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3XZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2N1doub1.32Å1.35ÅAromatic
C2N3sing1.32Å1.35ÅAromatic
N1C6sing1.33Å1.36ÅAromatic
N3C4doub1.33Å1.36ÅAromatic
C6N6sing1.38Å1.35Å
C6C5doub1.41Å1.48ÅAromatic
C4C5sing1.40Å1.47ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C2'C3'sing1.55Å1.52Å
C2'C1'sing1.54Å1.52Å
C5N7sing1.36Å1.34ÅAromatic
C3'O3'sing1.43Å1.43Å
C3'C4'sing1.55Å1.53Å
N9C1'sing1.47Å1.41Å
N9C8sing1.36Å1.34ÅAromatic
C5'C4'sing1.53Å1.52Å
C5'O5'sing1.43Å1.42Å
C1'O4'sing1.44Å1.43Å
N7C8doub1.30Å1.35ÅAromatic
C4'O4'sing1.44Å1.42Å
O5'Psing1.61Å1.43Å
O3PPdoub1.48Å1.52Å
PO2Psing1.61Å1.51Å
PO1Psing1.61Å1.53Å
O1PC5Asing1.43Å1.55Å
C5AC4Asing1.53Å1.52Å
C4AO4Asing1.44Å1.43Å
C4AC3Asing1.55Å1.52Å
O4AC1Asing1.44Å1.43Å
N13C12doub1.32Å1.35ÅAromatic
N13C14sing1.33Å1.35ÅAromatic
O3AC3Asing1.43Å1.43Å
C12N11sing1.32Å1.35ÅAromatic
C3AC2Asing1.55Å1.52Å
C1AN19sing1.47Å1.14Å
C1AC2Asing1.54Å1.52Å
C14N19sing1.37Å1.34ÅAromatic
C14C15doub1.40Å1.47ÅAromatic
N19C18sing1.36Å1.35ÅAromatic
N11C16doub1.33Å1.35ÅAromatic
C18N17doub1.30Å1.36ÅAromatic
C15C16sing1.41Å1.48ÅAromatic
C15N17sing1.35Å1.35ÅAromatic
C16N16sing1.38Å1.35Å
C8H1sing1.08Å1.08Å
O2PH2sing0.97Å0.95Å
C5'H3sing1.09Å1.10Å
C5'H4sing1.09Å1.10Å
C4'H5sing1.09Å1.10Å
C3'H6sing1.09Å1.10Å
O3'H7sing0.97Å0.95Å
C2'H8sing1.09Å1.10Å
C2'H9sing1.09Å1.10Å
C1'H10sing1.09Å1.10Å
C2H11sing1.08Å1.08Å
N6H12sing0.97Å1.00Å
N6H13sing0.97Å1.00Å
C5AH14sing1.09Å1.10Å
C5AH15sing1.09Å1.10Å
C4AH16sing1.09Å1.10Å
C3AH17sing1.09Å1.10Å
O3AH18sing0.97Å0.95Å
C2AH19sing1.09Å1.10Å
C2AH20sing1.09Å1.10Å
C1AH21sing1.09Å1.10Å
C18H22sing1.08Å1.08Å
C12H23sing1.08Å1.08Å
N16H24sing0.97Å1.00Å
N16H25sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C2N3123.3°122.5°
C2N1C6121.4°121.2°
N1C2H11118.3°118.8°
C2N3C4120.6°120.6°
N3C2H11118.4°118.8°
N1C6N6122.5°120.8°
N1C6C5118.5°118.4°
N3C4C5119.3°119.1°
N3C4N9135.3°134.9°
N6C6C5119.1°120.8°
C6N6H12109.5°120.0°
C6N6H13109.5°120.0°
C6C5C4116.9°118.2°
