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Summary Geometry Related PDB entries

47R

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C3	C2	sing	1.53Å	1.51Å
C1	N	sing	1.47Å	1.47Å
C1	C	sing	1.53Å	1.50Å
C2	N	sing	1.47Å	1.47Å
N	C4	sing	1.37Å	1.35Å
C4	C5	sing	1.51Å	1.49Å
C4	N1	doub	1.29Å	1.27Å
C5	H1	sing	1.09Å	1.10Å
C5	H2	sing	1.09Å	1.10Å
C5	H3	sing	1.09Å	1.10Å
N1	H4	sing	0.97Å	1.00Å
C2	H5	sing	1.09Å	1.10Å
C2	H6	sing	1.09Å	1.10Å
C3	H7	sing	1.09Å	1.10Å
C3	H8	sing	1.09Å	1.10Å
C3	H9	sing	1.09Å	1.10Å
C1	H10	sing	1.09Å	1.10Å
C1	H11	sing	1.09Å	1.10Å
C	H12	sing	1.09Å	1.10Å
C	H13	sing	1.09Å	1.10Å
C	H14	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C3	C2	N	112.4°	109.5°
C3	C2	H5	108.8°	109.5°
C3	C2	H6	108.7°	109.5°
C2	C3	H7	109.5°	109.5°
C2	C3	H8	109.5°	109.5°
C2	C3	H9	109.5°	109.5°
N	C1	C	112.4°	109.4°
C1	N	C2	116.2°	120.0°
C1	N	C4	122.2°	120.0°
N	C1	H10	108.8°	109.4°
N	C1	H11	108.7°	109.5°
C	C1	H10	108.7°	109.5°
C	C1	H11	108.7°	109.5°
C1	C	H12	109.5°	109.4°
C1	C	H13	109.4°	109.5°
C1	C	H14	109.5°	109.5°
C2	N	C4	121.6°	120.0°
N	C2	H5	108.7°	109.4°
N	C2	H6	108.7°	109.4°
N	C4	C5	118.3°	120.0°
N	C4	N1	128.1°	120.0°
C5	C4	N1	113.6°	120.0°
C4	C5	H1	109.5°	109.5°
C4	C5	H2	109.4°	109.4°
C4	C5	H3	109.5°	109.5°
C4	N1	H4	112.0°	120.0°
H1	C5	H2	109.5°	109.5°
H1	C5	H3	109.5°	109.5°
H2	C5	H3	109.5°	109.5°
H5	C2	H6	109.5°	109.5°
H7	C3	H8	109.4°	109.5°
H7	C3	H9	109.5°	109.5°
H8	C3	H9	109.5°	109.5°
H10	C1	H11	109.5°	109.5°
H12	C	H13	109.5°	109.5°
H12	C	H14	109.5°	109.5°
H13	C	H14	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C3	C2	N	C1	71.7°	89.9°
C3	C2	N	H5	120.5°	120.0°
C3	C2	N	H6	120.4°	120.0°
C3	C2	N	C4	107.7°	90.0°
C3	C2	H5	H6	118.7°	120.1°
C2	C3	H7	H8	120.0°	120.0°
C2	C3	H7	H9	120.0°	120.0°
C2	C3	H8	H9	120.0°	120.0°
N	C1	C	H10	120.5°	119.9°
N	C1	C	H11	120.4°	120.0°
C1	N	C2	C4	179.4°	179.9°
C1	N	C4	C5	178.1°	5.6°
C1	N	C4	N1	3.0°	174.7°
C1	N	C2	H5	167.8°	30.1°
C1	N	C2	H6	48.7°	150.0°
N	C1	H10	H11	118.7°	120.0°
N	C1	C	H12	180.0°	60.0°
N	C1	C	H13	60.0°	60.0°
N	C1	C	H14	60.0°	180.0°
C	C1	N	C2	104.4°	95.2°
C	C1	N	C4	76.2°	84.9°
C	C1	H10	H11	118.6°	120.0°
C1	C	H12	H13	120.0°	120.0°
C1	C	H12	H14	120.0°	120.0°
C1	C	H13	H14	120.0°	120.0°
C2	N	C4	C5	1.3°	174.3°
C2	N	C4	N1	177.6°	5.4°
N	C2	H5	H6	118.6°	119.9°
N	C2	C3	H7	180.0°	60.0°
N	C2	C3	H8	60.0°	60.0°
N	C2	C3	H9	60.0°	180.0°
C2	N	C1	H10	16.0°	24.7°
C2	N	C1	H11	135.1°	144.8°
N	C4	C5	N1	179.1°	179.7°
N	C4	C5	H1	180.0°	86.1°
N	C4	C5	H2	60.0°	33.9°
N	C4	C5	H3	60.0°	153.9°
N	C4	N1	H4	179.0°	179.8°
C4	N	C2	H5	12.8°	150.0°
C4	N	C2	H6	131.9°	30.0°
C4	N	C1	H10	163.4°	155.2°
C4	N	C1	H11	44.3°	35.2°
C4	C5	H1	H2	120.0°	119.9°
C4	C5	H1	H3	120.0°	120.0°
C4	C5	H2	H3	120.0°	120.0°
C5	C4	N1	H4	0.0°	0.1°
N1	C4	C5	H1	0.9°	94.2°
N1	C4	C5	H2	120.9°	145.8°
N1	C4	C5	H3	119.1°	25.8°
H1	C5	H2	H3	120.0°	120.1°
H5	C2	C3	H7	59.6°	180.0°
H5	C2	C3	H8	60.4°	60.0°
H5	C2	C3	H9	179.6°	60.1°
H6	C2	C3	H7	59.5°	60.0°
H6	C2	C3	H8	179.6°	179.9°
H6	C2	C3	H9	60.5°	60.0°
H7	C3	H8	H9	120.0°	120.0°
H10	C1	C	H12	59.5°	180.0°
H10	C1	C	H13	179.5°	59.9°
H10	C1	C	H14	60.5°	60.0°
H11	C1	C	H12	59.6°	60.0°
H11	C1	C	H13	60.4°	180.0°
H11	C1	C	H14	179.6°	60.0°
H12	C	H13	H14	120.0°	120.0°

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