4LM
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O1 | doub | 1.21Å | 1.19Å | |
| C | CA | sing | 1.48Å | 1.49Å | |
| C | O2 | sing | 1.35Å | 1.25Å | |
| N | CA | sing | 1.37Å | 1.37Å | |
| N | C4A | doub | 1.30Å | 1.30Å | |
| P | OP1 | doub | 1.48Å | 1.50Å | |
| P | OP2 | sing | 1.61Å | 1.50Å | |
| P | OP3 | sing | 1.61Å | 1.49Å | |
| P | OP4 | sing | 1.61Å | 1.64Å | |
| N1 | C2 | doub | 1.32Å | 1.34Å | Aromatic |
| N1 | C6 | sing | 1.32Å | 1.34Å | Aromatic |
| C2 | C3 | sing | 1.39Å | 1.39Å | Aromatic |
| C2 | C2A | sing | 1.51Å | 1.51Å | |
| C3 | O3 | sing | 1.36Å | 1.35Å | |
| C3 | C4 | doub | 1.41Å | 1.40Å | Aromatic |
| C4 | C5 | sing | 1.40Å | 1.39Å | Aromatic |
| C4 | C4A | sing | 1.47Å | 1.50Å | |
| C5 | C6 | doub | 1.38Å | 1.40Å | Aromatic |
| C5 | C5A | sing | 1.51Å | 1.52Å | |
| CA | CB | doub | 1.35Å | 1.36Å | |
| CB | CG | sing | 1.51Å | 1.51Å | |
| C5A | OP4 | sing | 1.43Å | 1.43Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| CB | HB | sing | 1.08Å | 1.08Å | |
| CG | HG | sing | 1.09Å | 1.10Å | |
| CG | HGA | sing | 1.09Å | 1.10Å | |
| CG | HGB | sing | 1.09Å | 1.10Å | |
| C2A | H2A | sing | 1.09Å | 1.10Å | |
| C2A | H2A1 | sing | 1.09Å | 1.10Å | |
| C2A | H2A2 | sing | 1.09Å | 1.10Å | |
| C4A | H4A | sing | 1.08Å | 1.08Å | |
| C5A | H5A | sing | 1.09Å | 1.10Å | |
| C5A | H5A1 | sing | 1.09Å | 1.10Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| O2 | H2 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1 | C | CA | 119.3° | 120.0° |
| O1 | C | O2 | 118.9° | 119.9° |
| CA | C | O2 | 121.7° | 120.0° |
| C | CA | N | 118.8° | 120.0° |
| C | CA | CB | 124.3° | 120.0° |
| C | O2 | H2 | 109.5° | 117.1° |
| CA | N | C4A | 129.0° | 120.0° |
| N | CA | CB | 116.8° | 120.0° |
| N | C4A | C4 | 120.5° | 120.0° |
| N | C4A | H4A | 119.8° | 120.0° |
| OP1 | P | OP2 | 113.9° | 109.5° |
| OP1 | P | OP3 | 114.3° | 109.5° |
| OP1 | P | OP4 | 102.8° | 109.5° |
| OP2 | P | OP3 | 114.8° | 109.4° |
| OP2 | P | OP4 | 102.1° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP3 | P | OP4 | 107.2° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| P | OP4 | C5A | 120.3° | 123.0° |
| C2 | N1 | C6 | 119.4° | 122.2° |
| N1 | C2 | C3 | 120.1° | 120.8° |
| N1 | C2 | C2A | 121.4° | 119.6° |
| N1 | C6 | C5 | 122.5° | 121.1° |
| N1 | C6 | H6 | 118.8° | 119.4° |
| C3 | C2 | C2A | 118.6° | 119.6° |
| C2 | C3 | O3 | 117.1° | 120.6° |
| C2 | C3 | C4 | 122.1° | 118.8° |
| C2 | C2A | H2A | 109.5° | 109.5° |
| C2 | C2A | H2A1 | 109.5° | 109.5° |
| C2 | C2A | H2A2 | 109.5° | 109.5° |
| O3 | C3 | C4 | 120.8° | 120.6° |
| C3 | O3 | HO3 | 109.5° | 114.0° |
| C3 | C4 | C5 | 116.3° | 118.1° |
| C3 | C4 | C4A | 121.4° | 121.0° |
| C5 | C4 | C4A | 121.8° | 121.0° |
| C4 | C5 | C6 | 119.5° | 119.1° |
| C4 | C5 | C5A | 122.5° | 120.5° |
| C4 | C4A | H4A | 119.7° | 120.1° |
| C6 | C5 | C5A | 118.0° | 120.4° |
| C5 | C6 | H6 | 118.7° | 119.5° |
| C5 | C5A | OP4 | 110.4° | 109.5° |
| C5 | C5A | H5A | 109.2° | 109.5° |
| C5 | C5A | H5A1 | 109.2° | 109.5° |
| CA | CB | CG | 125.4° | 120.0° |
| CA | CB | HB | 117.3° | 120.0° |
| CG | CB | HB | 117.3° | 120.0° |
| CB | CG | HG | 109.5° | 109.5° |
| CB | CG | HGA | 109.5° | 109.4° |
| CB | CG | HGB | 109.5° | 109.5° |
| OP4 | C5A | H5A | 109.2° | 109.4° |
| OP4 | C5A | H5A1 | 109.2° | 109.4° |
| HG | CG | HGA | 109.4° | 109.5° |
| HG | CG | HGB | 109.4° | 109.5° |
| HGA | CG | HGB | 109.5° | 109.5° |
| H2A | C2A | H2A1 | 109.5° | 109.4° |
| H2A | C2A | H2A2 | 109.5° | 109.5° |
| H2A1 | C2A | H2A2 | 109.4° | 109.5° |
| H5A | C5A | H5A1 | 109.8° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1 | C | CA | O2 | 179.1° | 179.8° |
| O1 | C | CA | N | 152.2° | 5.5° |
| O1 | C | CA | CB | 29.8° | 174.5° |
| O1 | C | O2 | H2 | 0.0° | 0.0° |
| C | CA | N | CB | 178.1° | 180.0° |
| C | CA | N | C4A | 178.0° | 47.6° |
| C | CA | CB | CG | 2.0° | 0.1° |
| C | CA | CB | HB | 178.0° | 179.9° |
| CA | C | O2 | H2 | 179.1° | 179.8° |
| O2 | C | CA | N | 26.9° | 174.7° |
| O2 | C | CA | CB | 151.1° | 5.3° |
| CA | N | C4A | C4 | 177.4° | 175.6° |
| N | CA | CB | CG | 180.0° | 180.0° |
| N | CA | CB | HB | 0.0° | 0.0° |
| CA | N | C4A | H4A | 2.6° | 4.4° |
| N | C4A | C4 | C3 | 17.7° | 0.1° |
| N | C4A | C4 | C5 | 154.0° | 179.9° |
| N | C4A | C4 | H4A | 180.0° | 179.9° |
| C4A | N | CA | CB | 3.9° | 132.4° |
| OP1 | P | OP2 | OP3 | 134.4° | 120.0° |
| OP1 | P | OP2 | OP4 | 110.0° | 120.0° |
| OP1 | P | OP3 | OP4 | 113.2° | 120.0° |
| OP1 | P | OP4 | C5A | 179.7° | 55.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.0° |
| OP2 | P | OP3 | OP4 | 112.6° | 120.0° |
| OP2 | P | OP4 | C5A | 62.0° | 65.0° |
| OP2 | P | OP3 | HOP3 | 134.2° | 60.0° |
| OP3 | P | OP4 | C5A | 58.9° | 175.0° |
| OP3 | P | OP2 | HOP2 | 134.4° | 60.1° |
| P | OP4 | C5A | C5 | 157.2° | 180.0° |
| P | OP4 | C5A | H5A | 82.8° | 60.0° |
| P | OP4 | C5A | H5A1 | 37.2° | 59.9° |
| OP4 | P | OP2 | HOP2 | 110.0° | 59.9° |
| OP4 | P | OP3 | HOP3 | 113.2° | 180.0° |
| N1 | C2 | C3 | C2A | 179.5° | 179.9° |
| N1 | C2 | C3 | O3 | 179.9° | 180.0° |
| N1 | C2 | C3 | C4 | 2.4° | 0.1° |
| C2 | N1 | C6 | C5 | 0.2° | 0.0° |
| C2 | N1 | C6 | H6 | 179.8° | 179.9° |
| N1 | C2 | C2A | H2A | 0.0° | 90.0° |
| N1 | C2 | C2A | H2A1 | 120.0° | 150.0° |
| N1 | C2 | C2A | H2A2 | 120.0° | 30.0° |
| C6 | N1 | C2 | C3 | 0.5° | 0.1° |
| C6 | N1 | C2 | C2A | 179.9° | 180.0° |
| N1 | C6 | C5 | C4 | 1.8° | 0.0° |
| N1 | C6 | C5 | H6 | 180.0° | 180.0° |
| N1 | C6 | C5 | C5A | 179.4° | 180.0° |
| C2 | C3 | O3 | C4 | 177.6° | 180.0° |
| C2 | C3 | C4 | C5 | 3.8° | 0.0° |
| C2 | C3 | C4 | C4A | 175.9° | 180.0° |
| C2 | C3 | O3 | HO3 | 180.0° | 90.0° |
| C3 | C2 | C2A | H2A | 179.5° | 90.0° |
| C3 | C2 | C2A | H2A1 | 60.5° | 30.0° |
| C3 | C2 | C2A | H2A2 | 59.5° | 149.9° |
| C2A | C2 | C3 | O3 | 0.6° | 0.1° |
| C2A | C2 | C3 | C4 | 178.2° | 180.0° |
| C2 | C2A | H2A | H2A1 | 120.0° | 120.0° |
| C2 | C2A | H2A | H2A2 | 120.0° | 120.0° |
| C2 | C2A | H2A1 | H2A2 | 120.0° | 120.0° |
| O3 | C3 | C4 | C5 | 178.8° | 180.0° |
| O3 | C3 | C4 | C4A | 6.7° | 0.0° |
| C3 | C4 | C5 | C4A | 172.1° | 180.0° |
| C3 | C4 | C5 | C6 | 3.4° | 0.0° |
| C3 | C4 | C5 | C5A | 177.8° | 180.0° |
| C4 | C3 | O3 | HO3 | 2.4° | 90.0° |
| C3 | C4 | C4A | H4A | 162.3° | 180.0° |
| C4 | C5 | C6 | C5A | 178.9° | 180.0° |
| C4 | C5 | C5A | OP4 | 84.3° | 180.0° |
| C4 | C5 | C6 | H6 | 178.2° | 180.0° |
| C5 | C4 | C4A | H4A | 26.0° | 0.0° |
| C4 | C5 | C5A | H5A | 155.7° | 60.0° |
| C4 | C5 | C5A | H5A1 | 35.7° | 60.0° |
| C4A | C4 | C5 | C6 | 175.5° | 180.0° |
| C4A | C4 | C5 | C5A | 5.7° | 0.0° |
| C6 | C5 | C5A | OP4 | 94.6° | 0.0° |
| C6 | C5 | C5A | H5A | 25.4° | 120.0° |
| C6 | C5 | C5A | H5A1 | 145.5° | 120.0° |
| C5 | C5A | OP4 | H5A | 120.0° | 120.0° |
| C5 | C5A | OP4 | H5A1 | 120.0° | 120.1° |
| C5A | C5 | C6 | H6 | 0.6° | 0.1° |
| C5 | C5A | H5A | H5A1 | 119.7° | 120.0° |
| CA | CB | CG | HB | 180.0° | 180.0° |
| CA | CB | CG | HG | 180.0° | 180.0° |
| CA | CB | CG | HGA | 60.0° | 60.0° |
| CA | CB | CG | HGB | 60.0° | 59.9° |
| CB | CG | HG | HGA | 120.0° | 119.9° |
| CB | CG | HG | HGB | 120.0° | 120.0° |
| CB | CG | HGA | HGB | 120.0° | 119.9° |
| OP4 | C5A | H5A | H5A1 | 119.6° | 119.9° |
| HB | CB | CG | HG | 0.0° | 0.0° |
| HB | CB | CG | HGA | 120.0° | 120.0° |
| HB | CB | CG | HGB | 120.0° | 120.1° |
| HG | CG | HGA | HGB | 119.9° | 120.1° |
| H2A | C2A | H2A1 | H2A2 | 120.0° | 120.0° |