C6C5N7135.7°134.6°
C5C4N9105.4°106.0°
C4C5N7107.4°107.2°
C4N9C1'129.2°126.3°
C4N9C8109.2°107.4°
C3'C2'C1'101.6°104.2°
C2'C3'O3'106.3°110.9°
C2'C3'C4'106.9°102.1°
C2'C3'H6111.2°110.9°
C3'C2'H8111.4°110.5°
C3'C2'H9111.4°110.4°
C2'C1'N9121.0°109.9°
C2'C1'O4'108.1°107.3°
C1'C2'H8111.4°110.5°
C1'C2'H9111.4°110.5°
C2'C1'H10101.4°109.9°
C5N7C8107.1°109.4°
O3'C3'C4'108.7°110.9°
O3'C3'H6112.5°110.8°
C3'O3'H7109.5°114.0°
C3'C4'C5'112.7°110.6°
C3'C4'O4'106.9°103.5°
C3'C4'H5108.7°110.8°
C4'C3'H6111.0°111.0°
C1'N9C8118.3°126.3°
N9C1'O4'118.3°109.9°
N9C1'H10102.3°110.0°
N9C8N7110.8°110.0°
N9C8H1124.6°125.0°
C4'C5'O5'105.7°109.5°
C5'C4'O4'109.5°110.6°
C4'C5'H3110.4°109.5°
C4'C5'H4110.4°109.4°
C5'C4'H5108.9°110.6°
C5'O5'P146.4°123.0°
O5'C5'H3110.4°109.5°
O5'C5'H4110.4°109.5°
C1'O4'C4'109.2°106.9°
O4'C1'H10102.1°109.9°
N7C8H1124.6°125.0°
O4'C4'H5110.2°110.6°
O5'PO3P89.4°109.4°
O5'PO2P118.6°109.5°
O5'PO1P81.9°109.5°
O3PPO2P117.2°109.5°
O3PPO1P119.4°109.5°
O2PPO1P119.4°109.5°
PO2PH2109.5°114.0°
PO1PC5A127.8°123.0°
O1PC5AC4A119.8°109.5°
O1PC5AH14106.8°109.4°
O1PC5AH15106.8°109.5°
C5AC4AO4A109.8°110.6°
C5AC4AC3A111.2°110.6°
C4AC5AH14106.8°109.5°
C4AC5AH15106.8°109.5°
C5AC4AH16109.0°110.6°
O4AC4AC3A107.7°103.5°
C4AO4AC1A111.9°107.0°
O4AC4AH16110.2°110.6°
C4AC3AO3A110.0°110.9°
C4AC3AC2A106.4°102.1°
C3AC4AH16109.0°110.8°
C4AC3AH17109.6°110.9°
O4AC1AN19116.6°109.9°
O4AC1AC2A107.8°107.3°
O4AC1AH2199.9°110.0°
C12N13C14120.9°120.7°
N13C12N11123.7°122.4°
N13C12H23118.1°118.8°
N13C14N19135.0°134.9°
N13C14C15118.7°119.1°
O3AC3AC2A110.0°110.9°
O3AC3AH17110.9°110.8°
C3AO3AH18109.5°114.0°
C12N11C16121.7°121.2°
N11C12H23118.1°118.8°
C3AC2AC1A106.1°104.2°
C2AC3AH17109.7°110.9°
C3AC2AH19110.3°110.5°
C3AC2AH20110.3°110.5°
N19C1AC2A125.5°109.9°
C1AN19C14113.6°126.3°
C1AN19C18117.8°126.2°
N19C1AH21102.5°109.8°
C1AC2AH19110.3°110.5°
C1AC2AH20110.3°110.6°
C2AC1AH2199.3°109.9°
N19C14C15106.3°106.0°
C14N19C18108.5°107.5°
C14C15C16117.3°118.2°
C14C15N17106.7°107.1°
N19C18N17111.1°109.9°
N19C18H22124.5°125.1°
N11C16C15117.7°118.4°
N11C16N16121.1°120.7°
C18N17C15107.4°109.5°
N17C18H22124.5°125.0°
C16C15N17136.0°134.7°
C15C16N16121.2°120.8°
C16N16H24109.5°120.0°
C16N16H25109.5°120.1°
H3C5'H4109.5°109.5°
H8C2'H9109.5°110.6°
H12N6H13109.4°120.0°
H14C5AH15109.5°109.5°
H19C2AH20109.5°110.4°
H24N16H25109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3H11180.0°180.0°
N1C2N3C40.0°0.0°
C2N1C6N6179.3°180.0°
C2N1C6C50.0°0.0°
N3C2N1C60.0°0.0°
C2N3C4C50.2°0.0°
C2N3C4N9179.9°180.0°
N1C6N6C5179.3°180.0°
N1C6C5C40.1°0.0°
N1C6C5N7179.4°179.9°
C6N1C2H11179.9°180.0°
N1C6N6H120.0°0.0°
N1C6N6H13120.0°180.0°
N3C4C5C60.2°0.0°
N3C4C5N9179.8°180.0°
N3C4C5N7179.7°180.0°
N3C4N9C1'21.5°0.0°
N3C4N9C8179.8°180.0°
C4N3C2H11180.0°180.0°
N6C6C5C4179.2°180.0°
N6C6C5N70.1°0.1°
C6N6H12H13120.0°180.0°
C6C5C4N7179.5°179.9°
C6C5C4N9180.0°180.0°
C6C5N7C8179.9°180.0°
C5C6N6H12179.3°180.0°
C5C6N6H1360.7°0.0°
C5C4N9C1'158.7°180.0°
C5C4N9C80.0°0.0°
C4C5N7C80.8°0.0°
C4N9C1'C2'37.0°85.0°
N9C4C5N70.5°0.0°
C4N9C1'C8157.1°180.0°
C4N9C1'O4'100.3°157.2°
C4N9C8N70.5°0.0°
C4N9C8H1179.5°179.9°
C4N9C1'H10148.6°36.1°
C3'C2'C1'H8118.7°118.7°
C3'C2'C1'H9118.7°118.6°
C2'C3'O3'C4'114.7°112.7°
C2'C3'O3'H6121.9°123.7°
C2'C3'C4'H6121.4°118.2°
C3'C2'C1'N9168.3°121.5°
C2'C3'C4'C5'113.5°155.5°
C3'C2'C1'O4'27.2°2.0°
C2'C3'C4'O4'6.8°37.0°
C2'C3'C4'H5125.8°81.5°
C2'C3'O3'H7180.0°67.3°
C3'C2'H8H9123.7°122.6°
C3'C2'C1'H1079.7°117.4°
C1'C2'C3'O3'95.9°139.0°
C1'C2'C3'C4'20.2°20.9°
C2'C1'N9O4'137.3°117.9°
C2'C1'N9H10111.5°121.1°
C2'C1'N9C8165.9°95.0°
C2'C1'O4'H10106.4°119.5°
C2'C1'O4'C4'24.6°26.5°
C1'C2'C3'H6141.4°97.4°
C1'C2'H8H9123.7°122.7°
C5N7C8N90.9°0.0°
C5N7C8H1179.2°180.0°
O3'C3'C4'H6124.3°123.6°
O3'C3'C4'C5'132.2°86.3°
O3'C3'C4'O4'107.5°155.2°
O3'C3'C4'H511.4°36.6°
O3'C3'C2'H8145.4°102.3°
O3'C3'C2'H922.9°20.4°
C3'C4'C5'O4'118.8°114.1°
C3'C4'C5'H5120.7°123.1°
C3'C4'C5'O5'141.0°179.5°
C3'C4'O4'C1'10.8°40.1°
C3'C4'O4'H5117.9°118.7°
C3'C4'C5'H321.6°60.5°
C3'C4'C5'H499.6°59.5°
