Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3W5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.38Å1.37ÅAromatic
C1C6doub1.40Å1.37ÅAromatic
C2C3doub1.39Å1.39ÅAromatic
C3C4sing1.39Å1.37ÅAromatic
C3O2sing1.36Å1.36Å
C4C5doub1.38Å1.38ÅAromatic
C5C6sing1.40Å1.38ÅAromatic
C6C7sing1.43Å1.40Å
C7C8trip1.17Å1.20Å
C8C9sing1.47Å1.44Å
C9C10sing1.53Å1.52Å
C9C13sing1.53Å1.55Å
C9O1sing1.43Å1.42Å
C10N1sing1.47Å1.50Å
N1C11sing1.47Å1.51Å
N1C15sing1.47Å1.51Å
C11C12sing1.53Å1.53Å
C12C13sing1.53Å1.54Å
C13C14sing1.53Å1.55Å
C14C15sing1.53Å1.55Å
O2C16sing1.36Å1.37Å
C16C17doub1.39Å1.38ÅAromatic
C16C21sing1.39Å1.38ÅAromatic
C17C18sing1.38Å1.39ÅAromatic
C18C19doub1.40Å1.37ÅAromatic
C19C20sing1.40Å1.37ÅAromatic
C19C22sing1.48Å1.47Å
C20C21doub1.38Å1.39ÅAromatic
C22O3doub1.22Å1.22Å
C22N2sing1.35Å1.40Å
N2C23sing1.46Å1.45Å
C23C24sing1.53Å1.51Å
C23C27sing1.53Å1.50Å
C24C25sing1.53Å1.53Å
C25C26sing1.53Å1.51Å
C26S1sing1.82Å1.75Å
S1O4doub1.42Å1.46Å
S1O5doub1.42Å1.46Å
S1C27sing1.82Å1.80Å
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
O1HAsing0.97Å0.95Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C17H17sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
N2HBsing0.97Å1.00Å
C23H23sing1.09Å1.10Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C26H261sing1.09Å1.10Å
C26H262sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6118.3°119.9°
C1C2C3118.7°120.1°
C2C1H1120.8°120.1°
C1C2H2120.7°119.9°
C1C6C5123.5°119.8°
C1C6C7121.6°120.1°
C6C1H1120.8°120.0°
C2C3C4122.8°120.2°
C2C3O2123.1°119.9°
C3C2H2120.6°120.0°
C4C3O2114.1°119.9°
C3C4C5118.8°120.1°
C3C4H4120.6°120.0°
C3O2C16121.9°118.0°
C4C5C6117.9°119.9°
C5C4H4120.6°120.0°
C4C5H5121.0°120.1°
C5C6C7114.8°120.1°
C6C5H5121.1°120.0°
C6C7C8177.2°179.9°
C7C8C9177.4°179.9°
C8C9C10105.0°109.6°
C8C9C13114.1°109.6°
C8C9O1103.3°109.6°
C10C9C13110.0°108.9°
C10C9O1114.4°109.6°
C9C10N1108.1°109.4°
C9C10H101109.8°109.5°
C9C10H102109.8°109.5°
C13C9O1110.0°109.7°
C9C13C12106.4°108.6°
C9C13C14110.2°108.6°
C9C13H13110.8°110.2°
C9O1HA109.5°114.0°
C10N1C11110.5°111.1°
C10N1C15111.0°111.0°
N1C10H101109.8°109.5°
N1C10H102109.8°109.4°
C11N1C15114.5°110.9°
N1C11C12106.4°109.4°
N1C11H111110.2°109.5°
N1C11H112110.2°109.5°
N1C15C14106.3°109.4°
N1C15H151110.2°109.5°
N1C15H152110.3°109.5°
C11C12C13111.5°108.8°
C12C11H111110.3°109.5°
C12C11H112110.2°109.5°
C11C12H121108.9°109.6°
C11C12H122109.0°109.6°
C12C13C14107.7°108.6°
C12C13H13110.9°110.1°
C13C12H121109.0°109.6°
C13C12H122109.0°109.6°
C13C14C15110.4°108.8°
C14C13H13110.7°110.7°
C13C14H141109.2°109.6°
C13C14H142109.2°109.6°
C14C15H151110.3°109.5°
C14C15H152110.3°109.5°
