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3XE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1sing1.43Å1.42Å
C1C2sing1.53Å1.52Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C3'O1sing1.43Å1.42Å
N2C2sing1.47Å1.45Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
N2C3sing1.47Å1.45Å
N2HN2sing1.01Å1.00Å
C3C4sing1.53Å1.52Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
F6C4sing1.40Å1.32Å
C4C11sing1.51Å1.51Å
C4F5sing1.40Å1.32Å
N1'C5'sing1.49Å1.47Å
N1'C2'sing1.49Å1.45Å
N1'HN1'sing1.01Å1.00Å
C16C11doub1.38Å1.40ÅAromatic
C11C12sing1.38Å1.40ÅAromatic
C12C13doub1.38Å1.40ÅAromatic
C12H12sing1.08Å1.08Å
C14C13sing1.38Å1.40ÅAromatic
C13H13sing1.08Å1.08Å
C15C14doub1.38Å1.40ÅAromatic
C14H14sing1.08Å1.08Å
C16C15sing1.38Å1.39ÅAromatic
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
C6AN1Adoub1.28Å1.37Å
C2AN1Asing1.46Å1.36Å
C2'C3'sing1.54Å1.53Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C3AC2Asing1.53Å1.52Å
C2AC7Asing1.53Å1.53Å
C2AH2AAsing1.09Å1.10Å
C4'C3'sing1.54Å1.52Å
C3'H3'sing1.09Å1.10Å
C4AC3Asing1.53Å1.52Å
C3AH3AAsing1.09Å1.10Å
C3AH3ABsing1.09Å1.10Å
C5'C4'sing1.54Å1.54Å
C4'C7Asing1.53Å1.54Å
C4'H4'sing1.09Å1.10Å
C8AC4Asing1.53Å1.53Å
C4AC5Asing1.53Å1.53Å
C4AH4Asing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C5AC6Asing1.50Å1.41Å
C5AH5Asing1.09Å1.10Å
C5AH5AAsing1.09Å1.10Å
C6AN6Asing1.37Å1.38Å
N6AHN6Asing0.97Å1.00Å
N6AHN6Bsing0.97Å1.00Å
C7AH7Asing1.09Å1.10Å
C7AH7AAsing1.09Å1.10Å
C8AH8Asing1.09Å1.10Å
C8AH8AAsing1.09Å1.10Å
C8AH8ABsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2107.2°109.5°
O1C1H1110.2°109.4°
O1C1H1A110.2°109.5°
C1O1C3'113.7°114.0°
C2C1H1110.2°109.4°
C2C1H1A110.2°109.5°
C1C2N2111.8°109.5°
C1C2H2108.7°109.5°
C1C2H2A108.7°109.5°
H1C1H1A108.7°109.5°
O1C3'C2'110.3°110.3°
O1C3'C4'107.4°110.3°
O1C3'H3'108.4°110.3°
N2C2H2108.7°109.5°
N2C2H2A108.7°109.5°
C2N2C3120.8°111.0°
C2N2HN2105.8°111.0°
H2C2H2A110.2°109.4°
C3N2HN2105.9°111.0°
N2C3C4110.5°109.5°
N2C3H3109.1°109.5°
N2C3H3A109.1°109.4°
