C1143.1°0.3°
C09C03C08H26179.7°180.0°
C03C09C05H28179.9°179.7°
C06C05C09H28180.0°179.9°
C06C05C09O1179.9°179.9°
C05C09O1C137.1°180.0°
C09C05C06H27180.0°180.0°
C05C09C03H30179.7°179.8°
C09O1C1H14180.0°60.0°
C09O1C1H1560.0°180.0°
C09O1C1H1660.0°60.0°
O1C09C05H280.1°0.0°
O1C09C03H300.1°0.1°
N20C21O22O23163.7°180.0°
N20C21O23C24178.4°180.0°
C21N20C19H2312.8°35.0°
O22C21O23C2417.2°0.0°
O22C21N20H31176.3°180.0°
O1C1H14H15120.0°119.9°
O1C1H14H16120.0°120.0°
O1C1H15H16120.0°120.0°
C21O23C24C0195.0°90.0°
C21O23C24C31146.2°148.5°
O23C21N20H3119.6°0.0°
C21O23C24H3227.2°29.2°
O23C24C01C31117.3°120.3°
O23C24C01H32123.0°119.3°
O23C24C31H32120.1°119.3°
O23C24C31C4146.0°55.8°
O23C24C01C0257.3°176.9°
O23C24C31C2769.5°169.6°
O23C24C01H33177.5°63.5°
O23C24C01H3462.8°57.3°
O23C24C31H35170.5°67.2°
C01C24C31H32119.8°120.3°
C01C24C31C41166.2°64.6°
C24C01C02H33120.1°119.6°
C24C01C02H34120.1°119.7°
C01C24C31C2750.7°49.3°
C24C01C02O0154.8°61.6°
C24C01H33H34119.7°120.8°
C01C24C31H3569.3°172.4°
C24C01C02H40175.5°58.0°
C24C01C02H4165.9°178.7°
C24C31C41C2998.9°156.5°
C24C31C41C27122.3°120.7°
C24C31C41H35124.6°122.8°
C24C31C41O41142.1°85.4°
C31C24C01C0260.0°56.6°
C24C31C27H35120.1°123.2°
C24C31C27O2888.2°159.4°
C24C31C27O0136.0°45.6°
C31C24C01H3360.1°176.2°
C31C24C01H34179.9°63.1°
C24C31C41H3618.1°38.4°
C24C31C27H39156.8°80.3°
C29C41C31O41119.0°118.1°
C29C41C31H36117.0°118.1°
C29C41O41H36122.6°123.9°
C41C29O28H37119.7°119.5°
C41C29O28H38119.7°119.5°
C29C41C31C2723.5°35.8°
C41C29O28C2721.9°4.1°
C29C41O41H29180.0°61.5°
C29C41C31H35136.5°80.7°
C41C29H37H38120.9°120.9°
C31C41O41H36122.6°123.9°
C31C41C29O282.8°20.7°
C41C31C27H35113.1°116.8°
C41C31C27O2838.5°39.4°
C41C31C27O01162.7°74.4°
C31C41O41H2965.2°173.7°
C41C31C24H3274.1°175.1°
C31C41C29H37117.0°140.2°
C31C41C29H38122.5°98.8°
C41C31C27H3976.4°159.7°
O41C41C29O28115.7°138.8°
O41C41C31C2795.6°153.8°
O41C41C31H3517.5°37.3°
O41C41C29H37124.6°101.7°
O41C41C29H384.0°19.3°
C29O28C27C3138.9°27.5°
C29O28C27O01167.9°89.5°
O28C29C41H36120.1°97.3°
O28C29H37H38120.9°121.0°
C29O28C27H3975.1°147.8°
C01C02O01H40120.7°119.7°
C01C02O01H41120.7°119.7°
C01C02O01C2739.5°63.0°
C02C01C24H32179.6°63.8°
C02C01H33H34119.7°120.8°
C01C02H40H41117.9°120.6°
C31C27O28O01129.1°117.0°
C31C27O28H39113.9°120.3°
C31C27O01C0230.4°54.0°
C31C27O01H39120.1°125.5°
C27C31C24H32170.4°71.1°
C27C31C41H36140.5°82.3°
O28C27O01C0292.4°166.2°
O28C27O01H39117.1°122.3°
O28C27C31H35151.6°77.4°
C27O28C29H37141.6°115.4°
C27O28C29H3897.8°123.6°
O01C02C01H3365.3°178.8°
O01C02C01H34174.9°58.0°
C02O01C27H39150.5°71.5°
O01C02H40H41117.9°120.6°
O01C27C31H3584.1°168.8°
C27O01C02H40160.1°56.7°
C27O01C02H4181.2°177.3°
H3C4C3H170.0°0.2°
H4C6C7H180.3°0.3°
H5C12C13H723.9°62.5°
H6C12C13H7141.4°177.4°
H7C13C14H860.5°175.5°
H7C13C14H959.4°55.5°
H7C13C14H10179.4°64.5°
H7C13C15H1159.7°60.0°
H7C13C15H12179.7°60.0°
H7C13C15H1360.3°180.0°
H8C14H9H10120.0°120.0°
H11C15H12H13120.0°120.1°
H14C1H15H16120.0°120.1°
H19C16C17H2153.5°175.8°
H20C16C17H21171.7°64.2°
H21C17O18H2265.4°180.0°
H21C17C19H2377.2°65.0°
H23C19C32H24170.3°174.9°
H23C19C32H2552.4°65.0°
H23C19N20H31167.3°145.0°
H26C08C03H300.4°0.0°
H27C06C05H280.0°0.1°
H29O41C41H3657.4°62.4°
H32C24C01H3359.5°55.8°
H32C24C01H3460.3°176.6°
H32C24C31H3550.4°52.1°
H33C01C02H4055.4°61.6°
H33C01C02H41174.0°59.1°
H34C01C02H4064.4°177.7°
H34C01C02H4154.3°61.7°
H35C31C41H36106.5°161.2°
H35C31C27H3936.7°42.9°
H36C41C29H370.4°22.2°
H36C41C29H38120.2°143.1°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon