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48F

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3'C3'sing1.43Å1.43Å
O2'C2'sing1.43Å1.43Å
C3'C2'sing1.55Å1.52Å
C3'C4'sing1.54Å1.53Å
C2'C1'sing1.55Å1.52Å
C4'C5'sing1.53Å1.53Å
C4'O4'sing1.44Å1.43Å
C1'N9sing1.46Å1.48Å
C1'O4'sing1.44Å1.44Å
O2APAdoub1.48Å1.51Å
O4DC4Dsing1.43Å1.43Å
N3C2doub1.32Å1.35ÅAromatic
N3C4sing1.33Å1.36ÅAromatic
C2N1sing1.32Å1.35ÅAromatic
C5'O5'sing1.43Å1.41Å
N9C4sing1.37Å1.33ÅAromatic
N9C8sing1.36Å1.35ÅAromatic
C4C5doub1.41Å1.48ÅAromatic
O5'PAsing1.61Å1.61Å
PAO1Asing1.61Å1.52Å
PAO3Asing1.61Å1.63Å
N1C6doub1.33Å1.36ÅAromatic
C4DC3Dsing1.53Å1.53Å
C4DC5Dsing1.53Å1.53Å
C8N7doub1.30Å1.37ÅAromatic
C3DO3Dsing1.43Å1.44Å
C3DC2Dsing1.51Å1.52Å
C5C6sing1.41Å1.48ÅAromatic
C5N7sing1.35Å1.35ÅAromatic
C6N6sing1.38Å1.35Å
O5DC5Dsing1.43Å1.43Å
O5DPBsing1.61Å1.62Å
O3APBsing1.61Å1.63Å
C2DO2Ddoub1.21Å1.23Å
C2DC1Dsing1.51Å1.53Å
O1BPBdoub1.48Å1.52Å
PBO2Bsing1.61Å1.52Å
O1DC1Dsing1.43Å1.44Å
O1AH1sing0.97Å0.95Å
C5DH2sing1.09Å1.10Å
C5DH3sing1.09Å1.10Å
C4DH4sing1.09Å1.10Å
O4DH5sing0.97Å0.95Å
C3DH6sing1.09Å1.10Å
C1DH7sing1.09Å1.10Å
C1DH8sing1.09Å1.10Å
O1DH9sing0.97Å0.95Å
O3DH10sing0.97Å0.95Å
O2BH11sing0.97Å0.95Å
C5'H12sing1.09Å1.10Å
C5'H13sing1.09Å1.10Å
C4'H14sing1.09Å1.10Å
C1'H15sing1.09Å1.10Å
C2'H16sing1.09Å1.10Å
O2'H17sing0.97Å0.95Å
C3'H18sing1.09Å1.10Å
O3'H19sing0.97Å0.95Å
C8H20sing1.08Å1.08Å
N6H21sing0.97Å1.00Å
N6H22sing0.97Å1.00Å
C2H23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3'C3'C2'111.7°110.5°
O3'C3'C4'107.8°110.5°
O3'C3'H18111.6°110.6°
C3'O3'H19109.5°114.0°
O2'C2'C3'113.9°110.9°
O2'C2'C1'112.1°110.9°
O2'C2'H16110.6°110.8°
C2'O2'H17109.5°113.9°
C2'C3'C4'105.1°104.2°
C3'C2'C1'101.1°102.1°
C3'C2'H16109.3°110.9°
C2'C3'H18110.2°110.5°
C3'C4'C5'115.8°109.8°
C3'C4'O4'103.9°107.3°
C3'C4'H14106.6°110.0°
C4'C3'H18110.1°110.5°
C2'C1'N9116.9°110.6°
C2'C1'O4'102.1°103.5°
C2'C1'H15108.1°110.7°
C1'C2'H16109.4°110.9°
C5'C4'O4'115.6°109.9°
C4'C5'O5'112.7°109.4°
C4'C5'H12108.7°109.4°
C4'C5'H13108.7°109.5°
C5'C4'H14106.6°109.9°
C4'O4'C1'103.4°107.0°
O4'C4'H14107.8°109.9°
N9C1'O4'111.6°110.6°
C1'N9C4123.6°126.2°
C1'N9C8127.6°126.3°
N9C1'H15108.6°110.6°
O4'C1'H15109.2°110.6°
O2APAO5'111.7°109.5°
O2APAO1A118.6°109.5°
O2APAO3A113.6°109.5°
O4DC4DC3D107.1°109.5°
O4DC4DC5D109.7°109.5°
O4DC4DH4109.5°109.5°
C4DO4DH5109.5°114.0°
C2N3C4121.9°120.6°
N3C2N1121.9°122.5°
N3C2H23119.0°118.7°
N3C4N9134.6°134.9°
N3C4C5118.9°119.1°
C2N1C6122.4°121.2°
N1C2H23119.0°118.8°
C5'O5'PA123.0°123.0°
O5'C5'H12108.6°109.5°
O5'C5'H13108.7°109.5°
C4N9C8108.8°107.4°
N9C4C5106.5°106.0°
N9C8N7110.7°110.0°
N9C8H20124.6°125.0°
C4C5C6116.6°118.1°
C4C5N7106.7°107.1°
O5'PAO1A105.4°109.4°
O5'PAO3A99.8°109.5°
O1APAO3A105.8°109.5°
PAO1AH1109.5°114.0°
PAO3APB131.1°134.0°
N1C6C5118.2°118.4°
N1C6N6121.4°120.8°
C3DC4DC5D114.2°109.5°
C4DC3DO3D109.0°109.5°
C4DC3DC2D113.1°109.5°
C3DC4DH4108.2°109.5°
C4DC3DH6107.2°109.4°
C4DC5DO5D109.9°109.5°
C4DC5DH2109.3°109.4°
C4DC5DH3109.4°109.5°
C5DC4DH4108.1°109.4°
C8N7C5107.4°109.5°
N7C8H20124.6°125.0°
O3DC3DC2D111.5°109.5°
O3DC3DH6108.4°109.5°
C3DO3DH10109.5°114.0°
C3DC2DO2D119.2°120.0°
C3DC2DC1D121.0°120.0°
C2DC3DH6107.4°109.5°
C6C5N7136.7°134.7°
C5C6N6120.4°120.8°
C6N6H21109.5°120.0°
C6N6H22109.4°120.0°
C5DO5DPB124.9°123.0°
O5DC5DH2109.4°109.4°
O5DC5DH3109.3°109.5°
O5DPBO3A105.5°109.5°
O5DPBO1B108.1°109.5°
O5DPBO2B112.4°109.4°
O3APBO1B109.1°109.5°
O3APBO2B104.1°109.5°
O2DC2DC1D119.9°120.0°
C2DC1DO1D115.5°109.5°
C2DC1DH7107.9°109.5°
C2DC1DH8107.9°109.5°
O1BPBO2B117.0°109.5°
PBO2BH11109.5°114.0°
O1DC1DH7107.9°109.4°
O1DC1DH8107.9°109.5°
C1DO1DH9109.5°114.0°
H2C5DH3109.5°109.5°
H7C1DH8109.5°109.5°
H12C5'H13109.5°109.5°
H21N6H22109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3'C3'C2'O2'19.9°20.4°
O3'C3'C2'C4'116.7°118.7°
O3'C3'C2'H18124.8°122.7°
O3'C3'C4'H18122.0°122.7°
O3'C3'C2'C1'100.6°97.8°
O3'C3'C4'C5'99.5°119.9°
O3'C3'C4'O4'132.5°120.6°
O3'C3'C4'H1418.8°1.1°
O3'C3'C2'H16144.2°144.0°
O2'C2'C3'C1'120.4°118.2°
O2'C2'C3'H16124.3°123.6°
O2'C2'C3'C4'136.5°139.1°
O2'C2'C1'H16123.0°123.6°
O2'C2'C1'N976.1°86.3°
O2'C2'C1'O4'161.8°155.2°
O2'C2'C1'H1546.7°36.6°
O2'C2'C3'H18104.9°102.2°
C2'C3'C4'H18118.7°118.7°
C3'C2'C1'H16115.2°118.2°
C2'C3'C4'C5'141.1°121.5°