C4C3H3109.1°109.5°
C4C3H3A109.1°109.5°
C3C4F6109.8°109.5°
C3C4C11108.9°109.5°
C3C4F5110.5°109.5°
H3C3H3A109.8°109.5°
F6C4C11111.1°109.4°
F6C4F5107.3°109.5°
C11C4F5109.2°109.4°
C4C11C16119.7°120.0°
C4C11C12120.3°120.0°
C5'N1'C2'111.4°104.3°
C5'N1'HN1'108.8°111.0°
N1'C5'C4'104.3°104.6°
N1'C5'H5'111.2°110.4°
N1'C5'H5'A111.3°110.4°
C2'N1'HN1'108.8°111.0°
N1'C2'C3'102.6°104.6°
N1'C2'H2'111.8°110.4°
N1'C2'H2'A111.8°110.4°
C16C11C12120.1°120.0°
C11C16C15119.8°120.0°
C11C16H16120.1°120.0°
C11C12C13120.5°120.0°
C11C12H12119.8°120.0°
C13C12H12119.7°120.0°
C12C13C14118.7°120.1°
C12C13H13120.6°120.0°
C14C13H13120.7°119.9°
C13C14C15121.1°120.0°
C13C14H14119.5°120.1°
C15C14H14119.5°119.9°
C14C15C16119.9°120.0°
C14C15H15120.1°120.0°
C16C15H15120.1°120.0°
C15C16H16120.1°120.0°
C6AN1AC2A122.9°125.0°
N1AC6AC5A121.4°124.3°
N1AC6AN6A121.0°117.9°
N1AC2AC3A117.5°110.5°
N1AC2AC7A119.5°109.3°
N1AC2AH2AA96.2°109.2°
C3'C2'H2'111.9°110.4°
C3'C2'H2'A111.9°110.4°
C2'C3'C4'102.9°105.1°
C2'C3'H3'112.5°110.4°
H2'C2'H2'A107.0°110.5°
C3AC2AC7A117.1°109.3°
C3AC2AH2AA101.2°109.3°
C2AC3AC4A105.8°108.4°
C2AC3AH3AA110.7°109.7°
C2AC3AH3AB110.7°109.6°
C7AC2AH2AA97.0°109.3°
C2AC7AC4'107.8°109.5°
C2AC7AH7A110.0°109.5°
C2AC7AH7AA110.0°109.4°
C4'C3'H3'115.2°110.4°
C3'C4'C5'102.0°105.1°
C3'C4'C7A115.4°110.4°
C3'C4'H4'112.5°110.3°
C4AC3AH3AA110.7°109.7°
C4AC3AH3AB110.7°109.7°
C3AC4AC8A112.8°109.7°
C3AC4AC5A112.7°108.1°
C3AC4AH4A106.4°109.8°
H3AAC3AH3AB108.2°109.7°
C5'C4'C7A114.3°110.3°
C5'C4'H4'113.6°110.4°
C4'C5'H5'111.2°110.5°
C4'C5'H5'A111.2°110.4°
C7AC4'H4'99.6°110.3°
C4'C7AH7A110.0°109.5°
C4'C7AH7AA110.0°109.5°
C8AC4AC5A113.9°109.7°
C8AC4AH4A105.0°109.7°
C4AC8AH8A109.5°109.5°
C4AC8AH8AA109.5°109.5°
C4AC8AH8AB109.5°109.5°
C5AC4AH4A105.0°109.7°
C4AC5AC6A114.9°109.9°
C4AC5AH5A107.7°109.4°
C4AC5AH5AA107.7°109.4°
H5'C5'H5'A107.6°110.5°
C6AC5AH5A107.7°109.4°
C6AC5AH5AA107.7°109.4°
C5AC6AN6A117.6°117.9°
H5AC5AH5AA111.2°109.3°
C6AN6AHN6A120.0°120.0°
C6AN6AHN6B120.0°120.0°