C4'C3'O3'H765.3°180.0°
C4'C3'C2'H898.6°139.6°
C4'C3'C2'H9138.9°97.8°
N9C1'O4'H10111.3°121.1°
C1'N9C8N7160.8°180.0°
N9C1'O4'C4'166.8°145.9°
C1'N9C8H119.2°0.1°
N9C1'C2'H849.6°2.8°
N9C1'C2'H973.0°119.9°
C8N9C1'O4'56.8°22.8°
N9C8N7H1180.0°179.9°
C8N9C1'H1054.3°143.9°
C4'C5'O5'H3119.4°120.0°
C4'C5'O5'H4119.4°119.9°
C5'C4'O4'C1'133.1°158.6°
C5'C4'O4'H5119.7°122.8°
C4'C5'O5'P69.2°180.0°
C4'C5'H3H4121.8°119.9°
C5'C4'C3'H67.9°37.3°
O5'C5'C4'O4'100.1°66.5°
C5'O5'PO3P116.5°55.1°
C5'O5'PO2P4.5°65.0°
C5'O5'PO1P123.7°175.0°
O5'C5'H3H4121.7°120.0°
O5'C5'C4'H520.4°56.4°
C1'O4'C4'H5107.1°78.6°
O4'C1'C2'H891.5°116.6°
O4'C1'C2'H9145.9°120.7°
O4'C4'C5'H3140.5°53.6°
O4'C4'C5'H419.2°173.6°
O4'C4'C3'H6128.2°81.2°
C4'O4'C1'H1081.9°92.9°
O5'PO3PO2P122.1°120.0°
O5'PO3PO1P80.4°120.0°
O5'PO2PO1P97.1°120.0°
O5'PO1PC5A73.9°175.0°
O5'PO2PH2105.4°60.0°
PO5'C5'H3171.4°60.0°
PO5'C5'H450.2°60.1°
O3PPO2PO1P157.5°120.0°
O3PPO1PC5A158.6°55.0°
O3PPO2PH20.0°180.0°
O2PPO1PC5A44.4°65.0°
PO1PC5AC4A38.9°180.0°
O1PPO2PH2157.5°60.0°
PO1PC5AH1482.5°60.0°
PO1PC5AH15160.4°60.0°
O1PC5AC4AH14121.4°120.0°
O1PC5AC4AH15121.5°120.0°
O1PC5AC4AO4A174.2°66.4°
O1PC5AC4AC3A55.1°179.5°
O1PC5AH14H15115.3°120.0°
O1PC5AC4AH1665.0°56.4°
C5AC4AO4AC3A121.2°118.5°
C5AC4AO4AH16120.0°122.9°
C5AC4AC3AH16120.1°123.0°
C5AC4AO4AC1A121.3°158.6°
C5AC4AC3AO3A120.5°86.3°
C5AC4AC3AC2A120.4°155.5°
C4AC5AH14H15115.3°120.0°
C5AC4AC3AH171.8°37.3°
O4AC4AC3AH16119.6°118.5°
O4AC4AC3AO3A119.2°155.2°
O4AC4AC3AC2A0.1°37.0°
C4AO4AC1AN19147.6°145.9°
C4AO4AC1AC2A0.1°26.5°
O4AC4AC5AH1464.4°53.5°
O4AC4AC5AH1552.7°173.5°
O4AC4AC3AH17118.5°81.2°
C4AO4AC1AH21103.0°93.0°
C3AC4AO4AC1A0.1°40.1°
C4AC3AO3AC2A116.9°112.7°
C4AC3AO3AH17121.5°123.7°
C4AC3AC2AH17118.5°118.3°
C4AC3AC2AC1A0.0°20.9°
C3AC4AC5AH14176.5°60.5°
C3AC4AC5AH1566.4°59.5°
C4AC3AO3AH18180.0°180.0°
C4AC3AC2AH19119.4°139.6°
C4AC3AC2AH20119.5°97.9°
O4AC1AC2AC3A0.1°2.0°
O4AC1AN19C2A141.0°117.8°
O4AC1AN19H21107.9°121.2°
O4AC1AC2AH21103.6°119.6°
O4AC1AN19C1456.4°157.3°
