Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

41Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C19C17sing1.53Å1.53Å
C18C17sing1.53Å1.53Å
C17C16sing1.51Å1.53Å
C15C16doub1.38Å1.40ÅAromatic
C15C14sing1.38Å1.39ÅAromatic
C16C20sing1.38Å1.39ÅAromatic
C14C13doub1.38Å1.39ÅAromatic
C20C21doub1.38Å1.39ÅAromatic
C13C21sing1.38Å1.39ÅAromatic
C13C11sing1.51Å1.58Å
C12C11sing1.53Å1.59Å
C11N10sing1.47Å1.34Å
C23C22sing1.53Å1.60Å
N10C22sing1.47Å1.39Å
N10C09sing1.47Å1.40Å
C22C06sing1.51Å1.52Å
C09C08sing1.53Å1.59Å
C06C05doub1.39Å1.44ÅAromatic
C06C07sing1.38Å1.31ÅAromatic
C05C04sing1.38Å1.38ÅAromatic
C08C07sing1.51Å1.56Å
C07C24doub1.40Å1.45ÅAromatic
C04C03doub1.39Å1.38ÅAromatic
C24C03sing1.40Å1.39ÅAromatic
C24C25sing1.48Å1.38Å
C03O02sing1.36Å1.40Å
C25C26doub1.39Å1.39ÅAromatic
C25C37sing1.39Å1.40ÅAromatic
O02C01sing1.43Å1.41Å
C26C27sing1.38Å1.38ÅAromatic
C37C31doub1.39Å1.40ÅAromatic
C27F28sing1.35Å1.36Å
C27C29doub1.39Å1.39ÅAromatic
C31C29sing1.39Å1.39ÅAromatic
C31N32sing1.40Å1.46Å
C29O30sing1.36Å1.40Å
N32C33sing1.46Å1.45Å
C35C34sing1.53Å1.53Å
C33C34sing1.53Å1.53Å
C34C36sing1.53Å1.53Å
C11H1sing1.09Å1.10Å
C12H2sing1.09Å1.10Å
C12H3sing1.09Å1.10Å
C12H4sing1.09Å1.10Å
C14H5sing1.08Å1.08Å
C15H6sing1.08Å1.08Å
C01H7sing1.09Å1.10Å
C01H8sing1.09Å1.10Å
C01H9sing1.09Å1.10Å
C04H10sing1.08Å1.08Å
C05H11sing1.08Å1.08Å
C08H12sing1.09Å1.10Å
C08H13sing1.09Å1.10Å
C09H14sing1.09Å1.10Å
C09H15sing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C18H18sing1.09Å1.10Å
C18H19sing1.09Å1.10Å
C18H20sing1.09Å1.10Å
C19H21sing1.09Å1.10Å
C19H22sing1.09Å1.10Å
C19H23sing1.09Å1.10Å
C20H24sing1.08Å1.08Å
C21H25sing1.08Å1.08Å
C22H26sing1.09Å1.10Å
C23H27sing1.09Å1.10Å
C23H28sing1.09Å1.10Å
C23H29sing1.09Å1.10Å
C26H30sing1.08Å1.08Å
O30H31sing0.97Å0.95Å
N32H32sing0.97Å1.00Å
C33H33sing1.09Å1.10Å
C33H34sing1.09Å1.10Å
C34H35sing1.09Å1.10Å
C35H36sing1.09Å1.10Å
C35H37sing1.09Å1.10Å
C35H38sing1.09Å1.10Å
C36H39sing1.09Å1.10Å
C36H40sing1.09Å1.10Å
C36H41sing1.09Å1.10Å
C37H42sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C19C17C18111.9°109.4°
C19C17C16110.4°109.5°
C19C17H17107.4°109.5°
C17C19H21109.5°109.4°
C17C19H22109.5°109.5°
C17C19H23109.5°109.5°
C18C17C16111.9°109.5°
C18C17H17107.5°109.4°
C17C18H18109.5°109.5°
C17C18H19109.4°109.5°
C17C18H20109.5°109.5°
C17C16C15120.9°120.0°
C17C16C20119.3°120.0°
C16C17H17107.5°109.5°
C16C15C14119.9°120.0°
C15C16C20119.8°120.0°
C16C15H6120.1°120.0°
C15C14C13119.7°120.0°
