4N9
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
S1 | C1 | doub | 1.71Å | 1.70Å | |
CB | CA | sing | 1.54Å | 1.48Å | |
CB | CG | sing | 1.55Å | 1.52Å | |
CA | C | sing | 1.51Å | 1.46Å | |
CA | N | sing | 1.47Å | 1.51Å | |
N1 | C10 | trip | 1.14Å | 1.20Å | |
C | O | doub | 1.21Å | 1.26Å | |
CG | CD | sing | 1.55Å | 1.48Å | |
C6 | C5 | doub | 1.38Å | 1.39Å | Aromatic |
C6 | C7 | sing | 1.40Å | 1.41Å | Aromatic |
C10 | C7 | sing | 1.43Å | 1.31Å | |
N | C1 | sing | 1.35Å | 1.28Å | |
N | CD | sing | 1.47Å | 1.45Å | |
C5 | C4 | sing | 1.38Å | 1.42Å | Aromatic |
C1 | N2 | sing | 1.35Å | 1.37Å | |
C7 | C8 | doub | 1.40Å | 1.35Å | Aromatic |
C4 | C3 | sing | 1.51Å | 1.48Å | |
C4 | C9 | doub | 1.38Å | 1.38Å | Aromatic |
C8 | C9 | sing | 1.38Å | 1.40Å | Aromatic |
N2 | C3 | sing | 1.46Å | 1.43Å | |
C3 | H2 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C5 | H4 | sing | 1.08Å | 1.08Å | |
C6 | H5 | sing | 1.08Å | 1.08Å | |
C8 | H6 | sing | 1.08Å | 1.08Å | |
C9 | H7 | sing | 1.08Å | 1.08Å | |
N2 | H8 | sing | 0.97Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG1 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | HD1 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
S1 | C1 | N | 122.1° | 120.0° |
S1 | C1 | N2 | 124.4° | 120.0° |
CA | CB | CG | 106.1° | 102.9° |
CB | CA | C | 98.9° | 109.9° |
CB | CA | N | 108.9° | 107.3° |
CB | CA | HA | 111.4° | 110.0° |
CA | CB | HB2 | 110.3° | 110.7° |
CA | CB | HB1 | 110.3° | 110.8° |
CB | CG | CD | 102.3° | 101.7° |
CG | CB | HB2 | 110.3° | 110.7° |
CG | CB | HB1 | 110.3° | 110.7° |
CB | CG | HG2 | 111.3° | 111.0° |
CB | CG | HG1 | 111.2° | 111.0° |
C | CA | N | 114.2° | 109.8° |
CA | C | O | 124.2° | 120.0° |
C | CA | HA | 111.8° | 109.8° |
CA | C | OXT | 118.6° | 120.0° |
CA | N | C1 | 125.6° | 125.7° |
CA | N | CD | 103.5° | 108.7° |
N | CA | HA | 111.0° | 109.9° |
N1 | C10 | C7 | 179.3° | 180.0° |
O | C | OXT | 114.3° | 120.0° |
CG | CD | N | 110.2° | 104.9° |
CD | CG | HG2 | 111.2° | 111.1° |
CD | CG | HG1 | 111.2° | 110.8° |
CG | CD | HD2 | 109.3° | 110.4° |
CG | CD | HD1 | 109.3° | 110.2° |
C5 | C6 | C7 | 123.6° | 119.8° |
C6 | C5 | C4 | 115.4° | 120.2° |
C6 | C5 | H4 | 122.3° | 119.9° |
C5 | C6 | H5 | 118.2° | 120.1° |
C6 | C7 | C10 | 119.2° | 120.2° |
C6 | C7 | C8 | 119.5° | 119.7° |
C7 | C6 | H5 | 118.2° | 120.1° |
C10 | C7 | C8 | 121.3° | 120.2° |
C1 | N | CD | 129.9° | 125.6° |
N | C1 | N2 | 113.5° | 120.1° |
N | CD | HD2 | 109.3° | 110.4° |
N | CD | HD1 | 109.3° | 110.4° |
C5 | C4 | C3 | 122.4° | 119.9° |
C5 | C4 | C9 | 120.7° | 120.3° |
C4 | C5 | H4 | 122.3° | 119.9° |
C1 | N2 | C3 | 128.4° | 120.0° |
C1 | N2 | H8 | 115.8° | 120.0° |
C7 | C8 | C9 | 118.9° | 119.9° |
C7 | C8 | H6 | 120.6° | 120.0° |
C3 | C4 | C9 | 116.9° | 119.8° |
C4 | C3 | N2 | 116.1° | 109.5° |
C4 | C3 | H2 | 107.8° | 109.4° |
C4 | C3 | H3 | 107.8° | 109.5° |
C4 | C9 | C8 | 121.7° | 120.2° |
C4 | C9 | H7 | 119.1° | 119.9° |
C9 | C8 | H6 | 120.6° | 120.1° |
C8 | C9 | H7 | 119.2° | 120.0° |
N2 | C3 | H2 | 107.8° | 109.5° |
N2 | C3 | H3 | 107.8° | 109.5° |
C3 | N2 | H8 | 115.8° | 120.0° |
H2 | C3 | H3 | 109.5° | 109.5° |
HB2 | CB | HB1 | 109.5° | 110.7° |
HG2 | CG | HG1 | 109.5° | 110.9° |
HD2 | CD | HD1 | 109.5° | 110.4° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
S1 | C1 | N | CA | 15.5° | 0.3° |
S1 | C1 | N | N2 | 176.7° | 180.0° |
S1 | C1 | N | CD | 150.8° | 180.0° |
S1 | C1 | N2 | C3 | 8.3° | 0.0° |
S1 | C1 | N2 | H8 | 171.7° | 179.9° |
CA | CB | CG | HB2 | 119.5° | 118.4° |
CA | CB | CG | HB1 | 119.4° | 118.4° |
CB | CA | C | N | 115.5° | 117.9° |
CB | CA | C | HA | 117.5° | 121.2° |
CB | CA | N | HA | 123.0° | 119.6° |
CB | CA | C | O | 92.0° | 99.3° |
CA | CB | CG | CD | 24.8° | 35.3° |
CB | CA | N | C1 | 161.8° | 178.9° |
CB | CA | N | CD | 7.4° | 0.8° |
CA | CB | HB2 | HB1 | 121.5° | 123.3° |
CA | CB | CG | HG2 | 143.7° | 153.6° |
CA | CB | CG | HG1 | 94.0° | 82.6° |
CB | CA | C | OXT | 108.2° | 81.0° |
CG | CB | CA | C | 130.8° | 141.6° |
CG | CB | CA | N | 11.2° | 22.2° |
CB | CG | CD | HG2 | 118.9° | 118.2° |
CB | CG | CD | HG1 | 118.8° | 118.1° |
CB | CG | CD | N | 31.1° | 36.7° |
CG | CB | CA | HA | 111.5° | 97.3° |
CG | CB | HB2 | HB1 | 121.6° | 123.2° |
CB | CG | HG2 | HG1 | 123.4° | 123.9° |
CB | CG | CD | HD2 | 89.0° | 155.6° |
CB | CG | CD | HD1 | 151.2° | 82.1° |
C | CA | N | HA | 127.4° | 121.0° |
CA | C | O | OXT | 160.6° | 179.8° |
C | CA | N | C1 | 88.7° | 61.7° |
C | CA | N | CD | 102.1° | 118.6° |
C | CA | CB | HB2 | 11.3° | 23.3° |
C | CA | CB | HB1 | 109.8° | 100.0° |
CA | C | OXT | HXT | 161.7° | 179.7° |
N | CA | C | O | 23.5° | 18.6° |
CA | N | CD | CG | 24.4° | 23.8° |
CA | N | C1 | CD | 166.3° | 179.7° |
CA | N | C1 | N2 | 167.8° | 179.7° |
N | CA | CB | HB2 | 108.2° | 96.1° |
N | CA | CB | HB1 | 130.7° | 140.6° |
CA | N | CD | HD2 | 95.8° | 142.7° |
CA | N | CD | HD1 | 144.5° | 94.9° |
N | CA | C | OXT | 136.3° | 161.2° |
N1 | C10 | C7 | C6 | 158.2° | 23.8° |
N1 | C10 | C7 | C8 | 21.4° | 156.2° |
O | C | CA | HA | 150.5° | 139.6° |
O | C | OXT | HXT | 0.0° | 0.0° |
CG | CD | N | C1 | 144.2° | 155.9° |
CG | CD | N | HD2 | 120.1° | 118.9° |
CG | CD | N | HD1 | 120.1° | 118.7° |
CD | CG | CB | HB2 | 94.7° | 83.1° |
CD | CG | CB | HB1 | 144.3° | 153.7° |
