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SummaryGeometryRelated PDB entries

4DJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C38C40doub1.38Å1.38ÅAromatic
C38C36sing1.39Å1.38ÅAromatic
O33C30sing1.43Å1.36Å
C40C42sing1.39Å1.39ÅAromatic
C30C27sing1.53Å1.51Å
C36C35doub1.38Å1.39ÅAromatic
C24C27sing1.53Å1.52Å
C24N23sing1.46Å1.46Å
C42N43sing1.37Å1.36ÅAromatic
C42C48doub1.41Å1.40ÅAromatic
C35C48sing1.41Å1.41ÅAromatic
C35N23sing1.39Å1.42Å
N43N45sing1.40Å1.36ÅAromatic
C48C46sing1.41Å1.41ÅAromatic
N23C21sing1.39Å1.40Å
N06C07doub1.30Å1.31ÅAromatic
N06N05sing1.40Å1.38ÅAromatic
C07C09sing1.46Å1.41ÅAromatic
N45C46doub1.30Å1.32ÅAromatic
N05C01sing1.47Å1.46Å
N05C53sing1.37Å1.36ÅAromatic
C09C53doub1.41Å1.40ÅAromatic
C09C10sing1.40Å1.40ÅAromatic
C21N22doub1.33Å1.34ÅAromatic
C21C19sing1.40Å1.39ÅAromatic
N22C15sing1.32Å1.34ÅAromatic
C53C51sing1.39Å1.38ÅAromatic
C10C12doub1.38Å1.39ÅAromatic
C19C17doub1.38Å1.37ÅAromatic
C51C49doub1.37Å1.38ÅAromatic
C12C49sing1.40Å1.40ÅAromatic
C12N13sing1.40Å1.41Å
C15N13sing1.39Å1.35Å
C15N16doub1.32Å1.34ÅAromatic
C17N16sing1.32Å1.34ÅAromatic
C01H02sing1.09Å1.10Å
C01H04sing1.09Å1.10Å
C01H03sing1.09Å1.10Å
C07H08sing1.08Å1.08Å
C10H11sing1.08Å1.08Å
N13H14sing0.97Å1.00Å
C17H18sing1.08Å1.08Å
C19H20sing1.08Å1.08Å
C24H26sing1.09Å1.10Å
C24H25sing1.09Å1.10Å
C27H28sing1.09Å1.10Å
C27H29sing1.09Å1.10Å
C30H32sing1.09Å1.10Å
C30H31sing1.09Å1.10Å
O33H34sing0.97Å0.95Å
C36H37sing1.08Å1.08Å
C38H39sing1.08Å1.08Å
C40H41sing1.08Å1.08Å
N43H44sing0.97Å1.00Å
C46H47sing1.08Å1.08Å
C49H50sing1.08Å1.08Å
C51H52sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C40C38C36121.1°120.7°
C38C40C42118.4°120.0°
C40C38H39119.5°119.7°
C38C40H41120.8°120.0°
C38C36C35120.5°120.5°
C38C36H37119.8°119.8°
C36C38H39119.5°119.7°
O33C30C27115.1°109.5°
O33C30H32108.1°109.5°
O33C30H31108.0°109.5°
C30O33H34109.5°114.1°
C40C42N43131.9°133.6°
C40C42C48122.2°119.8°
C42C40H41120.8°120.0°
C30C27C24110.3°109.5°
C30C27H28109.2°109.4°
C30C27H29109.3°109.4°
C27C30H32108.1°109.5°
C27C30H31108.1°109.4°
C36C35C48119.9°119.5°
C36C35N23120.8°120.2°
C35C36H37119.7°119.7°
C27C24N23112.1°109.5°
C27C24H26108.8°109.4°
C27C24H25108.8°109.4°
C24C27H28109.3°109.5°
C24C27H29109.3°109.5°
C24N23C35114.2°120.0°
C24N23C21120.2°120.0°
N23C24H26108.8°109.5°
N23C24H25108.8°109.5°
N43C42C48105.9°106.6°
C42N43N45111.8°108.1°
C42N43H44124.1°126.0°
C42C48C35117.8°119.5°
C42C48C46104.9°106.9°
C48C35N23119.3°120.3°
C35C48C46137.2°133.5°
C35N23C21125.0°120.0°
N43N45C46105.9°109.7°
N45N43H44124.1°125.9°
C48C46N45111.5°108.7°
C48C46H47124.3°125.7°
N23C21N22116.9°120.5°
N23C21C19120.8°120.5°
C07N06N05105.5°110.1°
N06C07C09112.0°107.8°
N06C07H08124.0°126.1°