C15C14H5120.2°120.0°
C14C15H6120.1°120.0°
C16C20C21120.3°120.0°
C16C20H24119.9°120.0°
C14C13C21120.4°120.0°
C14C13C11120.8°120.0°
C13C14H5120.1°120.0°
C20C21C13119.9°120.0°
C21C20H24119.8°120.0°
C20C21H25120.0°120.1°
C21C13C11118.8°120.0°
C13C21H25120.1°119.9°
C13C11C12103.9°109.4°
C13C11N10108.7°109.5°
C13C11H1107.8°109.5°
C12C11N10117.1°109.4°
C12C11H1107.6°109.5°
C11C12H2109.5°109.4°
C11C12H3109.5°109.5°
C11C12H4109.5°109.4°
C11N10C22113.3°111.0°
C11N10C09116.5°111.0°
N10C11H1111.1°109.4°
C23C22N10110.2°109.2°
C23C22C06106.0°109.3°
C23C22H26107.2°109.2°
C22C23H27109.5°109.4°
C22C23H28109.5°109.4°
C22C23H29109.5°109.5°
C22N10C09116.1°110.3°
N10C22C06115.0°110.5°
N10C22H26109.9°109.3°
N10C09C08116.1°108.5°
N10C09H14107.8°109.6°
N10C09H15107.8°109.8°
C22C06C05119.4°118.3°
C22C06C07120.2°121.8°
C06C22H26108.2°109.3°
C09C08C07114.4°110.0°
C09C08H12108.2°109.4°
C09C08H13108.2°109.3°
C08C09H14107.8°109.7°
C08C09H15107.8°109.6°
C05C06C07120.3°119.9°
C06C05C04119.7°120.7°
C06C05H11120.2°119.7°
C06C07C08119.4°121.7°
C06C07C24120.2°119.8°
C05C04C03120.5°119.9°
C05C04H10119.7°120.0°
C04C05H11120.1°119.6°
C08C07C24120.3°118.5°
C07C08H12108.3°109.3°
C07C08H13108.2°109.4°
C07C24C03119.7°120.1°
C07C24C25119.9°120.0°
C04C03C24119.5°119.6°
C04C03O02120.0°120.2°
C03C04H10119.8°120.0°
C03C24C25120.3°119.9°
C24C03O02120.4°120.2°
C24C25C26115.4°120.0°
C24C25C37124.3°120.0°
C03O02C01115.0°117.0°
C26C25C37120.3°119.9°
C25C26C27120.4°120.0°
C25C26H30119.8°120.0°
C25C37C31119.2°119.9°
C25C37H42120.4°120.1°
O02C01H7109.5°109.5°
O02C01H8109.4°109.5°
O02C01H9109.4°109.5°
C26C27F28119.2°120.0°
C26C27C29119.9°120.1°
C27C26H30119.8°120.0°
C37C31C29120.0°119.9°
C37C31N32120.5°120.0°
C31C37H42120.4°120.0°
F28C27C29120.9°119.9°
C27C29C31120.2°120.1°
C27C29O30119.3°120.0°
C29C31N32119.4°120.0°
C31C29O30120.5°120.0°
C31N32C33121.6°120.0°
C31N32H32106.4°120.0°
C29O30H31109.5°114.0°
N32C33C34109.7°109.5°
C33N32H32106.4°120.0°
N32C33H33109.4°109.5°
N32C33H34109.4°109.5°
C35C34C33111.3°109.5°
C35C34C36110.5°109.5°
C35C34H35107.9°109.5°
C34C35H36109.5°109.5°
C34C35H37109.5°109.5°
C34C35H38109.5°109.5°
C33C34C36111.3°109.5°
C34C33H33109.4°109.5°
C34C33H34109.4°109.5°
C33C34H35107.8°109.5°
C36C34H35107.9°109.5°
C34C36H39109.5°109.4°
C34C36H40109.5°109.5°
C34C36H41109.5°109.5°
H2C12H3109.4°109.5°
H2C12H4109.4°109.5°
H3C12H4109.5°109.5°
H7C01H8109.5°109.5°
H7C01H9109.5°109.5°
H8C01H9109.5°109.5°