HN6AN6AHN6B120.1°120.0°
H7AC7AH7AA108.9°109.4°
H8AC8AH8AA109.4°109.5°
H8AC8AH8AB109.5°109.4°
H8AAC8AH8AB109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2H1120.0°119.9°
O1C1C2H1A120.0°120.1°
O1C1H1H1A120.9°120.0°
O1C1C2N271.6°64.9°
O1C1C2H2168.4°175.0°
O1C1C2H2A48.4°55.1°
C1O1C3'C2'85.1°91.5°
C1O1C3'C4'163.5°152.9°
C1O1C3'H3'38.4°30.7°
C2C1H1H1A120.9°120.0°
C2C1O1C3'178.3°180.0°
C1C2N2H2120.0°120.1°
C1C2N2H2A120.0°120.0°
C1C2H2H2A119.0°119.9°
C1C2N2C3165.1°180.0°
C1C2N2HN245.1°56.0°
H1C1O1C3'58.3°60.0°
H1C1C2N248.4°55.0°
H1C1C2H271.6°65.1°
H1C1C2H2A168.4°175.0°
H1AC1O1C3'61.7°60.0°
H1AC1C2N2168.4°175.0°
H1AC1C2H248.4°54.9°
H1AC1C2H2A71.6°65.0°
O1C3'C2'N1'77.3°142.7°
O1C3'C2'C4'114.3°118.9°
O1C3'C2'H3'121.2°122.1°
O1C3'C2'H2'42.7°24.0°
O1C3'C2'H2'A162.7°98.5°
O1C3'C4'H3'120.9°122.1°
O1C3'C4'C5'76.0°118.9°
O1C3'C4'C7A48.6°0.0°
O1C3'C4'H4'162.0°122.1°
N2C2H2H2A119.1°120.0°
C2N2C3HN2120.0°124.0°
C2N2C3C476.2°180.0°
C2N2C3H343.8°59.9°
C2N2C3H3A163.8°60.0°
H2C2N2C374.9°59.9°
H2C2N2HN2165.1°176.1°
H2AC2N2C345.1°60.0°
H2AC2N2HN274.9°64.0°
N2C3C4H3120.0°120.0°
N2C3C4H3A120.0°120.0°
N2C3H3H3A119.6°120.0°
N2C3C4F643.7°60.1°
N2C3C4C11165.6°180.0°
N2C3C4F574.5°60.0°
HN2N2C3C4163.8°56.0°
HN2N2C3H376.2°176.0°
HN2N2C3H3A43.8°64.0°
C4C3H3H3A119.6°120.0°
C3C4F6C11120.5°120.0°
C3C4F6F5120.2°120.1°
C3C4C11F5120.8°120.0°
C3C4C11C1680.5°90.2°
C3C4C11C1299.8°90.0°
H3C3C4F6163.7°60.0°
H3C3C4C1174.4°60.0°
H3C3C4F545.5°180.0°
H3AC3C4F676.3°180.0°
H3AC3C4C1145.6°60.0°
H3AC3C4F5165.5°60.0°
F6C4C11F5118.1°120.0°
F6C4C11C1640.5°29.7°
F6C4C11C12139.1°150.0°
C4C11C16C12179.7°179.7°
C4C11C12C13179.5°180.0°
C4C11C12H120.5°0.1°
C4C11C16C15179.6°179.7°
C4C11C16H160.4°0.0°
F5C4C11C16158.7°149.7°
F5C4C11C1221.0°30.0°
C5'N1'C2'HN1'120.0°119.5°
C5'N1'C2'C3'19.4°39.5°
C5'N1'C2'H2'139.4°79.2°
C5'N1'C2'H2'A100.7°158.3°
N1'C5'C4'C3'28.6°23.8°
N1'C5'C4'H5'120.0°118.8°
N1'C5'C4'H5'A120.0°118.8°
N1'C5'C4'C7A153.9°142.8°
N1'C5'C4'H4'92.7°95.1°
N1'C5'H5'H5'A122.1°122.4°