C2'C3'C4'O4'13.2°2.0°
C3'C2'C1'N9162.1°155.5°
C3'C2'C1'O4'40.1°37.0°
C2'C3'C4'H14100.5°117.5°
C3'C2'C1'H1575.0°81.6°
C3'C2'O2'H17180.0°67.4°
C2'C3'O3'H19180.0°61.5°
C4'C3'C2'C1'16.1°20.9°
C3'C4'C5'O4'121.9°117.9°
C3'C4'C5'H14118.3°121.1°
C3'C4'O4'H14112.8°119.5°
C3'C4'O4'C1'39.3°26.5°
C3'C4'C5'O5'56.1°175.7°
C3'C4'C5'H12176.6°64.3°
C3'C4'C5'H1364.3°55.7°
C4'C3'C2'H1699.2°97.3°
C4'C3'O3'H1965.0°176.2°
C2'C1'O4'C4'50.6°40.1°
C2'C1'N9O4'117.0°114.1°
C2'C1'N9H15122.6°123.0°
C2'C1'O4'H15114.3°118.6°
C2'C1'N9C4123.3°89.5°
C2'C1'N9C857.7°90.2°
C1'C2'O2'H1765.9°180.0°
C1'C2'C3'H18134.7°139.6°
C5'C4'O4'H14119.1°121.0°
C5'C4'O4'C1'167.4°145.9°
C4'C5'O5'H12120.5°119.9°
C4'C5'O5'H13120.5°120.0°
C4'C5'O5'PA155.3°180.0°
C4'C5'H12H13118.5°120.0°
C5'C4'C3'H1822.5°2.8°
C4'O4'C1'N9176.2°158.5°
O4'C4'C5'O5'65.8°66.4°
O4'C4'C5'H1254.6°53.5°
O4'C4'C5'H13173.7°173.5°
C4'O4'C1'H1563.7°78.6°
O4'C4'C3'H18105.5°116.7°
N9C1'O4'H15120.1°122.9°
C1'N9C4N31.2°0.1°
C1'N9C4C8179.2°179.8°
C1'N9C4C5179.3°179.9°
C1'N9C8N7179.6°180.0°
N9C1'C2'H1646.9°37.3°
C1'N9C8H200.4°0.0°
O4'C1'N9C4119.7°156.5°
O4'C1'N9C859.3°23.8°
C1'O4'C4'H1473.5°93.0°
O4'C1'C2'H1675.1°81.2°
O2APAO5'C5'37.8°55.0°
O2APAO5'O1A130.1°120.0°
O2APAO5'O3A120.4°120.0°
O2APAO1AO3A128.9°120.0°
O2APAO3APB29.5°45.0°
O2APAO1AH10.0°180.0°
O4DC4DC3DC5D121.6°120.0°
O4DC4DC3DH4117.9°120.0°
O4DC4DC5DH4119.3°120.0°
O4DC4DC3DO3D69.9°180.0°
O4DC4DC3DC2D165.4°60.0°
O4DC4DC5DO5D60.2°64.9°
O4DC4DC5DH2179.8°55.0°
O4DC4DC5DH359.9°175.0°
O4DC4DC3DH647.2°60.0°
N3C2N1H23180.0°179.3°
C2N3C4N9179.8°179.1°
C2N3C4C50.4°0.8°
N3C2N1C61.3°0.8°
C4N3C2N10.7°1.1°
N3C4N9C5179.5°179.9°
N3C4N9C8179.6°179.7°
N3C4C5C60.6°0.1°
N3C4C5N7179.4°179.7°
C4N3C2H23179.3°179.6°
C2N1C6C51.5°0.1°
C2N1C6N6179.1°180.0°
C5'O5'PAO1A167.9°65.1°
C5'O5'PAO3A82.5°175.0°
O5'C5'H12H13118.5°120.1°
O5'C5'C4'H14174.4°54.6°
C4N9C8N70.5°0.2°
N9C4C5C6179.8°179.8°
N9C4C5N70.2°0.4°
C4N9C1'H150.7°33.5°
C4N9C8H20179.6°179.8°
C8N9C4C50.1°0.4°
N9C8N7H20180.0°180.0°
N9C8N7C50.6°0.0°
C8N9C1'H15179.7°146.8°
C4C5C6N11.1°0.2°
C4C5N7C80.5°0.2°
C4C5C6N7179.9°179.8°
C4C5C6N6179.4°179.7°