H12C08H13109.4°109.4°
H14C09H15109.5°109.7°
H18C18H19109.5°109.4°
H18C18H20109.5°109.5°
H19C18H20109.5°109.5°
H21C19H22109.5°109.5°
H21C19H23109.4°109.5°
H22C19H23109.5°109.5°
H27C23H28109.5°109.5°
H27C23H29109.4°109.5°
H28C23H29109.4°109.5°
H33C33H34109.5°109.4°
H36C35H37109.5°109.5°
H36C35H38109.4°109.5°
H37C35H38109.5°109.5°
H39C36H40109.5°109.5°
H39C36H41109.4°109.5°
H40C36H41109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C19C17C18C16124.5°120.0°
C19C17C18H17117.7°120.0°
C19C17C16H17116.9°120.0°
C19C17C16C1566.4°120.1°
C19C17C16C20113.2°60.0°
C19C17C18H18180.0°60.0°
C19C17C18H1960.0°180.0°
C19C17C18H2060.0°60.0°
C17C19H21H22120.0°120.0°
C17C19H21H23120.0°120.0°
C17C19H22H23120.0°120.0°
C18C17C16H17117.7°120.0°
C18C17C16C1558.9°120.0°
C18C17C16C20121.5°59.9°
C17C18H18H19120.0°120.0°
C17C18H18H20120.0°120.0°
C17C18H19H20120.0°120.0°
C18C17C19H21180.0°180.0°
C18C17C19H2260.0°60.0°
C18C17C19H2360.0°60.0°
C17C16C15C20179.6°179.9°
C17C16C15C14179.9°180.0°
C17C16C20C21179.9°180.0°
C17C16C15H60.1°0.1°
C16C17C18H1855.5°180.0°
C16C17C18H1964.5°60.1°
C16C17C18H20175.5°60.0°
C16C17C19H2154.7°60.0°
C16C17C19H22174.7°180.0°
C16C17C19H2365.3°60.0°
C17C16C20H240.1°0.0°
C16C15C14H6180.0°180.0°
C16C15C14C130.2°0.0°
C15C16C20C210.3°0.1°
C16C15C14H5179.8°179.9°
C15C16C17H17176.7°0.0°
C15C16C20H24179.7°180.0°
C14C15C16C200.3°0.1°
C15C14C13H5180.0°179.9°
C15C14C13C210.7°0.1°
C15C14C13C11179.2°179.8°
C16C20C21H24180.0°179.9°
C16C20C21C130.2°0.1°
C20C16C15H6179.7°180.0°
C20C16C17H173.7°179.9°
C16C20C21H25179.8°179.8°
C14C13C21C200.7°0.0°
C14C13C21C11178.5°179.7°
C14C13C11C12110.3°73.6°
C14C13C11N10124.3°46.3°
C14C13C11H13.8°166.3°
C13C14C15H6179.8°179.9°
C14C13C21H25179.3°179.7°
C20C21C13H25180.0°179.8°
C20C21C13C11179.2°179.7°
C21C13C11C1268.2°106.7°
C21C13C11N1057.2°133.3°
C21C13C11H1177.7°13.3°
C21C13C14H5179.3°180.0°
C13C21C20H24179.8°180.0°
C13C11C12N10119.9°120.0°
C13C11C12H1114.2°120.1°
C13C11N10H1118.5°120.0°
C13C11N10C2284.6°55.4°
C13C11N10C09136.9°178.4°
C13C11C12H2180.0°172.9°
C13C11C12H360.0°67.1°
C13C11C12H460.0°52.9°
C11C13C14H50.8°0.4°
C11C13C21H250.8°0.1°
C12C11N10H1124.2°120.0°
C12C11N10C22158.1°175.3°
C12C11N10C0919.6°61.6°
C11C12H2H3120.0°120.0°
C11C12H2H4120.0°119.9°
C11C12H3H4120.0°120.0°
C11N10C22C2371.5°55.8°
C11N10C22C09138.7°123.4°
C11N10C22C06168.8°176.0°
C11N10C09C08174.3°165.4°
N10C11C12H260.1°67.1°
N10C11C12H359.9°52.9°
N10C11C12H4179.9°172.9°
C11N10C09H1464.8°74.9°
C11N10C09H1553.3°45.7°
C11N10C22H2646.5°63.7°
C23C22N10C06119.7°120.2°
C23C22N10H26117.9°119.5°
C23C22N10C0967.3°67.7°
C23C22C06H26114.7°119.5°
C23C22C06C0590.4°77.2°
C23C22C06C0787.8°102.5°
C22C23H27H28120.0°119.9°
C22C23H27H29120.0°120.0°
C22C23H28H29120.0°120.0°
N10C22C06H26123.3°120.3°
C22N10C09C0836.8°71.2°
N10C22C06C05147.5°162.6°
N10C22C06C0734.2°17.8°
C22N10C11H133.9°64.7°
C22N10C09H14157.8°48.5°
C22N10C09H1584.1°169.1°
N10C22C23H27180.0°59.4°
N10C22C23H2860.0°179.3°
N10C22C23H2960.0°60.6°
C09N10C22C0652.4°52.6°
N10C09C08H14120.9°119.7°
N10C09C08H15120.9°119.9°
N10C09C08C074.4°50.4°
C09N10C11H1104.6°58.4°
N10C09C08H12116.4°170.5°
N10C09C08H13125.1°69.7°
N10C09H14H15117.0°120.6°
C09N10C22H26174.8°172.8°
C22C06C05C07178.2°179.7°
C22C06C05C04179.1°179.5°
C22C06C07C081.2°0.8°
C22C06C07C24178.3°179.1°
C22C06C05H110.9°0.5°
C06C22C23H2755.0°179.6°
C06C22C23H2865.1°59.7°
C06C22C23H29175.0°60.4°
C09C08C07C0612.9°17.2°
C09C08C07H12120.7°120.1°
C09C08C07H13120.7°120.1°
C09C08C07C24167.5°162.8°
C09C08H12H13117.7°119.7°
C08C09H14H15117.0°120.4°
C06C05C04H11180.0°179.9°
C05C06C07C08179.5°179.5°
C05C06C07C240.1°0.5°
C06C05C04C030.2°0.0°
C06C05C04H10179.8°179.9°
C05C06C22H2624.3°42.2°
C07C06C05C040.9°0.2°
C06C07C08C24179.6°180.0°
C06C07C24C031.3°0.7°
C06C07C24C25177.8°179.8°
C07C06C05H11179.1°179.8°
C06C07C08H12133.6°137.3°
C06C07C08H13107.8°102.9°
C07C06C22H26157.5°138.1°
C05C04C03H10180.0°179.9°
C05C04C03C241.2°0.2°
C05C04C03O02179.5°179.9°
C08C07C24C03179.1°179.3°
C08C07C24C252.6°0.2°
C07C08H12H13117.7°119.8°
C07C08C09H14125.3°69.2°
C07C08C09H15116.5°170.3°
C07C24C03C042.0°0.5°
C07C24C03C25176.5°179.4°
C07C24C03O02179.7°179.8°
C07C24C25C2682.7°65.0°
C07C24C25C3796.9°115.2°
C24C07C08H1246.8°42.7°
C24C07C08H1371.8°77.1°
C04C03C24O02178.3°179.7°
C04C03C24C25178.4°180.0°
C04C03O02C0154.0°0.0°
C03C04C05H11179.8°180.0°
C03C24C25C2693.7°115.6°
C03C24C25C3786.6°64.2°
C24C03O02C01124.4°179.7°
C24C03C04H10178.8°179.9°
C25C24C03O023.2°0.3°
C24C25C26C37179.6°179.8°
C24C25C26C27180.0°180.0°
C24C25C37C31179.8°179.7°
C24C25C26H300.1°0.0°
C24C25C37H420.2°0.1°
C03O02C01H7180.0°60.0°
C03O02C01H860.0°60.0°
C03O02C01H960.0°180.0°
O02C03C04H100.5°0.2°
C25C26C27H30180.0°180.0°
C26C25C37C310.6°0.5°
C25C26C27F28179.8°180.0°
C25C26C27C290.2°0.0°
C26C25C37H42179.4°179.7°
C37C25C26C270.4°0.2°
C25C37C31H42180.0°179.8°
C25C37C31C290.5°0.5°
C25C37C31N32179.6°179.7°