CD | CG | HG2 | HG1 | 123.3° | 123.7° |
CG | CD | HD2 | HD1 | 119.7° | 122.1° |
C5 | C6 | C7 | H5 | 180.0° | 179.9° |
C5 | C6 | C7 | C10 | 179.9° | 180.0° |
C6 | C5 | C4 | H4 | 180.0° | 179.9° |
C5 | C6 | C7 | C8 | 0.5° | 0.0° |
C6 | C5 | C4 | C3 | 177.0° | 180.0° |
C6 | C5 | C4 | C9 | 4.7° | 0.3° |
C6 | C7 | C10 | C8 | 179.6° | 180.0° |
C7 | C6 | C5 | C4 | 2.2° | 0.0° |
C6 | C7 | C8 | C9 | 1.2° | 0.2° |
C7 | C6 | C5 | H4 | 177.8° | 180.0° |
C6 | C7 | C8 | H6 | 178.8° | 180.0° |
C10 | C7 | C8 | C9 | 179.2° | 179.7° |
C10 | C7 | C6 | H5 | 0.1° | 0.1° |
C10 | C7 | C8 | H6 | 0.8° | 0.0° |
N | C1 | N2 | C3 | 168.3° | 180.0° |
N | C1 | N2 | H8 | 11.7° | 0.1° |
C1 | N | CA | HA | 38.7° | 59.3° |
C1 | N | CD | HD2 | 95.6° | 37.0° |
C1 | N | CD | HD1 | 24.1° | 85.4° |
CD | N | C1 | N2 | 25.9° | 0.0° |
CD | N | CA | HA | 130.5° | 120.4° |
N | CD | CG | HG2 | 150.0° | 154.9° |
N | CD | CG | HG1 | 87.7° | 81.4° |
N | CD | HD2 | HD1 | 119.6° | 122.3° |
C5 | C4 | C3 | C9 | 178.3° | 179.7° |
C5 | C4 | C9 | C8 | 5.7° | 0.5° |
C5 | C4 | C3 | N2 | 15.9° | 89.7° |
C5 | C4 | C3 | H2 | 136.9° | 30.4° |
C5 | C4 | C3 | H3 | 105.1° | 150.3° |
C4 | C5 | C6 | H5 | 177.8° | 179.9° |
C5 | C4 | C9 | H7 | 174.3° | 179.7° |
C1 | N2 | C3 | C4 | 89.6° | 180.0° |
C1 | N2 | C3 | H8 | 180.0° | 179.9° |
C1 | N2 | C3 | H2 | 149.5° | 60.0° |
C1 | N2 | C3 | H3 | 31.4° | 60.0° |
C7 | C8 | C9 | C4 | 3.8° | 0.5° |
C7 | C8 | C9 | H6 | 180.0° | 179.8° |
C8 | C7 | C6 | H5 | 179.5° | 180.0° |
C7 | C8 | C9 | H7 | 176.2° | 179.7° |
C3 | C4 | C9 | C8 | 175.9° | 179.8° |
C4 | C3 | N2 | H2 | 121.0° | 120.0° |
C4 | C3 | N2 | H3 | 121.0° | 120.0° |
C4 | C3 | H2 | H3 | 117.0° | 120.0° |
C3 | C4 | C5 | H4 | 3.0° | 0.1° |
C3 | C4 | C9 | H7 | 4.0° | 0.0° |
C4 | C3 | N2 | H8 | 90.4° | 0.1° |
C4 | C9 | C8 | H7 | 180.0° | 179.8° |
C9 | C4 | C3 | N2 | 162.4° | 90.0° |
C9 | C4 | C3 | H2 | 41.4° | 150.0° |
C9 | C4 | C3 | H3 | 76.6° | 30.0° |
C9 | C4 | C5 | H4 | 175.3° | 179.8° |
C4 | C9 | C8 | H6 | 176.1° | 179.7° |
N2 | C3 | H2 | H3 | 117.0° | 120.0° |
H2 | C3 | N2 | H8 | 30.6° | 120.1° |
H3 | C3 | N2 | H8 | 148.7° | 119.9° |
H4 | C5 | C6 | H5 | 2.2° | 0.0° |
H6 | C8 | C9 | H7 | 3.8° | 0.1° |
HA | CA | CB | HB2 | 129.0° | 144.3° |
HA | CA | CB | HB1 | 7.9° | 21.0° |
HA | CA | C | OXT | 9.3° | 40.2° |
HB2 | CB | CG | HG2 | 24.2° | 35.2° |
HB2 | CB | CG | HG1 | 146.5° | 159.0° |
HB1 | CB | CG | HG2 | 96.9° | 88.0° |
HB1 | CB | CG | HG1 | 25.5° | 35.8° |
HG2 | CG | CD | HD2 | 29.9° | 86.2° |
HG2 | CG | CD | HD1 | 89.9° | 36.1° |
HG1 | CG | CD | HD2 | 152.2° | 37.6° |
HG1 | CG | CD | HD1 | 32.4° | 159.8° |