C15C14H141109.3°109.5°
C15C14H142109.3°109.6°
O2C16C17125.1°119.9°
O2C16C21114.3°119.9°
C17C16C21120.5°120.2°
C16C17C18119.0°120.1°
C16C17H17120.5°120.0°
C16C21C20120.2°120.1°
C16C21H21119.9°119.9°
C17C18C19120.0°119.9°
C18C17H17120.5°120.0°
C17C18H18120.0°120.0°
C18C19C20121.3°119.8°
C18C19C22121.4°120.1°
C19C18H18120.0°120.0°
C20C19C22117.2°120.1°
C19C20C21119.0°119.9°
C19C20H20120.5°120.1°
C19C22O3120.4°120.0°
C19C22N2111.0°120.0°
C20C21H21119.9°120.0°
C21C20H20120.5°120.0°
O3C22N2128.4°120.0°
C22N2C23129.0°120.0°
C22N2HB115.5°120.0°
N2C23C24115.5°109.4°
N2C23C27108.3°109.4°
C23N2HB115.5°120.0°
N2C23H23107.4°109.4°
C24C23C27111.6°110.0°
C23C24C25113.3°110.7°
C24C23H23106.8°109.4°
C23C24H241108.5°109.2°
C23C24H242108.5°109.2°
C23C27S1113.9°109.0°
C27C23H23106.8°109.3°
C23C27H271108.4°109.5°
C23C27H272108.4°109.6°
C24C25C26108.8°110.0°
C25C24H241108.5°109.3°
C25C24H242108.5°109.3°
C24C25H251109.6°109.3°
C24C25H252109.6°109.4°
C25C26S199.2°109.0°
C26C25H251109.6°109.4°
C26C25H252109.6°109.4°
C25C26H261112.0°109.6°
C25C26H262112.0°109.5°
C26S1O4115.1°108.7°
C26S1O598.0°108.7°
C26S1C27108.7°101.3°
S1C26H261112.0°109.6°
S1C26H262112.0°109.5°
O4S1O5125.9°119.3°
O4S1C27102.0°108.6°
O5S1C27106.3°108.8°
S1C27H271108.3°109.6°
S1C27H272108.3°109.6°
H101C10H102109.5°109.5°
H111C11H112109.5°109.5°
H151C15H152109.5°109.5°
H121C12H122109.5°109.7°
H141C14H142109.4°109.7°
H241C24H242109.5°109.2°
H271C27H272109.5°109.6°
H251C25H252109.5°109.3°
H261C26H262109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2C3H2180.0°179.9°
C1C2C3C41.1°0.1°
C1C2C3O2179.3°179.9°
C2C1C6C50.3°0.1°
C2C1C6C7178.9°180.0°
C6C1C2C30.4°0.1°
C1C6C5C40.4°0.1°
C1C6C5C7179.3°179.9°
C1C6C7C864.0°102.2°
C6C1C2H2179.6°179.9°
C1C6C5H5179.6°179.9°
C2C3C4O2179.7°180.0°
C2C3C4C51.0°0.1°
C2C3O2C1647.8°67.4°
C3C2C1H1179.6°179.7°
C2C3C4H4179.0°180.0°
C3C4C5H4180.0°179.9°
C3C4C5C60.3°0.1°
C4C3O2C16131.8°112.6°
C4C3C2H2178.9°179.9°
C3C4C5H5179.7°179.9°
O2C3C4C5179.3°179.9°
C3O2C16C1717.9°6.1°
C3O2C16C21163.3°173.6°
O2C3C2H20.7°0.1°
O2C3C4H40.7°0.0°
C4C5C6H5180.0°180.0°
C4C5C6C7178.9°180.0°
C5C6C7C8115.3°77.9°
C5C6C1H1179.7°179.8°
C6C5C4H4179.7°180.0°
C6C7C8C978.1°163.9°
C7C6C1H11.1°0.3°
C7C6C5H51.1°0.0°
C7C8C9C1050.5°86.0°
C7C8C9C1370.0°33.4°
C7C8C9O1170.7°153.7°
C8C9C10C13123.2°119.9°
C8C9C10O1112.5°120.2°
C8C9C13O1115.5°120.3°
C8C9C10N1126.5°119.9°
C8C9C13C12178.7°178.8°
C8C9C13C1462.2°60.9°
C8C9C10H1016.8°0.1°
C8C9C10H102113.7°120.2°
C8C9C13H1360.7°60.6°
C8C9O1HA180.0°59.9°
C10C9C13O1126.8°119.9°
C9C10N1H101119.8°120.0°
C9C10N1H102119.8°120.0°
C9C10N1C1161.9°61.9°
C9C10N1C1566.3°62.0°
C10C9C13C1261.0°59.0°
C10C9C13C1455.4°59.0°
C9C10H101H102120.7°120.1°
C10C9C13H13178.3°179.6°
C10C9O1HA66.5°60.3°
C13C9C10N13.3°0.0°
C9C13C12C1157.9°59.0°
C9C13C12C14118.1°117.9°
C9C13C12H13120.6°120.7°
C9C13C14H13122.9°121.1°
C9C13C14C1555.9°59.0°
C13C9C10H101116.5°120.0°
C13C9C10H102123.1°119.9°
C13C9O1HA57.8°179.7°
C9C13C12H121178.2°178.8°
C9C13C12H12262.5°60.8°
C9C13C14H141176.1°178.8°
C9C13C14H14264.2°60.8°
O1C9C10N1121.0°119.9°
O1C9C13C1265.8°60.9°
O1C9C13C14177.7°178.8°
O1C9C10H101119.2°120.1°
O1C9C10H1021.2°0.0°
O1C9C13H1354.9°59.7°
C10N1C11C15126.3°124.0°
C10N1C11C1264.8°61.9°
C10N1C15C1464.9°61.9°
N1C10H101H102120.6°119.9°
C10N1C11H111175.6°178.1°
C10N1C11H11254.7°58.0°
C10N1C15H15154.6°58.0°
C10N1C15H152175.6°178.1°
N1C11C12H111119.5°120.0°
N1C11C12H112119.5°119.9°
N1C11C12C132.5°0.1°
C11N1C15C1461.2°62.1°
C11N1C10H101178.4°178.0°
C11N1C10H10257.9°58.0°
N1C11H111H112121.4°120.0°
C11N1C15H151179.3°178.0°
C11N1C15H15258.3°57.9°
N1C11C12H121117.9°119.9°
N1C11C12H122122.8°119.7°
C15N1C11C1261.4°62.1°
N1C15C14C132.3°0.1°
N1C15C14H151119.5°119.9°
N1C15C14H152119.5°120.0°
C15N1C10H10153.5°58.1°
C15N1C10H102173.9°178.1°
C15N1C11H11158.1°57.9°
C15N1C11H112179.1°178.0°
N1C15H151H152121.5°120.0°
N1C15C14H141117.8°119.9°
N1C15C14H142122.5°119.7°
C11C12C13H121120.3°119.8°
C11C12C13H122120.3°119.8°
C11C12C13C1460.2°59.0°
C11C12C13H13178.5°179.7°
C12C11H111H112121.5°120.0°
C11C12H121H122119.0°120.3°
C12C13C14H13121.4°121.0°
C12C13C14C1559.8°58.9°
C13C12C11H111122.0°119.9°
C13C12C11H112117.0°120.0°
C13C12H121H122119.1°120.3°
C12C13C14H14160.4°60.8°
C12C13C14H142179.9°178.7°
C13C14C15H141120.1°119.8°
C13C14C15H142120.1°119.8°
C13C14C15H151117.1°120.0°
C13C14C15H152121.8°119.9°
C14C13C12H12160.1°60.9°
C14C13C12H122179.4°178.7°
C13C14H141H142119.5°120.4°
C15C14C13H13178.9°179.9°
C14C15H151H152121.5°120.1°
C15C14H141H142119.6°120.3°
O2C16C17C21178.8°179.7°
O2C16C17C18178.6°179.7°
O2C16C21C20179.3°180.0°
O2C16C17H171.4°0.0°
O2C16C21H210.6°0.0°
C16C17C18H17180.0°179.7°
C16C17C18C190.0°0.5°
C17C16C21C200.4°0.3°
C17C16C21H21179.5°179.7°
C16C17C18H18180.0°179.7°
C21C16C17C180.2°0.5°
C16C21C20C191.1°0.0°
C16C21C20H21180.0°180.0°
C21C16C17H17179.8°179.7°
C16C21C20H20178.9°179.9°
C17C18C19H18180.0°179.8°
C17C18C19C200.7°0.2°
C17C18C19C22177.4°179.8°
C18C19C20C22176.9°180.0°
C18C19C20C211.3°0.0°
C18C19C22O3152.8°180.0°
C18C19C22N232.8°0.0°
C19C18C17H17179.9°179.8°
C18C19C20H20178.8°180.0°
C19C20C21H20180.0°180.0°
C20C19C22O330.3°0.0°
C20C19C22N2144.1°180.0°
C19C20C21H21178.8°180.0°
C20C19C18H18179.3°180.0°
C22C19C20C21178.1°180.0°
C19C22O3N2173.3°179.9°
C19C22N2C23158.8°180.0°
C22C19C18H182.6°0.0°
C22C19C20H201.9°0.0°
C19C22N2HB21.1°0.0°
O3C22N2C2327.3°0.1°
O3C22N2HB152.7°180.0°
C22N2C23HB180.0°180.0°
C22N2C23C2438.0°155.0°
C22N2C23C2788.0°84.4°
C22N2C23H23157.0°35.2°
N2C23C24C27124.3°120.2°
N2C23C24H23119.3°119.8°
N2C23C27H23115.4°119.7°
N2C23C24C25179.4°169.8°
N2C23C27S1168.0°176.2°
N2C23C24H24158.8°49.5°
N2C23C24H24260.1°69.9°
N2C23C27H27147.4°64.0°
N2C23C27H27271.3°56.3°
C24C23C27H23116.4°120.1°
C23C24C25H241120.6°120.3°
C23C24C25H242120.6°120.3°
C23C24C25C2679.7°70.0°
C24C23C27S139.8°63.6°
C24C23N2HB141.9°25.0°
C23C24H241H242118.3°119.4°
C24C23C27H27180.8°56.2°
C24C23C27H272160.5°176.5°
C23C24C25H25140.2°50.2°
C23C24C25H252160.4°169.8°
C27C23C24C2556.3°70.0°
C23C27S1C2642.2°54.3°
C23C27S1O4164.3°168.6°
C23C27S1O562.4°60.1°
C23C27S1H271120.7°119.8°
C23C27S1H272120.6°119.9°
C27C23N2HB92.1°95.5°
C27C23C24H241176.9°169.7°
C27C23C24H24264.2°50.3°
C23C27H271H272118.0°120.2°
C24C25C26H251119.9°120.1°
C24C25C26H252119.9°120.2°
C24C25C26S173.5°63.6°
C25C24C23H2360.1°50.0°
C25C24H241H242118.2°119.4°
C24C25H251H252120.3°119.7°
C24C25C26H261168.2°176.5°
C24C25C26H26244.8°56.2°
C25C26S1H261118.3°119.9°
C25C26S1H262118.3°119.8°
C25C26S1O4169.0°168.6°
C25C26S1O554.9°60.1°
C25C26S1C2755.4°54.3°
C26C25C24H241159.8°169.7°
C26C25C24H24240.9°50.3°
C26C25H251H252120.3°119.8°
C25C26H261H262124.8°120.2°
C26S1O4O5122.0°125.2°
C26S1O4C27117.5°109.5°
C26S1O5C27112.3°109.5°
C26S1C27H27178.4°65.5°
C26S1C27H272162.9°174.2°
S1C26C25H25146.4°56.5°
S1C26C25H252166.7°176.2°
S1C26H261H262124.8°120.2°
O4S1O5C27118.6°125.3°
O4S1C27H27143.6°48.8°
O4S1C27H27275.1°71.5°
O4S1C26H26172.7°71.5°
O4S1C26H26250.7°48.8°
O5S1C27H271176.9°179.9°
O5S1C27H27258.3°59.8°
O5S1C26H26163.4°59.7°
O5S1C26H262173.2°179.9°
S1C27C23H2376.5°56.5°
S1C27H271H272118.0°120.3°
C27S1C26H261173.7°174.2°
C27S1C26H26262.9°65.5°
H1C1C2H20.4°0.4°
H4C4C5H50.3°0.0°
H13C13C12H12161.2°60.5°
H13C13C12H12258.2°59.9°
H13C13C14H14161.0°60.1°
H13C13C14H14258.7°60.3°
H111C11C12H1211.6°0.1°
H111C11C12H122117.7°120.3°
H112C11C12H121122.6°120.1°
H112C11C12H1223.3°0.2°
H151C15C14H141122.7°120.2°
H151C15C14H1423.0°0.2°
H152C15C14H1411.7°0.1°
H152C15C14H142118.0°120.3°
H17C17C18H180.1°0.0°
H21C21C20H201.1°0.0°
HBN2C23H2323.0°144.8°
H23C23C24H24160.5°70.3°
H23C23C24H242179.3°170.3°
H23C23C27H271162.8°176.3°
H23C23C27H27244.1°63.4°
H241C24C25H25180.4°70.1°
H241C24C25H25239.9°49.5°
H242C24C25H251160.8°170.5°
H242C24C25H25279.0°69.9°
H251C25C26H26171.9°63.4°
H251C25C26H262164.7°176.3°
H252C25C26H26148.4°56.3°
H252C25C26H26275.0°64.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon