3WU
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | O | doub | 1.21Å | 1.23Å | |
C | C6 | sing | 1.51Å | 1.56Å | |
C3 | C4 | sing | 1.55Å | 1.51Å | |
C3 | CA | sing | 1.55Å | 1.53Å | |
C6 | C7 | sing | 1.53Å | 1.53Å | |
C6 | C5 | sing | 1.53Å | 1.56Å | |
C4 | C1 | sing | 1.54Å | 1.52Å | |
C9 | O1 | sing | 1.43Å | 1.44Å | |
CA | C5 | sing | 1.53Å | 1.53Å | |
CA | N | sing | 1.48Å | 1.47Å | |
C5 | O1 | sing | 1.43Å | 1.43Å | |
C1 | N | sing | 1.47Å | 1.47Å | |
C4 | H13 | sing | 1.09Å | 1.10Å | |
C4 | H14 | sing | 1.09Å | 1.10Å | |
C7 | H16 | sing | 1.09Å | 1.10Å | |
C7 | H17 | sing | 1.09Å | 1.10Å | |
C7 | H18 | sing | 1.09Å | 1.10Å | |
C6 | H19 | sing | 1.09Å | 1.10Å | |
C9 | H20 | sing | 1.09Å | 1.10Å | |
C9 | H21 | sing | 1.09Å | 1.10Å | |
C9 | H22 | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C3 | H33 | sing | 1.09Å | 1.10Å | |
C3 | H34 | sing | 1.09Å | 1.10Å | |
C1 | H35 | sing | 1.09Å | 1.10Å | |
C1 | H36 | sing | 1.09Å | 1.10Å | |
C5 | H37 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N | H | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | C6 | 124.5° | 120.0° |
O | C | OXT | 123.6° | 120.0° |
C | C6 | C7 | 106.9° | 109.5° |
C | C6 | C5 | 112.7° | 109.5° |
C | C6 | H19 | 107.2° | 109.4° |
C6 | C | OXT | 111.9° | 120.0° |
C4 | C3 | CA | 104.6° | 101.7° |
C3 | C4 | C1 | 107.7° | 103.0° |
C3 | C4 | H13 | 109.9° | 110.7° |
C3 | C4 | H14 | 109.9° | 110.8° |
C4 | C3 | H33 | 110.6° | 111.0° |
C4 | C3 | H34 | 110.6° | 111.0° |
C3 | CA | C5 | 120.7° | 110.4° |
C3 | CA | N | 102.9° | 104.8° |
C3 | CA | HA | 104.7° | 110.4° |
CA | C3 | H33 | 110.7° | 111.0° |
CA | C3 | H34 | 110.7° | 111.0° |
C7 | C6 | C5 | 114.8° | 109.5° |
C6 | C7 | H16 | 109.5° | 109.5° |
C6 | C7 | H17 | 109.5° | 109.5° |
C6 | C7 | H18 | 109.5° | 109.5° |
C7 | C6 | H19 | 107.6° | 109.5° |
C6 | C5 | CA | 116.8° | 109.5° |
C6 | C5 | O1 | 112.9° | 109.4° |
C5 | C6 | H19 | 107.3° | 109.5° |
C6 | C5 | H37 | 102.1° | 109.5° |
C4 | C1 | N | 104.0° | 107.3° |
C1 | C4 | H13 | 109.9° | 110.7° |
C1 | C4 | H14 | 109.9° | 110.7° |
C4 | C1 | H35 | 110.8° | 109.9° |
C4 | C1 | H36 | 110.8° | 110.0° |
C9 | O1 | C5 | 117.1° | 114.0° |
O1 | C9 | H20 | 109.5° | 109.4° |
O1 | C9 | H21 | 109.5° | 109.5° |
O1 | C9 | H22 | 109.5° | 109.5° |
C5 | CA | N | 117.0° | 110.4° |
CA | C5 | O1 | 116.6° | 109.5° |
C5 | CA | HA | 104.7° | 110.4° |
CA | C5 | H37 | 102.3° | 109.5° |
CA | N | C1 | 112.0° | 108.6° |