N06N05C01120.5°125.5°
N06N05C53111.4°109.0°
C07C09C53104.6°106.3°
C07C09C10136.1°133.9°
C09C07H08124.0°126.1°
N45C46H47124.2°125.6°
C01N05C53128.1°125.5°
N05C01H02109.5°109.4°
N05C01H04109.5°109.5°
N05C01H03109.4°109.5°
N05C53C09106.5°106.7°
N05C53C51131.5°133.6°
C53C09C10119.2°119.7°
C09C53C51122.0°119.6°
C09C10C12118.7°119.5°
C09C10H11120.6°120.3°
N22C21C19122.2°119.1°
C21N22C15116.8°120.6°
C21C19C17115.7°118.4°
C21C19H20122.1°120.8°
N22C15N13119.5°119.2°
N22C15N16125.7°121.6°
C53C51C49118.4°120.1°
C53C51H52120.8°120.0°
C10C12C49120.8°120.3°
C10C12N13122.7°119.8°
C12C10H11120.6°120.2°
C19C17N16123.8°119.3°
C19C17H18118.1°120.4°
C17C19H20122.1°120.8°
C51C49C12120.7°120.8°
C51C49H50119.7°119.6°
C49C51H52120.8°120.0°
C49C12N13116.3°119.8°
C12C49H50119.6°119.6°
C12N13C15130.4°120.0°
C12N13H14114.9°120.0°
N13C15N16114.8°119.2°
C15N13H14114.8°120.0°
C15N16C17115.6°121.0°
N16C17H18118.1°120.3°
H02C01H04109.5°109.5°
H02C01H03109.4°109.5°
H04C01H03109.5°109.5°
H26C24H25109.5°109.5°
H28C27H29109.5°109.5°
H32C30H31109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C40C38C36H39180.0°179.9°
C38C40C42H41180.0°179.9°
C40C38C36C353.4°0.0°
C38C40C42N43179.9°180.0°
C38C40C42C480.6°0.1°
C40C38C36H37176.6°179.9°
C36C38C40C421.3°0.1°
C38C36C35H37180.0°179.9°
C38C36C35C483.5°0.0°
C38C36C35N23176.1°179.7°
C36C38C40H41178.7°180.0°
O33C30C27H32120.8°120.1°
O33C30C27H31120.8°120.0°
O33C30C27C24169.6°180.0°
O33C30C27H2849.5°60.0°
O33C30C27H2970.3°60.0°
O33C30H32H31117.4°120.0°
C40C42N43C48179.6°179.9°
C40C42C48C350.5°0.1°
C40C42N43N45179.3°179.9°
C40C42C48C46178.9°179.9°
C42C40C38H39178.7°180.0°
C40C42N43H440.8°0.0°
C30C27C24H28120.1°120.0°
C30C27C24H29120.1°119.9°
C30C27C24N23180.0°180.0°
C30C27C24H2659.7°60.0°
C30C27C24H2559.6°60.0°
C30C27H28H29119.6°119.9°
C27C30H32H31117.5°119.9°
C27C30O33H34180.0°180.0°
C36C35N23C2475.5°89.7°
C36C35C48C421.6°0.0°
C36C35C48N23179.6°179.7°
C36C35C48C46176.2°180.0°
C36C35N23C21113.2°90.3°
C35C36C38H39176.6°180.0°
C27C24N23H26120.4°120.0°
C27C24N23H25120.4°120.0°
C27C24N23C3584.3°90.0°
C27C24N23C2187.4°90.0°
C27C24H26H25118.8°119.9°
C24C27H28H29119.7°120.1°
C24C27C30H3269.6°59.9°
C24C27C30H3148.8°60.0°
C24N23C35C48104.1°90.0°
C24N23C35C21171.2°180.0°
C24N23C21N222.1°175.0°
C24N23C21C19179.4°4.5°
N23C24H26H25118.8°120.1°
N23C24C27H2859.9°60.0°
N23C24C27H2959.9°60.0°
N43C42C48C35179.9°180.0°
C42N43N45H44180.0°180.0°
N43C42C48C461.5°0.0°
C42N43N45C460.3°0.0°
N43C42C40H410.1°0.1°
C42C48C35C46177.8°180.0°
C42C48C35N23178.0°179.7°
C48C42N43N451.2°0.0°
C42C48C46N451.4°0.0°
C48C42C40H41179.4°180.0°
C48C42N43H44178.8°180.0°
C42C48C46H47178.7°179.9°
C48C35N23C2167.1°90.0°
C35C48C46N45179.4°180.0°
C48C35C36H37176.5°180.0°
C35C48C46H470.7°0.1°
N23C35C48C464.2°0.3°
C35N23C21N22172.8°5.0°
C35N23C21C198.7°175.6°
C35N23C24H26155.3°30.0°
C35N23C24H2536.1°150.1°
N23C35C36H373.9°0.3°
N43N45C46C480.7°0.0°
N43N45C46H47179.4°179.9°
C48C46N45H47180.0°179.9°
N23C21N22C19178.5°179.4°
N23C21N22C15174.9°180.0°
N23C21C19C17174.4°179.7°
N23C21C19H205.6°0.2°
C21N23C24H2633.0°150.0°
C21N23C24H25152.3°30.0°
N06C07C09H08180.0°180.0°
C07N06N05C01179.2°180.0°
C07N06N05C530.4°0.2°
N06C07C09C532.0°0.2°
N06C07C09C10178.4°180.0°
N05N06C07C091.5°0.0°
N06N05C01C53178.5°179.8°
N06N05C53C090.8°0.4°
N06N05C53C51180.0°179.5°
N06N05C01H020.0°89.8°
N06N05C01H04120.0°30.2°
N06N05C01H03120.0°150.3°
N05N06C07H08178.5°179.9°
C07C09C53N051.6°0.4°
C07C09C53C10177.1°179.8°
C07C09C53C51179.1°179.6°
C07C09C10C12179.4°180.0°
C07C09C10H110.6°0.0°
C46N45N43H44179.6°180.0°
C01N05C53C09177.8°179.8°
C01N05C53C511.4°0.7°
N05C01H02H04120.0°120.0°
N05C01H02H03120.0°120.0°
N05C01H04H03120.0°120.0°
N05C53C09C51179.3°179.3°
N05C53C09C10178.8°179.8°
N05C53C51C49179.9°179.6°
C53N05C01H02178.5°90.0°
C53N05C01H0458.5°150.0°
C53N05C01H0361.5°29.9°
N05C53C51H520.1°0.7°
C53C09C10C123.4°0.3°
C09C53C51C490.8°0.6°
C53C09C07H08178.0°179.7°
C53C09C10H11176.6°179.7°
C09C53C51H52179.1°179.7°
C10C09C53C512.0°0.6°
C09C10C12H11180.0°180.0°
C09C10C12C493.8°0.0°
C09C10C12N13178.2°180.0°
C10C09C07H081.6°0.0°
N22C21C19C174.0°0.3°
C21N22C15N13179.2°179.7°
C21N22C15N161.6°0.6°
N22C21C19H20176.0°179.7°
C19C21N22C153.6°0.6°
C21C19C17H20180.0°180.0°
C21C19C17N162.5°0.0°
C21C19C17H18177.5°180.0°
N22C15N13C120.7°175.0°
N22C15N13N16177.8°179.7°
N22C15N16C170.1°0.3°
N22C15N13H14179.3°5.0°
C53C51C49H52180.0°179.7°
C53C51C49C121.2°0.3°
C53C51C49H50178.8°179.7°
C10C12C49C512.8°0.0°
C10C12C49N13174.7°180.0°
C10C12N13C1529.2°32.8°
C10C12N13H14150.8°147.2°
C10C12C49H50177.2°180.0°
C19C17N16C150.6°0.0°
C19C17N16H18180.0°179.9°
C51C49C12H50180.0°180.0°
C51C49C12N13177.5°180.0°
C49C12N13C15156.2°147.2°
C49C12C10H11176.1°180.0°
C49C12N13H1423.8°32.8°
C12C49C51H52178.7°180.0°
C12N13C15H14180.0°180.0°
C12N13C15N16177.1°5.3°
N13C12C10H111.8°0.0°
N13C12C49H502.5°0.0°
N13C15N16C17177.8°180.0°
N16C15N13H142.8°174.7°
C15N16C17H18179.4°180.0°
N16C17C19H20177.5°180.0°
H02C01H04H03120.0°120.0°
H18C17C19H202.5°0.1°
H26C24C27H28179.8°179.9°
H26C24C27H2960.5°60.0°
H25C24C27H2860.5°60.0°
H25C24C27H29179.7°180.0°
H28C27C30H32170.3°179.9°
H28C27C30H3171.3°60.0°
H29C27C30H3250.6°60.1°
H29C27C30H31168.9°180.0°
H32C30O33H3459.2°60.0°
H31C30O33H3459.2°60.0°
H37C36C38H393.4°0.0°
H39C38C40H411.3°0.1°
H50C49C51H521.3°0.0°

225946

PDB entries from 2024-10-09

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