O4AC1AN19C18175.1°22.8°
C1AO4AC4AH16118.7°78.6°
O4AC1AC2AH19119.4°116.7°
O4AC1AC2AH20119.6°120.8°
N13C12N11H23180.0°180.0°
C12N13C14N19180.0°180.0°
C12N13C14C150.1°0.1°
N13C12N11C160.1°0.1°
C14N13C12N110.1°0.0°
N13C14N19C1A46.9°0.1°
N13C14N19C15179.9°179.9°
N13C14N19C18180.0°179.9°
N13C14C15C160.1°0.1°
N13C14C15N17180.0°179.8°
C14N13C12H23179.9°180.0°
O3AC3AC2AH17122.3°123.5°
O3AC3AC2AC1A119.2°139.1°
O3AC3AC4AH160.3°36.7°
O3AC3AC2AH19121.4°102.2°
O3AC3AC2AH200.3°20.3°
C12N11C16C150.1°0.0°
C12N11C16N16180.0°179.7°
C3AC2AC1AN19143.9°121.5°
C3AC2AC1AH19119.5°118.7°
C3AC2AC1AH20119.5°118.7°
C2AC3AC4AH16119.5°81.5°
C2AC3AO3AH1863.1°67.3°
C3AC2AH19H20121.6°122.6°
C3AC2AC1AH21103.5°117.6°
N19C1AC2AH21112.6°121.0°
C1AN19C14C18133.1°179.9°
C1AN19C14C15133.0°179.8°
C1AN19C18N17130.8°180.0°
N19C1AC2AH1924.4°2.7°
N19C1AC2AH2096.6°119.8°
C1AN19C18H2249.2°0.1°
C2AC1AN19C1484.6°84.9°
C2AC1AN19C1843.8°95.0°
C1AC2AC3AH17118.5°97.4°
C1AC2AH19H20121.5°122.7°
C14N19C18N170.1°0.1°
N19C14C15C16180.0°180.0°
N19C14C15N170.1°0.3°
C14N19C1AH21164.3°36.1°
C14N19C18H22179.9°179.9°
C15C14N19C180.1°0.1°
C14C15C16N110.1°0.0°
C14C15N17C180.1°0.4°
C14C15C16N17179.8°179.6°
C14C15C16N16180.0°179.6°
N19C18N17H22180.0°179.9°
N19C18N17C150.0°0.3°
C18N19C1AH2167.3°144.0°
N11C16C15N16179.9°179.7°
N11C16C15N17180.0°179.6°
C16N11C12H23179.9°180.0°
N11C16N16H240.0°179.7°
N11C16N16H25120.0°0.3°
C18N17C15C16179.9°179.9°
C15C16N16H24179.9°0.0°
C15C16N16H2559.9°180.0°
N17C15C16N160.1°0.1°
C15N17C18H22180.0°179.9°
C16N16H24H25120.0°180.0°
H3C5'C4'H599.0°176.4°
H4C5'C4'H5139.8°63.6°
H5C4'C3'H6112.9°160.2°
H6C3'O3'H758.1°56.3°
H6C3'C2'H822.7°21.3°
H6C3'C2'H999.9°144.0°
H8C2'C1'H10161.6°123.9°
H9C2'C1'H1039.0°1.2°
H14C5AC4AH1656.4°176.4°
H15C5AC4AH16173.5°63.6°
H16C4AC3AH17121.9°160.3°
H17C3AO3AH1858.5°56.3°
H17C3AC2AH190.9°21.3°
H17C3AC2AH20122.0°143.8°
H19C2AC1AH21137.0°123.7°
H20C2AC1AH2116.0°1.2°

222415

PDB entries from 2024-07-10

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