C37C25C26H30179.6°179.8°
O02C01H7H8120.0°120.0°
O02C01H7H9120.0°120.0°
O02C01H8H9120.0°120.0°
C26C27F28C29180.0°179.9°
C26C27C29C310.2°0.0°
C26C27C29O30180.0°180.0°
C37C31C29C270.4°0.2°
C37C31C29N32179.0°179.8°
C37C31C29O30179.8°179.7°
C37C31N32C3394.9°0.2°
C37C31N32H32143.4°179.7°
F28C27C29C31179.8°180.0°
F28C27C29O300.1°0.1°
F28C27C26H300.3°0.0°
C27C29C31O30179.8°179.9°
C27C29C31N32179.4°180.0°
C29C27C26H30179.8°179.9°
C27C29O30H31180.0°90.0°
C29C31N32C3386.1°180.0°
C31C29O30H310.2°90.0°
C29C31N32H3235.6°0.0°
C29C31C37H42179.5°179.7°
N32C31C29O300.8°0.1°
C31N32C33H32121.7°180.0°
C31N32C33C34145.3°180.0°
C31N32C33H3325.3°60.0°
C31N32C33H3494.6°60.0°
N32C31C37H420.5°0.1°
N32C33C34C3553.6°175.0°
N32C33C34H33120.0°120.0°
N32C33C34H34120.0°120.0°
N32C33C34C36177.3°65.0°
N32C33H33H34119.9°120.0°
N32C33C34H3564.6°55.0°
C35C34C33C36123.7°120.0°
C35C34C33H35118.1°120.0°
C35C34C36H35117.7°120.0°
C35C34C33H3366.4°55.0°
C35C34C33H34173.6°65.0°
C34C35H36H37120.0°120.0°
C34C35H36H38120.0°120.0°
C34C35H37H38120.0°120.0°
C35C34C36H39180.0°180.0°
C35C34C36H4060.0°60.0°
C35C34C36H4160.0°60.0°
C33C34C36H35118.1°120.0°
C34C33N32H3293.0°0.0°
C34C33H33H34119.9°120.0°
C33C34C35H36180.0°60.0°
C33C34C35H3760.0°180.0°
C33C34C35H3860.0°60.0°
C33C34C36H3955.8°60.0°
C33C34C36H40175.8°180.0°
C33C34C36H4164.2°60.0°
C36C34C33H3357.3°175.0°
C36C34C33H3462.7°55.0°
C36C34C35H3655.8°60.0°
C36C34C35H37175.8°60.0°
C36C34C35H3864.2°180.0°
C34C36H39H40120.0°120.0°
C34C36H39H41120.0°120.0°
C34C36H40H41120.0°120.0°
H1C11C12H265.8°52.8°
H1C11C12H3174.2°172.8°
H1C11C12H454.2°67.1°
H2C12H3H4120.0°120.1°
H5C14C15H60.2°0.0°
H7C01H8H9120.0°120.0°
H10C04C05H110.2°0.0°
H12C08C09H144.6°50.8°
H12C08C09H15122.7°69.6°
H13C08C09H14114.0°170.6°
H13C08C09H154.2°50.2°
H17C17C18H1862.3°59.9°
H17C17C18H19177.7°60.0°
H17C17C18H2057.7°179.9°
H17C17C19H2162.3°60.1°
H17C17C19H2257.7°59.9°
H17C17C19H23177.7°179.9°
H18C18H19H20120.0°120.0°
H21C19H22H23119.9°120.0°
H24C20C21H250.2°0.2°
H26C22C23H2760.4°60.2°
H26C22C23H28179.6°59.8°
H26C22C23H2959.6°179.8°
H27C23H28H29119.9°120.1°
H32N32C33H33147.0°120.0°
H32N32C33H3427.0°120.0°
H33C33C34H35175.4°65.0°
H34C33C34H3555.5°175.0°
H35C34C35H3661.9°180.0°
H35C34C35H3758.1°60.0°
H35C34C35H38178.1°60.0°
H35C34C36H3962.3°60.0°
H35C34C36H4057.7°60.0°
H35C34C36H41177.7°180.0°
H36C35H37H38120.0°120.0°
H39C36H40H41119.9°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon