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SummaryGeometryRelated PDB entries

404

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C2C1doub1.40Å1.48ÅAromatic
C1N13sing1.38Å1.35Å
C1N6sing1.33Å1.35ÅAromatic
N7C2sing1.37Å1.35ÅAromatic
C2C3sing1.41Å1.47ÅAromatic
C9C3sing1.41Å1.49ÅAromatic
C3N4doub1.34Å1.37ÅAromatic
N4C5sing1.32Å1.38ÅAromatic
C5N6doub1.33Å1.37ÅAromatic
C5N21sing1.39Å1.36Å
N8N7sing1.40Å1.41ÅAromatic
N8C9doub1.30Å1.34ÅAromatic
C10C9sing1.51Å1.49Å
C11C10sing1.53Å1.53Å
C10C12sing1.53Å1.53Å
C10H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C11H11Bsing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C12H12Bsing1.09Å1.10Å
N13C14sing1.47Å1.46Å
N13HN13sing0.97Å1.00Å
C14C15sing1.51Å1.51Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C20C15doub1.38Å1.39ÅAromatic
C15C16sing1.38Å1.39ÅAromatic
C16C17doub1.38Å1.39ÅAromatic
C16H16sing1.08Å1.08Å
C18C17sing1.38Å1.39ÅAromatic
C17H17sing1.08Å1.08Å
C19C18doub1.38Å1.39ÅAromatic
C18H18sing1.08Å1.08Å
C20C19sing1.38Å1.39ÅAromatic
C19H19sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
N21C22sing1.46Å1.45Å
N21HN21sing0.97Å1.00Å
C25C22sing1.53Å1.52Å
C22C23sing1.53Å1.52Å
C22H22sing1.09Å1.10Å
C23C24sing1.53Å1.51Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C24H24Bsing1.09Å1.10Å
O26C25sing1.43Å1.43Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
O26HO26sing0.97Å0.95Å
N7HN7sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C2C1N13121.4°120.7°
C2C1N6116.9°118.7°
C1C2N7135.1°134.7°
C1C2C3117.0°118.5°
N13C1N6121.7°120.7°
C1N13C14120.8°120.0°
C1N13HN13105.9°120.0°
C1N6C5123.8°121.2°
N7C2C3107.8°106.7°
C2N7N8110.3°107.9°
C2N7HN7124.8°126.0°
C2C3C9104.3°106.9°
C2C3N4121.5°118.8°
C9C3N4134.3°134.3°
C3C9N8107.7°108.7°
C3C9C10121.4°125.6°
C3N4C5118.0°120.5°
N4C5N6122.7°122.4°
N4C5N21122.4°118.8°
N6C5N21114.9°118.8°
C5N21C22125.4°120.0°
C5N21HN21104.5°120.0°
N7N8C9109.9°109.6°
N8N7HN7124.9°126.0°
N8C9C10130.9°125.6°
C9C10C11110.8°109.5°
C9C10C12111.7°109.5°
C9C10H10107.6°109.4°
C11C10C12111.4°109.5°
C11C10H10108.0°109.5°
C10C11H11109.5°109.5°
C10C11H11A109.5°109.5°
C10C11H11B109.5°109.5°
C12C10H10107.0°109.5°
C10C12H12109.5°109.5°
C10C12H12A109.5°109.5°
C10C12H12B109.4°109.5°
H11C11H11A109.5°109.5°
H11C11H11B109.5°109.4°
H11AC11H11B109.5°109.5°
H12C12H12A109.5°109.5°
H12C12H12B109.5°109.5°
H12AC12H12B109.5°109.4°
C14N13HN13105.9°120.0°
N13C14C15110.4°109.5°
N13C14H14109.1°109.4°
N13C14H14A109.2°109.5°
C15C14H14109.2°109.5°
C15C14H14A109.1°109.5°
C14C15C20120.4°120.0°
C14C15C16119.7°120.0°
H14C14H14A109.8°109.5°
C20C15C16119.8°120.0°
C15C20C19120.2°120.0°
