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52H

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C5doub1.40Å1.40ÅAromatic
C4N3sing1.33Å1.36ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C5C6sing1.41Å1.40ÅAromatic
C5N7sing1.35Å1.35ÅAromatic
C6N1doub1.33Å1.35ÅAromatic
C6N6sing1.38Å1.35Å
C8N9sing1.36Å1.36ÅAromatic
C8N7doub1.30Å1.35ÅAromatic
N1C2sing1.32Å1.33ÅAromatic
N3C2doub1.32Å1.33ÅAromatic
CAACBBsing1.53Å1.53Å
CBBCABsing1.53Å1.53Å
CBBCACsing1.53Å1.50Å
CBBCAXsing1.53Å1.56Å
CAXOAHsing1.43Å1.47Å
CAXCATsing1.51Å1.55Å
CATOAEdoub1.21Å1.24Å
CATNAQsing1.35Å1.32Å
NAQSBEsing1.66Å1.63Å
SBEOAFdoub1.42Å1.48Å
SBEOAGdoub1.42Å1.47Å
SBEO5'sing1.52Å1.46Å
O5'C5'sing1.43Å1.47Å
C5'C4'sing1.53Å1.55Å
C4'O4'sing1.44Å1.45Å
C4'C3'sing1.54Å1.53Å
O4'C1'sing1.44Å1.44Å
C3'O3'sing1.43Å1.42Å
C3'C2'sing1.55Å1.54Å
C2'O2'sing1.43Å1.45Å
C2'C1'sing1.55Å1.53Å
C1'N9sing1.46Å1.49Å
C8H8sing1.08Å1.08Å
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CABHABsing1.09Å1.10Å
CABHABAsing1.09Å1.10Å
CABHABBsing1.09Å1.10Å
CACHACsing1.09Å1.10Å
CACHACAsing1.09Å1.10Å
CACHACBsing1.09Å1.10Å
CAXHAXsing1.09Å1.10Å
OAHHOAHsing0.97Å0.95Å
NAQHNAQsing0.97Å1.00Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
C2H2sing1.08Å1.08Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4N3121.3°119.1°
C5C4N9107.3°106.0°
C4C5C6117.4°118.2°
C4C5N7108.5°107.1°
N3C4N9131.4°134.9°
C4N3C2119.1°120.7°
C4N9C8107.6°107.4°
C4N9C1'124.4°126.3°
C6C5N7134.1°134.7°
C5C6N1118.0°118.5°
C5C6N6120.5°120.8°
C5N7C8106.3°109.5°
N1C6N6121.5°120.8°
C6N1C2123.1°121.2°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
N9C8N7110.4°110.0°
C8N9C1'127.9°126.3°
N9C8H8124.8°125.0°
N7C8H8124.8°125.1°
N1C2N3121.0°122.4°
N1C2H2119.5°118.8°
N3C2H2119.5°118.8°
CAACBBCAB107.1°109.5°
CAACBBCAC107.0°109.5°
CAACBBCAX110.7°109.5°
CBBCAAHAA109.5°109.5°
CBBCAAHAAA109.5°109.5°
CBBCAAHAAB109.4°109.5°
CABCBBCAC112.3°109.4°
CABCBBCAX112.2°109.5°
CBBCABHAB109.5°109.5°
CBBCABHABA109.5°109.6°
CBBCABHABB109.5°109.5°
CACCBBCAX107.5°109.5°
CBBCACHAC109.5°109.5°
CBBCACHACA109.5°109.4°
CBBCACHACB109.4°109.5°
CBBCAXOAH111.9°109.4°
CBBCAXCAT117.3°109.5°
CBBCAXHAX101.1°109.5°
OAHCAXCAT106.4°109.5°
OAHCAXHAX113.1°109.5°
CAXOAHHOAH109.5°114.0°
CAXCATOAE121.3°120.0°
CAXCATNAQ113.5°120.0°
CATCAXHAX107.2°109.5°
OAECATNAQ125.0°120.0°
CATNAQSBE123.7°120.0°
CATNAQHNAQ118.1°120.0°
NAQSBEOAF110.5°106.4°
NAQSBEOAG108.3°106.4°
NAQSBEO5'113.2°107.2°
SBENAQHNAQ118.1°120.0°
OAFSBEOAG114.5°123.1°
OAFSBEO5'103.4°106.5°
OAGSBEO5'107.0°106.4°
SBEO5'C5'115.6°113.9°
O5'C5'C4'111.2°109.4°
O5'C5'H5'108.9°109.5°
O5'C5'H5'A108.5°109.5°
C5'C4'O4'106.8°109.9°
C5'C4'C3'110.9°109.9°
C4'C5'H5'108.9°109.5°
C4'C5'H5'A108.5°109.4°
C5'C4'H4'109.4°109.9°
O4'C4'C3'106.6°107.3°
C4'O4'C1'108.9°107.0°
O4'C4'H4'113.5°109.9°
C4'C3'O3'108.6°110.4°
C4'C3'C2'103.0°104.2°
C3'C4'H4'109.6°110.0°
C4'C3'H3'114.7°110.4°
O4'C1'C2'102.9°103.5°
O4'C1'N9112.8°110.6°
O4'C1'H1'111.8°110.6°
O3'C3'C2'111.2°110.5°
O3'C3'H3'107.1°110.4°
C3'O3'HO3'109.5°114.0°
C3'C2'O2'115.0°110.9°
C3'C2'C1'101.6°102.1°
C2'C3'H3'112.3°110.7°
C3'C2'H2'111.1°110.9°
O2'C2'C1'109.2°110.9°
O2'C2'H2'103.8°110.8°
C2'O2'HO2'109.5°114.0°
C2'C1'N9109.9°110.6°
C1'C2'H2'116.7°111.0°
C2'C1'H1'114.6°110.7°
N9C1'H1'105.0°110.6°
HAACAAHAAA109.4°109.5°
HAACAAHAAB109.5°109.4°
HAAACAAHAAB109.5°109.5°
HABCABHABA109.4°109.5°
HABCABHABB109.5°109.4°
HABACABHABB109.5°109.4°
HACCACHACA109.5°109.5°
HACCACHACB109.5°109.5°
HACACACHACB109.5°109.5°
H5'C5'H5'A110.8°109.5°
HN6N6HN6A109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4N3N9178.4°179.7°
C4C5C6N7179.2°180.0°
C4C5C6N12.8°0.0°
C4C5C6N6179.8°180.0°
C5C4N9C80.8°0.0°
C4C5N7C80.2°0.4°
C5C4N3C21.0°0.1°
C5C4N9C1'179.7°180.0°
N3C4C5C61.5°0.0°
N3C4C5N7179.1°180.0°
N3C4N9C8179.4°179.7°
C4N3C2N11.8°0.1°
N3C4N9C1'1.7°0.2°
C4N3C2H2178.2°179.9°
N9C4C5C6179.7°179.8°
N9C4C5N70.4°0.2°
C4N9C8C1'178.8°180.0°
C4N9C8N70.9°0.3°
N9C4N3C2179.4°179.6°
C4N9C1'O4'123.8°156.4°
C4N9C1'C2'122.0°89.5°
C4N9C8H8179.0°180.0°
C4N9C1'H1'1.7°33.5°
C5C6N1N6177.4°180.0°
C6C5N7C8179.0°179.6°
C5C6N1C23.8°0.0°
C5C6N6HN6160.8°0.1°
C5C6N6HN6A40.7°180.0°
N7C5C6N1178.1°180.0°
N7C5C6N60.6°0.0°
C5N7C8N90.7°0.4°
C5N7C8H8179.3°179.9°
C6N1C2N33.3°0.1°
C6N1C2H2176.7°179.9°
N1C6N6HN616.6°179.9°
N1C6N6HN6A136.6°0.0°
N6C6N1C2178.8°180.0°
C6N6HN6HN6A120.0°179.9°
N9C8N7H8180.0°179.7°
C8N9C1'O4'57.6°23.5°
C8N9C1'C2'56.6°90.5°
C8N9C1'H1'179.6°146.5°
N7C8N9C1'179.8°179.7°
N1C2N3H2180.0°180.0°
CAACBBCABCAC117.1°120.0°
CAACBBCABCAX121.7°120.0°
CAACBBCACCAX118.9°120.0°
CAACBBCAXOAH56.2°64.8°
CAACBBCAXCAT179.5°175.2°
CBBCAAHAAHAAA120.0°120.0°
CBBCAAHAAHAAB120.0°120.0°
CBBCAAHAAAHAAB120.0°120.0°
CAACBBCABHAB1.7°59.9°
CAACBBCABHABA121.7°180.0°
CAACBBCABHABB118.3°60.0°
CAACBBCACHAC177.7°60.1°
CAACBBCACHACA62.3°180.0°
CAACBBCACHACB57.7°59.9°
CAACBBCAXHAX64.4°55.2°
CABCBBCACCAX123.9°120.0°
CABCBBCAXOAH175.8°55.2°
CABCBBCAXCAT60.9°64.7°
CABCBBCAAHAA151.5°60.0°
CABCBBCAAHAAA88.6°180.0°
CABCBBCAAHAAB31.5°60.0°
CBBCABHABHABA120.0°120.1°
CBBCABHABHABB120.0°120.0°
CBBCABHABAHABB120.0°120.0°
CABCBBCACHAC60.4°179.9°
CABCBBCACHACA179.5°60.0°
CABCBBCACHACB59.5°60.1°
CABCBBCAXHAX55.1°175.2°
CACCBBCAXOAH60.2°175.2°
CACCBBCAXCAT63.0°55.2°
CACCBBCAAHAA30.9°180.0°
CACCBBCAAHAAA150.8°60.0°
CACCBBCAAHAAB89.1°60.0°
CACCBBCABHAB118.9°60.0°
CACCBBCABHABA121.2°60.0°
CACCBBCABHABB1.1°180.0°
CBBCACHACHACA120.0°120.0°
CBBCACHACHACB120.0°120.0°
CBBCACHACAHACB120.0°120.0°
CACCBBCAXHAX179.1°64.8°
CBBCAXOAHCAT129.3°120.0°
CBBCAXOAHHAX113.4°120.0°
CBBCAXCATHAX112.7°120.0°
CBBCAXCATOAE97.8°102.0°
CBBCAXCATNAQ86.8°77.9°
CAXCBBCAAHAA85.9°60.0°
CAXCBBCAAHAAA34.0°60.0°
CAXCBBCAAHAAB154.1°180.0°
CAXCBBCABHAB119.9°180.0°
CAXCBBCABHABA0.0°59.9°
CAXCBBCABHABB120.0°60.1°
CAXCBBCACHAC63.4°60.0°
CAXCBBCACHACA56.6°60.0°
CAXCBBCACHACB176.6°180.0°
CBBCAXOAHHOAH119.5°60.0°
OAHCAXCATHAX121.3°120.0°
OAHCAXCATOAE28.2°17.9°
OAHCAXCATNAQ147.1°162.2°
CAXCATOAENAQ174.8°179.9°
CAXCATNAQSBE173.9°174.7°
CATCAXOAHHOAH9.7°60.0°
CAXCATNAQHNAQ6.1°5.3°
OAECATNAQSBE1.3°5.4°
OAECATCAXHAX149.5°137.9°
OAECATNAQHNAQ178.7°174.6°
CATNAQSBEHNAQ180.0°180.0°
CATNAQSBEOAF67.0°178.6°
CATNAQSBEOAG166.9°48.5°
CATNAQSBEO5'48.5°65.0°
NAQCATCAXHAX25.9°42.1°
NAQSBEOAFOAG122.6°122.9°
NAQSBEOAFO5'121.4°114.1°
NAQSBEOAGO5'122.3°114.1°
NAQSBEO5'C5'63.5°75.0°
OAFSBEOAGO5'113.9°123.0°
OAFSBEO5'C5'176.8°38.6°
OAFSBENAQHNAQ113.0°1.4°
OAGSBEO5'C5'55.6°171.5°
OAGSBENAQHNAQ13.1°131.5°
SBEO5'C5'C4'168.3°180.0°
O5'SBENAQHNAQ131.5°115.0°
SBEO5'C5'H5'48.3°60.0°
SBEO5'C5'H5'A72.5°60.1°
O5'C5'C4'H5'120.0°120.0°
O5'C5'C4'H5'A119.3°119.9°
O5'C5'C4'O4'66.1°66.5°
O5'C5'C4'C3'49.7°175.7°
O5'C5'H5'H5'A119.3°120.1°
O5'C5'C4'H4'170.7°54.5°
C5'C4'O4'C3'118.6°119.4°
C5'C4'O4'H4'120.7°121.1°
C5'C4'C3'H4'120.9°121.2°
C5'C4'O4'C1'129.8°145.9°
C5'C4'C3'O3'141.3°119.9°
C5'C4'C3'C2'100.8°121.4°
C4'C5'H5'H5'A119.3°120.0°
C5'C4'C3'H3'21.6°2.5°
O4'C4'C3'H4'123.2°119.5°
O4'C4'C3'O3'102.8°120.7°
O4'C4'C3'C2'15.1°2.0°
C4'O4'C1'C2'33.1°40.1°
C4'O4'C1'N9151.5°158.6°
O4'C4'C5'H5'173.9°53.5°
O4'C4'C5'H5'A53.2°173.6°
O4'C4'C3'H3'137.5°116.8°
C4'O4'C1'H1'90.4°78.5°
C3'C4'O4'C1'11.2°26.5°
C4'C3'O3'C2'112.7°114.8°
C4'C3'O3'H3'124.4°122.4°
C4'C3'C2'H3'123.9°118.7°
C4'C3'C2'O2'151.7°139.0°
C4'C3'C2'C1'33.9°20.9°
C3'C4'C5'H5'70.3°64.2°
C3'C4'C5'H5'A169.0°55.8°
C4'C3'O3'HO3'90.4°180.0°
C4'C3'C2'H2'90.8°97.4°
O4'C1'C2'C3'41.1°37.0°
O4'C1'C2'O2'163.0°155.2°
O4'C1'C2'N9120.4°118.5°
O4'C1'C2'H1'121.6°118.5°
O4'C1'N9H1'122.0°123.0°
C1'O4'C4'H4'109.5°93.0°
O4'C1'C2'H2'79.8°81.2°
O3'C3'C2'H3'119.9°122.6°
O3'C3'C2'O2'35.6°20.4°
O3'C3'C2'C1'82.2°97.8°
O3'C3'C4'H4'20.4°1.3°
O3'C3'C2'H2'153.0°144.0°
C3'C2'O2'C1'113.4°112.7°
C3'C2'O2'H2'121.5°123.6°
C3'C2'C1'H2'120.9°118.2°
C3'C2'C1'N9161.5°155.5°
C2'C3'C4'H4'138.3°117.4°
C2'C3'O3'HO3'156.9°65.2°
C3'C2'O2'HO2'145.6°61.4°
C3'C2'C1'H1'80.5°81.5°
O2'C2'C1'H2'117.2°123.6°
O2'C2'C1'N976.6°86.3°
O2'C2'C3'H3'84.3°102.2°
O2'C2'C1'H1'41.4°36.7°
C2'C1'N9H1'123.8°123.0°
C1'C2'C3'H3'157.9°139.6°
C1'C2'O2'HO2'32.3°174.1°
C1'N9C8H80.2°0.1°
N9C1'C2'H2'40.6°37.3°
HAACAAHAAAHAAB120.0°119.9°
HABCABHABAHABB120.0°119.9°
HACCACHACAHACB120.0°120.0°
HAXCAXOAHHOAH127.1°180.0°
H5'C5'C4'H4'50.7°174.6°
H5'AC5'C4'H4'70.0°65.4°
H4'C4'C3'H3'99.3°123.7°
H3'C3'O3'HO3'33.9°57.5°
H3'C3'C2'H2'33.1°21.4°
H2'C2'O2'HO2'92.8°62.2°
H2'C2'C1'H1'158.6°160.3°

223790

PDB entries from 2024-08-14

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