N | CA | HA | 105.3° | 110.4° |
CA | N | H | 108.8° | 110.9° |
O1 | C5 | H37 | 103.2° | 109.5° |
N | C1 | H35 | 110.8° | 109.8° |
N | C1 | H36 | 110.8° | 109.9° |
C1 | N | H | 108.8° | 111.0° |
H13 | C4 | H14 | 109.5° | 110.6° |
H16 | C7 | H17 | 109.5° | 109.5° |
H16 | C7 | H18 | 109.5° | 109.5° |
H17 | C7 | H18 | 109.5° | 109.4° |
H20 | C9 | H21 | 109.4° | 109.4° |
H20 | C9 | H22 | 109.5° | 109.5° |
H21 | C9 | H22 | 109.5° | 109.5° |
H33 | C3 | H34 | 109.5° | 110.9° |
H35 | C1 | H36 | 109.5° | 110.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | C6 | OXT | 179.7° | 180.0° |
O | C | C6 | C7 | 55.4° | 139.9° |
O | C | C6 | C5 | 71.6° | 19.9° |
O | C | C6 | H19 | 170.5° | 100.1° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | C6 | C7 | C5 | 125.8° | 120.0° |
C | C6 | C7 | H19 | 114.9° | 119.9° |
C | C6 | C5 | H19 | 117.8° | 120.0° |
C | C6 | C5 | CA | 32.6° | 53.7° |
C | C6 | C5 | O1 | 171.9° | 66.3° |
C | C6 | C7 | H16 | 180.0° | 166.9° |
C | C6 | C7 | H17 | 60.0° | 46.9° |
C | C6 | C7 | H18 | 60.0° | 73.1° |
C | C6 | C5 | H37 | 78.0° | 173.7° |
C6 | C | OXT | HXT | 179.7° | 180.0° |
C4 | C3 | CA | H33 | 119.2° | 118.1° |
C4 | C3 | CA | H34 | 119.2° | 118.1° |
C3 | C4 | C1 | H13 | 119.7° | 118.4° |
C3 | C4 | C1 | H14 | 119.7° | 118.6° |
C4 | C3 | CA | C5 | 103.3° | 155.9° |
C4 | C3 | CA | N | 29.5° | 37.1° |
C3 | C4 | C1 | N | 8.9° | 22.3° |
C3 | C4 | H13 | H14 | 120.9° | 123.2° |
C4 | C3 | CA | HA | 139.3° | 81.8° |
C4 | C3 | H33 | H34 | 122.2° | 123.9° |
C3 | C4 | C1 | H35 | 128.0° | 97.1° |
C3 | C4 | C1 | H36 | 110.2° | 141.7° |
C3 | CA | C5 | C6 | 72.6° | 178.9° |
CA | C3 | C4 | C1 | 24.1° | 35.6° |
C3 | CA | C5 | N | 126.5° | 115.3° |
C3 | CA | C5 | HA | 117.4° | 122.4° |
C3 | CA | N | HA | 109.4° | 118.9° |
C3 | CA | C5 | O1 | 65.2° | 58.9° |
C3 | CA | N | C1 | 25.5° | 24.1° |
CA | C3 | C4 | H13 | 95.6° | 154.0° |
CA | C3 | C4 | H14 | 143.9° | 82.8° |
CA | C3 | H33 | H34 | 122.3° | 123.8° |
C3 | CA | C5 | H37 | 176.9° | 61.1° |
C3 | CA | N | H | 94.9° | 146.3° |
C7 | C6 | C5 | H19 | 119.5° | 120.0° |
C7 | C6 | C5 | CA | 155.3° | 66.3° |
C7 | C6 | C5 | O1 | 65.4° | 173.7° |
C6 | C7 | H16 | H17 | 120.0° | 120.0° |
C6 | C7 | H16 | H18 | 120.0° | 120.0° |
C6 | C7 | H17 | H18 | 120.0° | 120.0° |
C7 | C6 | C5 | H37 | 44.7° | 53.7° |
C7 | C6 | C | OXT | 124.4° | 40.1° |
C6 | C5 | O1 | C9 | 46.5° | 91.6° |
C6 | C5 | CA | O1 | 137.8° | 120.0° |
C6 | C5 | CA | H37 | 110.5° | 120.0° |
