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48Z

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PSP3sing2.12Å1.91Å
POP2sing1.61Å1.61Å
PO5sing1.61Å1.65Å
C1O1sing1.43Å1.43Å
C2C1sing1.54Å1.52Å
C2H2sing1.09Å1.10Å
F2C2sing1.40Å1.39Å
C3C2sing1.55Å1.52Å
C3O3sing1.43Å1.45Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C4C3sing1.55Å1.53Å
C4O4sing1.45Å1.45Å
C4H4sing1.09Å1.10Å
O4C1sing1.44Å1.44Å
C5C4sing1.53Å1.56Å
C5O5sing1.43Å1.43Å
C5H52sing1.09Å1.10Å
C5H51sing1.09Å1.10Å
OP1Pdoub1.48Å1.65Å
OP2HOP2sing0.97Å0.95Å
SP3HSP3sing1.35Å1.30Å
O1HO1sing0.97Å0.95Å
C1H1sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
SP3POP2110.9°109.5°
SP3PO5109.3°109.5°
SP3POP1110.2°109.5°
PSP3HSP3102.0°103.0°
OP2PO5109.9°109.5°
OP2POP1108.4°109.4°
POP2HOP2109.5°114.0°
PO5C5119.4°123.1°
O5POP1108.1°109.5°
O1C1C2138.8°109.9°
O1C1O4108.4°109.9°
C1O1HO1109.5°114.0°
O1C1H1100.9°109.8°
C1C2H2110.9°110.5°
C1C2F2110.3°110.5°
C1C2C3101.2°104.2°
C2C1O4101.8°107.5°
C2C1H1100.2°109.9°
H2C2F2113.0°110.4°
H2C2C3110.9°110.5°
F2C2C3109.9°110.6°
C2C3O3110.8°110.9°
C2C3H3110.6°110.8°
C2C3C4102.8°102.1°
O3C3H3111.8°110.8°
C3O3HO3109.5°114.0°
O3C3C4109.8°110.9°
H3C3C4110.6°110.9°
C3C4O4107.2°103.5°
C3C4H4110.2°110.6°
C3C4C5108.0°110.6°
O4C4H4111.3°110.6°
C4O4C1105.6°106.8°
O4C4C5110.2°110.6°
H4C4C5109.8°110.7°
O4C1H1100.8°109.9°
C4C5O5113.5°109.5°
C4C5H52108.5°109.5°
C4C5H51108.5°109.5°
O5C5H52108.4°109.4°
O5C5H51108.4°109.4°
H52C5H51109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
SP3POP2O5120.9°120.0°
SP3POP2OP1121.1°120.0°
SP3PO5OP1120.0°120.0°
SP3PO5C5160.1°65.0°
SP3POP2HOP2121.2°60.0°
OP2PO5OP1118.2°120.0°
OP2PO5C578.0°175.0°
OP2PSP3HSP3120.1°60.0°
PO5C5C4140.7°180.0°
PO5C5H5220.1°60.0°
PO5C5H5198.7°59.9°
O5POP2HOP2117.9°60.1°
O5PSP3HSP3118.6°180.0°
O1C1C2O4136.9°119.6°
O1C1C2H1119.7°120.9°
O1C1C2H226.3°1.2°
O1C1C2F2152.4°123.8°
O1C1C2C391.4°117.4°
O1C1O4C4109.5°93.0°
O1C1O4H1105.4°121.0°
C1C2H2F2124.5°122.6°
C1C2H2C3111.6°114.7°
C1C2F2C3110.8°114.8°
C1C2C3O385.9°139.1°
C1C2C3H3149.5°97.4°
C1C2C3C431.4°20.8°
C2C1O4C442.1°26.5°
C2C1O4H1102.9°119.5°
C2C1O1HO1180.0°179.7°
H2C2F2C3124.4°122.6°
H2C2C3O331.8°20.4°
H2C2C3H392.8°144.0°
H2C2C3C4149.1°97.8°
H2C2C1O4163.2°120.8°
H2C2C1H193.4°119.7°
F2C2C3O3157.5°102.2°
F2C2C3H332.9°21.4°
F2C2C3C485.3°139.6°
F2C2C1O470.8°116.7°
F2C2C1H132.6°2.8°
C2C3O3H3123.9°123.5°
C2C3O3C4112.9°112.7°
C2C3H3C4113.3°112.7°
C2C3O3HO3180.0°61.4°
C2C3C4O47.0°37.0°
C2C3C4H4128.3°81.5°
C3C2C1O445.5°2.1°
C2C3C4C5111.7°155.5°
C3C2C1H1148.9°121.6°
O3C3H3C4122.7°123.7°
O3C3C4O4111.0°155.3°
O3C3C4H410.3°36.7°
O3C3C4C5130.3°86.3°
H3C3O3HO356.0°62.2°
H3C3C4O4125.1°81.1°
H3C3C4H4113.6°160.4°
H3C3C4C56.4°37.4°
HO3O3C3C467.2°174.1°
C3C4O4H4120.6°118.5°
C3C4O4C5117.2°118.5°
C3C4H4C5118.8°122.9°
C3C4O4C122.1°40.1°
C3C4C5O5117.4°175.0°
C3C4C5H52122.0°55.0°
C3C4C5H513.2°65.0°
O4C4H4C5122.4°122.9°
O4C4C5O50.6°70.9°
O4C4C5H52121.2°169.1°
O4C4C5H51120.0°49.1°
C4O4C1H1145.1°146.0°
H4C4O4C198.6°78.4°
H4C4C5O5122.4°52.1°
H4C4C5H521.8°67.9°
H4C4C5H51117.0°172.1°
C1O4C4C5139.3°158.6°
O4C1O1HO144.8°61.7°
C4C5O5H52120.6°120.0°
C4C5O5H51120.6°120.0°
C4C5H52H51118.2°120.0°
O5C5H52H51118.1°119.9°
C5O5POP140.2°55.0°
OP1POP2HOP20.0°180.0°
OP1PSP3HSP30.0°60.0°
HO1O1C1H160.5°59.3°

248636

PDB entries from 2026-02-04

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