C15C20H20119.9°120.0°
C15C16C17120.1°120.0°
C15C16H16120.0°120.0°
C17C16H16119.9°120.0°
C16C17C18119.8°120.0°
C16C17H17120.1°120.0°
C18C17H17120.1°120.0°
C17C18C19120.3°120.0°
C17C18H18119.8°120.0°
C19C18H18119.8°120.0°
C18C19C20119.7°120.0°
C18C19H19120.1°120.0°
C20C19H19120.2°120.0°
C19C20H20119.9°120.1°
C22N21HN21104.5°120.1°
N21C22C25112.2°109.4°
N21C22C23109.7°109.5°
N21C22H22107.5°109.5°
C25C22C23109.6°109.5°
C25C22H22107.6°109.4°
C22C25O26108.0°109.5°
C22C25H25110.0°109.5°
C22C25H25A110.0°109.5°
C23C22H22110.2°109.5°
C22C23C24110.4°109.5°
C22C23H23109.2°109.5°
C22C23H23A109.2°109.4°
C24C23H23109.1°109.5°
C24C23H23A109.2°109.5°
C23C24H24109.5°109.4°
C23C24H24A109.5°109.5°
C23C24H24B109.5°109.4°
H23C23H23A109.8°109.4°
H24C24H24A109.4°109.5°
H24C24H24B109.5°109.5°
H24AC24H24B109.5°109.5°
O26C25H25110.0°109.5°
O26C25H25A110.0°109.5°
C25O26HO26109.5°114.0°
H25C25H25A108.9°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C2C1N13N6179.4°179.7°
C1C2N7C3179.4°180.0°
C1C2C3C9179.7°180.0°
C1C2C3N40.5°0.1°
C2C1N6C50.9°0.6°
C1C2N7N8179.7°180.0°
C2C1N13C14170.6°179.7°
C2C1N13HN1369.4°0.2°
C1C2N7HN70.3°0.0°
N13C1C2N70.1°0.0°
N13C1C2C3179.4°180.0°
N13C1N6C5179.7°179.7°
C1N13C14HN13120.0°179.9°
C1N13C14C15106.6°180.0°
C1N13C14H14133.4°60.0°
C1N13C14H14A13.4°59.9°
N6C1C2N7179.3°179.7°
N6C1C2C30.0°0.2°
C1N6C5N41.4°0.6°
C1N6C5N21179.8°179.7°
N6C1N13C1410.0°0.0°
N6C1N13HN13110.0°180.0°
N7C2C3C90.8°0.0°
N7C2C3N4180.0°180.0°
C2N7N8HN7180.0°180.0°
C2N7N8C90.7°0.0°
C2C3C9N4179.1°179.9°
C2C3N4C50.1°0.1°
C3C2N7N80.9°0.0°
C2C3C9N80.3°0.0°
C2C3C9C10179.9°180.0°
C3C2N7HN7179.1°180.0°
C9C3N4C5179.1°180.0°
C3C9N8N70.2°0.0°
C3C9N8C10179.8°180.0°
C3C9C10C1165.1°120.0°
C3C9C10C1259.7°119.9°
C3C9C10H10177.0°0.0°
C3N4C5N60.8°0.2°
C3N4C5N21179.5°180.0°
N4C3C9N8179.4°180.0°
N4C3C9C100.8°0.1°
N4C5N6N21178.8°179.8°
N4C5N21C2224.9°180.0°
N4C5N21HN2195.1°0.1°
N6C5N21C22156.2°0.2°
N6C5N21HN2183.8°179.7°
C5N21C22HN21120.0°180.0°
C5N21C22C2526.3°155.0°
C5N21C22C2395.8°85.0°
C5N21C22H22144.4°35.1°
N7N8C9C10179.6°180.0°
N8C9C10C11115.2°60.0°
N8C9C10C12120.0°60.0°
N8C9C10H102.8°180.0°
C9N8N7HN7179.3°180.0°
C9C10C11C12125.0°120.0°
C9C10C11H10117.7°120.0°
C9C10C12H10117.6°119.9°
C9C10C11H11180.0°60.0°
C9C10C11H11A60.0°180.0°
C9C10C11H11B60.0°60.0°
C9C10C12H12180.0°180.0°
C9C10C12H12A60.0°60.0°
C9C10C12H12B60.0°60.0°
C11C10C12H10117.9°120.0°
C10C11H11H11A120.0°120.0°
C10C11H11H11B120.0°120.0°
C10C11H11AH11B120.0°120.0°
C11C10C12H1255.5°60.0°
C11C10C12H12A175.5°60.0°
C11C10C12H12B64.5°180.0°
C12C10C11H1155.0°60.0°
C12C10C11H11A65.0°60.0°
C12C10C11H11B175.0°180.0°
C10C12H12H12A120.0°120.0°