C6 | C5 | CA | N | 160.9° | 65.8° |
C6 | C5 | O1 | H37 | 109.4° | 120.0° |
C5 | C6 | C7 | H16 | 54.2° | 46.9° |
C5 | C6 | C7 | H17 | 65.8° | 73.1° |
C5 | C6 | C7 | H18 | 174.2° | 166.9° |
C6 | C5 | CA | HA | 44.8° | 56.5° |
C5 | C6 | C | OXT | 108.6° | 160.1° |
C4 | C1 | N | CA | 10.7° | 1.0° |
C4 | C1 | N | H35 | 119.1° | 119.4° |
C4 | C1 | N | H36 | 119.1° | 119.5° |
C1 | C4 | H13 | H14 | 120.8° | 123.1° |
C1 | C4 | C3 | H33 | 95.1° | 153.7° |
C1 | C4 | C3 | H34 | 143.4° | 82.4° |
C4 | C1 | H35 | H36 | 122.5° | 121.2° |
C4 | C1 | N | H | 109.6° | 123.2° |
C9 | O1 | C5 | CA | 92.9° | 148.4° |
O1 | C9 | H20 | H21 | 120.0° | 120.0° |
O1 | C9 | H20 | H22 | 120.0° | 120.0° |
O1 | C9 | H21 | H22 | 120.0° | 120.0° |
C9 | O1 | C5 | H37 | 155.9° | 28.4° |
C5 | CA | N | HA | 115.7° | 122.3° |
CA | C5 | O1 | H37 | 111.2° | 120.0° |
C5 | CA | N | C1 | 109.3° | 142.9° |
CA | C5 | C6 | H19 | 85.2° | 173.7° |
C5 | CA | C3 | H33 | 137.5° | 86.0° |
C5 | CA | C3 | H34 | 15.9° | 37.8° |
C5 | CA | N | H | 130.3° | 94.8° |
N | CA | C5 | O1 | 61.3° | 174.2° |
CA | N | C1 | H | 120.4° | 122.2° |
N | CA | C3 | H33 | 89.7° | 155.2° |
N | CA | C3 | H34 | 148.7° | 81.0° |
CA | N | C1 | H35 | 108.4° | 120.5° |
CA | N | C1 | H36 | 129.9° | 118.5° |
N | CA | C5 | H37 | 50.4° | 54.2° |
O1 | C5 | C6 | H19 | 54.1° | 53.7° |
C5 | O1 | C9 | H20 | 180.0° | 176.7° |
C5 | O1 | C9 | H21 | 60.0° | 63.4° |
C5 | O1 | C9 | H22 | 60.0° | 56.7° |
O1 | C5 | CA | HA | 177.4° | 63.5° |
N | C1 | C4 | H13 | 110.8° | 140.6° |
N | C1 | C4 | H14 | 128.7° | 96.3° |
C1 | N | CA | HA | 134.9° | 94.8° |
N | C1 | H35 | H36 | 122.5° | 121.0° |
H13 | C4 | C3 | H33 | 145.2° | 87.9° |
H13 | C4 | C3 | H34 | 23.7° | 36.0° |
H13 | C4 | C1 | H35 | 8.3° | 21.2° |
H13 | C4 | C1 | H36 | 130.1° | 99.9° |
H14 | C4 | C3 | H33 | 24.7° | 35.2° |
H14 | C4 | C3 | H34 | 96.9° | 159.1° |
H14 | C4 | C1 | H35 | 112.2° | 144.3° |
H14 | C4 | C1 | H36 | 9.5° | 23.1° |
H16 | C7 | H17 | H18 | 120.0° | 120.0° |
H16 | C7 | C6 | H19 | 65.1° | 73.2° |
H17 | C7 | C6 | H19 | 174.9° | 166.8° |
H18 | C7 | C6 | H19 | 54.9° | 46.8° |
H19 | C6 | C5 | H37 | 164.2° | 66.3° |
H19 | C6 | C | OXT | 9.2° | 79.9° |
H20 | C9 | H21 | H22 | 120.0° | 120.0° |
HA | CA | C3 | H33 | 20.1° | 36.3° |
HA | CA | C3 | H34 | 101.5° | 160.1° |
HA | CA | C5 | H37 | 65.7° | 176.5° |
HA | CA | N | H | 14.5° | 27.5° |
H35 | C1 | N | H | 131.3° | 117.4° |
H36 | C1 | N | H | 9.5° | 3.7° |