N1'C2'C3'H2'120.0°118.7°
N1'C2'C3'H2'A120.0°118.8°
N1'C2'H2'H2'A122.8°122.5°
N1'C2'C3'C4'37.0°23.9°
N1'C2'C3'H3'161.5°95.2°
C2'N1'C5'C4'5.7°39.5°
C2'N1'C5'H5'125.7°158.3°
C2'N1'C5'H5'A114.3°79.3°
HN1'N1'C2'C3'100.6°159.0°
HN1'N1'C2'H2'19.4°40.3°
HN1'N1'C2'H2'A139.3°82.2°
HN1'N1'C5'C4'125.7°159.0°
HN1'N1'C5'H5'114.3°82.2°
HN1'N1'C5'H5'A5.7°40.3°
C16C11C12C130.8°0.3°
C16C11C12H12179.2°179.8°
C11C16C15C140.5°0.6°
C11C16C15H16180.0°179.7°
C11C16C15H15179.5°179.7°
C11C12C13H12180.0°179.9°
C11C12C13C141.3°0.0°
C11C12C13H13178.7°179.9°
C12C11C16C150.1°0.6°
C12C11C16H16179.9°179.7°
C12C13C14H13180.0°179.9°
C12C13C14C150.9°0.0°
C12C13C14H14179.1°180.0°
H12C12C13C14178.7°179.9°
H12C12C13H131.3°0.0°
C13C14C15H14180.0°180.0°
C13C14C15C160.0°0.3°
C13C14C15H15180.0°180.0°
H13C13C14C15179.1°179.9°
H13C13C14H140.9°0.1°
C14C15C16H15180.0°179.7°
C14C15C16H16179.5°179.7°
H14C14C15C16180.0°179.7°
H14C14C15H150.0°0.0°
H15C15C16H160.5°0.0°
C6AN1AC2AC3A22.9°17.8°
C6AN1AC2AC7A175.2°138.1°
C6AN1AC2AH2AA83.2°102.5°
N1AC6AC5AC4A11.7°16.3°
N1AC6AC5AN6A178.0°179.9°
N1AC6AC5AH5A108.3°103.8°
N1AC6AC5AH5AA131.7°136.5°
N1AC6AN6AHN6A0.0°180.0°
N1AC6AN6AHN6B180.0°0.1°
N1AC2AC3AC7A153.0°120.3°
N1AC2AC3AH2AA103.1°120.2°
N1AC2AC7AH2AA101.2°119.4°
N1AC2AC3AC4A47.4°49.7°
N1AC2AC3AH3AA72.6°70.1°
N1AC2AC3AH3AB167.5°169.4°
N1AC2AC7AC4'115.7°64.9°
C2AN1AC6AC5A3.1°0.6°
C2AN1AC6AN6A178.9°179.4°
N1AC2AC7AH7A124.3°175.0°
N1AC2AC7AH7AA4.3°55.1°
C3'C2'H2'H2'A122.8°122.4°
C2'C3'C4'H3'122.8°119.0°
C2'C3'C4'C5'40.4°0.0°
C2'C3'C4'C7A164.9°118.9°
C2'C3'C4'H4'81.7°119.0°
H2'C2'C3'C4'157.0°94.9°
H2'C2'C3'H3'78.5°146.1°
H2'AC2'C3'C4'83.0°142.6°
H2'AC2'C3'H3'41.5°23.6°
C3AC2AC7AH2AA106.4°119.5°
C2AC3AC4AH3AA120.0°119.8°
C2AC3AC4AH3AB120.0°119.7°
C2AC3AH3AAH3AB121.5°120.4°
C3AC2AC7AC4'91.9°174.0°
C2AC3AC4AC8A174.6°174.2°
C2AC3AC4AC5A54.6°66.2°
C2AC3AC4AH4A60.0°53.5°
C3AC2AC7AH7A28.1°53.9°
C3AC2AC7AH7AA148.1°66.0°
C2AC7AC4'C3'175.6°175.0°
C7AC2AC3AC4A159.6°170.0°
C7AC2AC3AH3AA80.4°50.2°
C7AC2AC3AH3AB39.6°70.3°
C2AC7AC4'C5'66.5°69.3°
C2AC7AC4'H7A120.0°120.0°
C2AC7AC4'H7AA120.0°120.0°
C2AC7AC4'H4'54.9°52.9°
C2AC7AH7AH7AA120.7°119.9°
H2AAC2AC3AC4A55.7°70.5°
H2AAC2AC3AH3AA175.7°169.7°
H2AAC2AC3AH3AB64.3°49.2°
H2AAC2AC7AC4'14.5°54.5°
H2AAC2AC7AH7A134.5°65.6°
H2AAC2AC7AH7AA105.5°174.5°
C3'C4'C5'C7A125.3°118.9°
C3'C4'C5'H4'121.3°118.9°
C3'C4'C7AH4'120.7°122.1°
C3'C4'C5'H5'148.6°142.6°
C3'C4'C5'H5'A91.4°94.9°
C3'C4'C7AH7A55.6°55.0°
C3'C4'C7AH7AA64.4°65.0°
H3'C3'C4'C5'163.2°119.0°
H3'C3'C4'C7A72.3°122.1°
H3'C3'C4'H4'41.1°0.0°
C4AC3AH3AAH3AB121.5°120.6°
C3AC4AC8AC5A130.1°118.7°
C3AC4AC8AH4A115.5°120.7°
C3AC4AC5AH4A115.4°119.7°
C3AC4AC5AC6A39.6°47.9°
C3AC4AC5AH5A80.4°72.3°
C3AC4AC5AH5AA159.6°168.0°
C3AC4AC8AH8A180.0°60.0°
C3AC4AC8AH8AA60.0°180.0°
C3AC4AC8AH8AB60.0°60.0°
H3AAC3AC4AC8A65.3°66.1°
H3AAC3AC4AC5A65.4°53.6°
H3AAC3AC4AH4A180.0°173.3°
H3ABC3AC4AC8A54.6°54.5°
H3ABC3AC4AC5A174.6°174.1°
H3ABC3AC4AH4A60.0°66.2°
C5'C4'C7AH4'121.5°122.2°
C4'C5'H5'H5'A122.1°122.5°
C5'C4'C7AH7A173.5°170.6°
C5'C4'C7AH7AA53.5°50.7°
C7AC4'C5'H5'86.1°98.5°
C7AC4'C5'H5'A33.9°24.0°
C4'C7AH7AH7AA120.7°120.0°
H4'C4'C5'H5'27.3°23.7°
H4'C4'C5'H5'A147.3°146.2°
H4'C4'C7AH7A65.1°67.1°
H4'C4'C7AH7AA174.9°172.9°
C8AC4AC5AH4A114.4°120.6°
C8AC4AC5AC6A169.8°167.6°
C8AC4AC5AH5A49.8°47.4°
C8AC4AC5AH5AA70.3°72.3°
C4AC8AH8AH8AA120.0°120.0°
C4AC8AH8AH8AB120.0°120.0°
C4AC8AH8AAH8AB120.0°120.0°
C4AC5AC6AH5A120.0°120.2°
C4AC5AC6AH5AA120.0°120.2°
C4AC5AH5AH5AA117.8°119.8°
C4AC5AC6AN6A170.3°163.6°
C5AC4AC8AH8A49.8°178.7°
C5AC4AC8AH8AA70.2°61.3°
C5AC4AC8AH8AB169.8°58.7°
H4AC4AC5AC6A75.8°71.8°
H4AC4AC5AH5A164.2°168.0°
H4AC4AC5AH5AA44.1°48.3°
H4AC4AC8AH8A64.6°60.7°
H4AC4AC8AH8AA175.4°59.3°
H4AC4AC8AH8AB55.4°179.3°
C6AC5AH5AH5AA117.8°119.7°
C5AC6AN6AHN6A178.0°0.0°
C5AC6AN6AHN6B2.0°180.0°
H5AC5AC6AN6A69.7°76.2°
H5AAC5AC6AN6A50.3°43.5°
C6AN6AHN6AHN6B180.0°179.9°
H8AC8AH8AAH8AB120.0°120.0°

222415

PDB entries from 2024-07-10

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