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50T

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2N1sing1.32Å1.35ÅAromatic
C2N3doub1.32Å1.37ÅAromatic
C4C5doub1.40Å1.37ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C4N3sing1.33Å1.36ÅAromatic
C5C6sing1.41Å1.48ÅAromatic
C5N7sing1.36Å1.35ÅAromatic
C6N1doub1.33Å1.36ÅAromatic
C6N6sing1.38Å1.47Å
C8N9sing1.36Å1.36ÅAromatic
C1'N9sing1.47Å1.48Å
C8N7doub1.30Å1.34ÅAromatic
O3BVBsing1.84Å2.12Å
O2'C2'sing1.43Å1.46Å
O2BVBsing1.84Å1.77Å
O3'C3'sing1.43Å1.48Å
C3'C4'sing1.54Å1.54Å
C3'C2'sing1.55Å1.49Å
C4'C5'sing1.53Å1.52Å
C4'O4'sing1.44Å1.44Å
C5'O5'sing1.43Å1.43Å
O5'PAsing1.61Å1.58Å
PAO1Adoub1.48Å1.50Å
PAO2Asing1.61Å1.59Å
PAO3Asing1.61Å1.63Å
O3AVBsing1.84Å1.82Å
O1BVBsing1.84Å1.78Å
O4BVBsing1.84Å1.93Å
C2'C1'sing1.55Å1.54Å
C1'O4'sing1.44Å1.42Å
O2AHOAsing0.97Å0.95Å
C2H2sing1.08Å1.08Å
N6H61Nsing0.97Å1.00Å
N6H62Nsing0.97Å1.00Å
C8H8sing1.08Å1.08Å
O3BH3Bsing0.97Å0.95Å
O2'H2'sing0.97Å0.95Å
C2'HAsing1.09Å1.10Å
O3'H3'sing0.97Å0.95Å
C3'HBsing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O1BH1Bsing0.97Å0.95Å
O2BH2Bsing0.97Å0.95Å
O4BH4Bsing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C2N3121.6°122.5°
C2N1C6119.7°121.2°
N1C2H2119.2°118.8°
C2N3C4121.5°120.6°
N3C2H2119.2°118.7°
C5C4N9106.2°106.0°
C5C4N3120.1°119.1°
C4C5C6117.4°118.2°
C4C5N7108.2°107.1°
N9C4N3133.7°135.0°
C4N9C8110.6°107.5°
C4N9C1'124.0°126.2°
C6C5N7134.4°134.7°
C5C6N1119.6°118.4°
C5C6N6120.1°120.8°
C5N7C8108.6°109.5°
N1C6N6120.3°120.8°
C6N6H61N109.5°120.0°
C6N6H62N109.5°120.0°
C8N9C1'125.4°126.3°
N9C8N7106.4°109.9°
N9C8H8126.8°125.0°
N9C1'C2'107.0°110.6°
N9C1'O4'110.1°110.6°
N9C1'H1'112.4°110.5°
N7C8H8126.8°125.0°
O3BVBO2B89.6°90.0°
O3BVBO3A170.8°180.0°
O3BVBO1B90.0°90.0°
O3BVBO4B86.1°90.0°
VBO3BH3B109.5°114.0°
O2'C2'C3'112.2°110.9°
O2'C2'C1'111.4°110.9°
C2'O2'H2'109.5°114.0°
O2'C2'HA111.5°110.8°
O2BVBO3A91.9°90.0°
O2BVBO1B116.7°120.0°
O2BVBO4B128.3°120.0°
VBO2BH2B109.5°114.0°
O3'C3'C4'105.5°110.5°
O3'C3'C2'113.1°110.5°
C3'O3'H3'109.5°114.0°
O3'C3'HB112.4°110.4°
C4'C3'C2'101.4°104.2°
C3'C4'C5'108.6°109.9°
C3'C4'O4'107.0°107.3°
C4'C3'HB111.5°110.5°
C3'C4'H4'110.7°109.9°
C3'C2'C1'99.6°102.1°
C3'C2'HA111.1°110.9°
C2'C3'HB112.2°110.6°
C5'C4'O4'107.1°109.9°
C4'C5'O5'109.4°109.5°
C5'C4'H4'111.1°109.9°
C4'C5'H5'1109.5°109.4°
C4'C5'H5'2109.5°109.5°
C4'O4'C1'105.9°107.0°
O4'C4'H4'112.3°110.0°
C5'O5'PA130.2°123.0°
O5'C5'H5'1109.5°109.5°
O5'C5'H5'2109.5°109.5°
O5'PAO1A106.5°109.5°
O5'PAO2A105.3°109.5°
O5'PAO3A104.5°109.4°
O1APAO2A113.5°109.5°
O1APAO3A119.1°109.5°
O2APAO3A106.9°109.5°
PAO2AHOA109.5°114.0°
PAO3AVB142.7°114.0°
O3AVBO1B97.4°90.0°
O3AVBO4B85.9°90.0°
O1BVBO4B114.8°120.0°
VBO1BH1B109.5°114.0°
VBO4BH4B109.5°114.0°
C2'C1'O4'101.8°103.5°
C1'C2'HA110.5°110.9°
C2'C1'H1'111.6°110.6°
O4'C1'H1'113.4°110.7°
H61NN6H62N109.4°119.9°
H5'1C5'H5'2109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3H2180.0°179.7°
N1C2N3C41.3°0.0°
C2N1C6C52.7°0.1°
C2N1C6N6178.9°180.0°
C2N3C4C51.1°0.0°
C2N3C4N9179.1°180.0°
N3C2N1C62.1°0.0°
C5C4N9N3178.3°180.0°
C4C5C6N7178.0°180.0°
C4C5C6N12.4°0.0°
C4C5C6N6179.2°180.0°
C5C4N9C81.0°0.0°
C5C4N9C1'177.8°180.0°
C4C5N7C81.3°0.0°
N9C4C5C6179.9°180.0°
N9C4C5N71.4°0.0°
C4N9C8C1'176.8°180.0°
C4N9C8N70.2°0.0°
C4N9C1'C2'121.5°85.0°
C4N9C1'O4'128.7°160.9°
C4N9C8H8179.8°179.9°
C4N9C1'H1'1.3°37.9°
N3C4C5C61.6°0.0°
N3C4C5N7180.0°180.0°
N3C4N9C8179.2°180.0°
N3C4N9C1'3.9°0.0°
C4N3C2H2178.7°179.7°
C5C6N1N6178.4°180.0°
C6C5N7C8179.4°180.0°
C5C6N6H61N178.4°0.0°
C5C6N6H62N58.4°180.0°
N7C5C6N1179.6°180.0°
N7C5C6N61.2°0.0°
C5N7C8N90.7°0.0°
C5N7C8H8179.3°180.0°
C6N1C2H2177.9°179.7°
N1C6N6H61N0.0°180.0°
N1C6N6H62N120.0°0.0°
C6N6H61NH62N120.0°179.9°
N9C8N7H8180.0°179.9°
C8N9C1'C2'54.9°95.0°
C8N9C1'O4'54.9°19.1°
C8N9C1'H1'177.7°142.1°
C1'N9C8N7177.0°180.0°
N9C1'C2'O2'76.4°86.3°
N9C1'C2'C3'165.1°155.5°
N9C1'O4'C4'153.2°158.5°
N9C1'C2'O4'115.5°118.5°
N9C1'C2'H1'123.3°122.8°
N9C1'O4'H1'126.9°122.9°
C1'N9C8H83.0°0.1°
N9C1'C2'HA48.1°37.3°
O3BVBO2BO3A170.9°180.0°
O3BVBO2BO1B89.8°90.0°
O3BVBO2BO4B84.7°90.0°
O3BVBO3APA3.7°112.8°
O3BVBO3AO1B143.7°172.8°
O3BVBO3AO4B29.3°52.8°
O3BVBO1BO4B85.7°90.0°
O3BVBO1BH1B180.0°90.0°
O3BVBO2BH2B180.0°0.0°
O3BVBO4BH4B180.0°89.9°
O2'C2'C3'O3'43.9°20.4°
O2'C2'C3'C4'156.3°139.1°
O2'C2'C3'C1'117.9°118.2°
O2'C2'C3'HA125.6°123.6°
O2'C2'C1'HA124.5°123.6°
O2'C2'C1'O4'168.1°155.2°
O2'C2'C3'HB84.6°102.2°
O2'C2'C1'H1'46.9°36.6°
O2BVBO3APA95.3°180.0°
O2BVBO3AO1B117.3°120.0°
O2BVBO3AO4B128.3°120.0°
O2BVBO1BO4B175.2°179.9°
O2BVBO3BH3B180.0°180.0°
O2BVBO1BH1B90.5°0.0°
O2BVBO4BH4B93.6°0.1°
O3'C3'C4'C2'118.1°118.7°
O3'C3'C4'HB122.3°122.5°
O3'C3'C2'HB128.5°122.5°
O3'C3'C4'C5'142.8°119.9°
O3'C3'C4'O4'101.9°120.7°
O3'C3'C2'C1'74.0°97.8°
O3'C3'C2'HA169.5°143.9°
O3'C3'C4'H4'20.7°1.2°
C4'C3'C2'HB119.1°118.8°
C3'C4'C5'O4'115.2°117.8°
C3'C4'C5'H4'121.9°121.1°
C3'C4'O4'H4'121.6°119.5°
C3'C4'C5'O5'68.4°175.0°
C4'C3'C2'C1'38.4°20.9°
C3'C4'O4'C1'15.4°26.5°
C4'C3'C2'HA78.1°97.4°
C4'C3'O3'H3'180.0°179.9°
C3'C4'C5'H5'151.6°55.0°
C3'C4'C5'H5'2171.6°65.0°
C2'C3'C4'C5'99.1°121.4°
C2'C3'C4'O4'16.2°2.0°
C3'C2'C1'HA117.0°118.2°
C3'C2'C1'O4'49.6°37.0°
C3'C2'O2'H2'180.0°61.5°
C2'C3'O3'H3'70.1°65.2°
C2'C3'C4'H4'138.8°117.5°
C3'C2'C1'H1'71.7°81.6°
C5'C4'O4'H4'122.1°121.1°
C4'C5'O5'H5'1120.0°120.0°
C4'C5'O5'H5'2120.0°120.0°
C4'C5'O5'PA156.7°180.0°
C5'C4'O4'C1'131.6°145.9°
C5'C4'C3'HB20.5°2.6°
C4'C5'H5'1H5'2120.0°120.0°
O4'C4'C5'O5'176.4°67.2°
C4'O4'C1'C2'40.0°40.0°
O4'C4'C3'HB135.8°116.8°
O4'C4'C5'H5'163.5°172.9°
O4'C4'C5'H5'256.4°52.9°
C4'O4'C1'H1'80.0°78.5°
C5'O5'PAO1A50.0°55.0°
C5'O5'PAO2A70.7°65.0°
C5'O5'PAO3A176.8°175.0°
O5'C5'C4'H4'53.5°54.0°
O5'C5'H5'1H5'2120.0°120.1°
O5'PAO1AO2A115.3°120.0°
O5'PAO1AO3A117.5°120.0°
O5'PAO2AO3A110.7°120.0°
O5'PAO3AVB108.8°180.0°
O5'PAO2AHOA116.0°60.0°
PAO5'C5'H5'136.7°60.0°
PAO5'C5'H5'283.3°60.0°
O1APAO2AO3A133.3°120.0°
O1APAO3AVB132.7°60.0°
O1APAO2AHOA0.0°180.0°
O2APAO3AVB2.5°60.0°
PAO3AVBO1B147.5°60.0°
PAO3AVBO4B33.0°60.0°
O3APAO2AHOA133.3°60.0°
O3AVBO1BO4B88.9°90.0°
O3AVBO3BH3B80.8°112.7°
O3AVBO1BH1B5.4°90.0°
O3AVBO2BH2B9.0°180.0°
O3AVBO4BH4B4.5°90.1°
O1BVBO3BH3B63.3°60.0°
O1BVBO2BH2B90.2°90.0°
O1BVBO4BH4B91.8°179.9°
O4BVBO3BH3B51.5°60.0°
O4BVBO1BH1B94.3°180.0°
O4BVBO2BH2B95.3°90.1°
C2'C1'O4'H1'120.0°118.6°
C1'C2'O2'H2'69.3°174.2°
C1'C2'C3'HB157.5°139.6°
O4'C1'C2'HA67.4°81.2°
C1'O4'C4'H4'106.3°93.0°
H2'O2'C2'HA54.6°62.1°
HAC2'C3'HB41.0°21.4°
HAC2'C1'H1'171.4°160.2°
H3'O3'C3'HB58.3°57.4°
HBC3'C4'H4'101.6°123.6°
H4'C4'C5'H5'1173.5°66.0°
H4'C4'C5'H5'266.5°174.0°

223532

PDB entries from 2024-08-07

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