C10C12H12H12B120.0°120.0°
C10C12H12AH12B120.0°120.0°
H10C10C11H1162.3°180.0°
H10C10C11H11A177.7°60.0°
H10C10C11H11B57.7°60.0°
H10C10C12H1262.4°60.1°
H10C10C12H12A57.6°179.9°
H10C10C12H12B177.6°60.0°
H11C11H11AH11B120.0°119.9°
H12C12H12AH12B120.0°120.0°
N13C14C15H14120.0°120.0°
N13C14C15H14A120.0°120.0°
N13C14H14H14A119.6°120.0°
N13C14C15C2061.0°90.3°
N13C14C15C16118.6°90.0°
HN13N13C14C1513.4°0.0°
HN13N13C14H14106.6°120.0°
HN13N13C14H14A133.4°120.0°
C15C14H14H14A119.6°120.0°
C14C15C20C16179.5°179.7°
C14C15C16C17179.8°180.0°
C14C15C16H160.2°0.0°
C14C15C20C19180.0°179.7°
C14C15C20H200.0°0.0°
H14C14C15C2059.0°149.7°
H14C14C15C16121.4°30.0°
H14AC14C15C20179.0°29.7°
H14AC14C15C161.4°150.0°
C20C15C16C170.3°0.3°
C20C15C16H16179.7°179.7°
C15C20C19C180.5°0.6°
C15C20C19H20180.0°179.7°
C15C20C19H19179.5°179.7°
C15C16C17H16180.0°180.0°
C15C16C17C180.0°0.0°
C15C16C17H17180.0°180.0°
C16C15C20C190.5°0.6°
C16C15C20H20179.5°179.8°
C16C17C18H17180.0°180.0°
C16C17C18C190.0°0.0°
C16C17C18H18180.0°180.0°
H16C16C17C18180.0°180.0°
H16C16C17H170.0°0.0°
C17C18C19H18180.0°180.0°
C17C18C19C200.2°0.3°
C17C18C19H19179.8°180.0°
H17C17C18C19180.0°180.0°
H17C17C18H180.0°0.0°
C18C19C20H19180.0°179.7°
C18C19C20H20179.5°179.8°
H18C18C19C20179.8°179.7°
H18C18C19H190.2°0.1°
H19C19C20H200.5°0.0°
N21C22C25C23122.2°120.0°
N21C22C25H22118.0°120.0°
N21C22C23H22118.2°120.1°
N21C22C23C2441.2°65.0°
N21C22C23H23161.2°174.9°
N21C22C23H23A78.8°55.0°
N21C22C25O2697.7°65.0°
N21C22C25H25142.3°175.0°
N21C22C25H25A22.3°55.0°
HN21N21C22C25146.3°25.0°
HN21N21C22C2324.2°95.0°
HN21N21C22H2295.6°145.0°
C25C22C23H22118.2°119.9°
C25C22C23C24164.8°175.0°
C25C22C23H2375.2°55.0°
C25C22C23H23A44.8°65.0°
C22C25O26H25120.0°120.0°
C22C25O26H25A120.0°120.0°
C22C25H25H25A120.6°120.0°
C22C25O26HO26180.0°180.0°
C22C23C24H23120.0°120.0°
C22C23C24H23A120.0°120.0°
C22C23H23H23A119.6°119.9°
C22C23C24H24180.0°180.0°
C22C23C24H24A60.0°59.9°
C22C23C24H24B60.0°60.0°
C23C22C25O2624.5°55.0°
C23C22C25H2595.5°65.0°
C23C22C25H25A144.5°175.0°
H22C22C23C2477.0°55.1°
H22C22C23H2343.0°65.0°
H22C22C23H23A163.0°175.1°
H22C22C25O26144.3°175.0°
H22C22C25H2524.3°55.0°
H22C22C25H25A95.7°65.0°
C24C23H23H23A119.6°120.1°
C23C24H24H24A120.0°120.0°
C23C24H24H24B120.0°119.9°
C23C24H24AH24B120.0°120.0°
H23C23C24H2460.0°60.0°
H23C23C24H24A180.0°180.0°
H23C23C24H24B60.0°60.0°
H23AC23C24H2460.0°60.0°
H23AC23C24H24A60.0°60.0°
H23AC23C24H24B180.0°180.0°
H24C24H24AH24B120.0°120.0°
O26C25H25H25A120.6°120.0°
H25C25O26HO2660.0°60.0°
H25AC25O26HO2660.0°60.0°

248636

PDB entries from 2026-02-04

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