O5'PAO1AO3A105.2°120.0°
O5'PAO3APB148.4°165.0°
O5'PAO1AH1125.9°60.0°
PAO5'C5'H1284.2°60.1°
PAO5'C5'H1334.8°60.0°
O1APAO3APB102.4°75.0°
PAO3APBO5D27.1°165.0°
PAO3APBO1B88.9°45.0°
PAO3APBO2B145.6°75.0°
O3APAO1AH1128.9°60.0°
N1C6C5N6179.5°179.9°
N1C6C5N7178.8°180.0°
N1C6N6H210.0°180.0°
N1C6N6H22120.0°0.1°
C6N1C2H23178.7°180.0°
C3DC4DC5DH4120.5°120.0°
C4DC3DO3DC2D125.7°120.0°
C4DC3DO3DH6116.3°120.0°
C4DC3DC2DH6118.1°120.0°
C3DC4DC5DO5D179.6°175.0°
C4DC3DC2DO2D53.3°100.0°
C4DC3DC2DC1D126.1°80.0°
C3DC4DC5DH259.5°65.1°
C3DC4DC5DH360.4°55.0°
C3DC4DO4DH5180.0°60.0°
C4DC3DO3DH10180.0°60.0°
C5DC4DC3DO3D51.8°60.0°
C5DC4DC3DC2D73.0°180.0°
C4DC5DO5DH2120.1°119.9°
C4DC5DO5DH3120.1°120.1°
C4DC5DO5DPB172.3°180.0°
C4DC5DH2H3119.8°120.0°
C5DC4DO4DH555.5°60.0°
C5DC4DC3DH6168.9°60.0°
C8N7C5C6179.6°180.0°
O3DC3DC2DH6118.6°120.0°
O3DC3DC2DO2D176.6°20.0°
O3DC3DC2DC1D2.8°160.0°
O3DC3DC4DH4172.2°60.0°
C3DC2DO2DC1D179.4°179.9°
C3DC2DC1DO1D101.2°180.0°
C2DC3DC4DH447.5°60.0°
C3DC2DC1DH719.7°60.1°
C3DC2DC1DH8138.0°60.0°
C2DC3DO3DH1054.3°60.0°
C5C6N6H21179.5°0.1°
C5C6N6H2260.5°180.0°
N7C5C6N60.6°0.1°
C5N7C8H20179.4°180.0°
C6N6H21H22120.0°180.0°
C5DO5DPBO3A73.1°175.0°
C5DO5DPBO1B170.3°54.9°
C5DO5DPBO2B39.7°65.0°
O5DC5DH2H3119.8°120.0°
O5DC5DC4DH459.1°55.1°
O5DPBO3AO1B115.9°120.0°
O5DPBO3AO2B118.5°120.0°
O5DPBO1BO2B128.0°120.0°
PBO5DC5DH267.6°60.1°
PBO5DC5DH352.2°59.9°
O5DPBO2BH11125.9°60.0°
O3APBO1BO2B117.8°120.0°
O3APBO2BH11120.4°59.9°
O2DC2DC1DO1D79.5°0.1°
O2DC2DC3DH664.8°140.0°
O2DC2DC1DH7159.7°120.0°
O2DC2DC1DH841.4°120.0°
C2DC1DO1DH7120.9°120.0°
C2DC1DO1DH8120.9°120.1°
C1DC2DC3DH6115.8°40.0°
C2DC1DH7H8117.2°120.1°
C2DC1DO1DH9180.0°180.0°
O1BPBO2BH110.0°180.0°
O1DC1DH7H8117.2°120.0°
H2C5DC4DH460.9°175.0°
H3C5DC4DH4179.2°65.0°
H4C4DO4DH562.9°180.0°
H4C4DC3DH670.7°180.0°
H6C3DO3DH1063.7°179.9°
H7C1DO1DH959.1°60.0°
H8C1DO1DH959.1°59.9°
H12C5'C4'H1465.1°174.6°
H13C5'C4'H1454.0°65.4°
H14C4'C3'H18140.8°123.8°
H15C1'C2'H16169.7°160.3°
H16C2'O2'H1756.4°56.3°
H16C2'C3'H1819.4°21.4°
H18C3'O3'H1956.1°61.1°

222415

PDB entries from 2024-07-10

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