3VU
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | C8 | doub | 1.21Å | 1.30Å | |
C8 | C7 | sing | 1.51Å | 1.52Å | |
C8 | O1 | sing | 1.34Å | 1.21Å | |
O4 | B | sing | 1.42Å | 1.37Å | |
N1 | S | sing | 1.70Å | 1.65Å | Aromatic |
N1 | C12 | doub | 1.31Å | 1.37Å | Aromatic |
C7 | C6 | sing | 1.53Å | 1.53Å | |
S | C11 | sing | 1.72Å | 1.76Å | Aromatic |
N2 | C12 | sing | 1.39Å | 1.33Å | |
C12 | N | sing | 1.32Å | 1.37Å | Aromatic |
B | O | sing | 1.42Å | 1.39Å | |
B | C | sing | 1.57Å | 1.56Å | |
O | C6 | sing | 1.43Å | 1.44Å | |
C6 | C5 | sing | 1.51Å | 1.52Å | |
C | C5 | doub | 1.40Å | 1.40Å | Aromatic |
C | C1 | sing | 1.39Å | 1.40Å | Aromatic |
C5 | C4 | sing | 1.38Å | 1.41Å | Aromatic |
C11 | N | doub | 1.31Å | 1.33Å | Aromatic |
C11 | O3 | sing | 1.35Å | 1.36Å | |
C1 | C2 | doub | 1.39Å | 1.39Å | Aromatic |
C9 | C4 | sing | 1.51Å | 1.51Å | |
C4 | C3 | doub | 1.38Å | 1.41Å | Aromatic |
C2 | C3 | sing | 1.39Å | 1.40Å | Aromatic |
C2 | O3 | sing | 1.36Å | 1.42Å | |
C3 | C10 | sing | 1.51Å | 1.51Å | |
C1 | H1 | sing | 1.08Å | 1.08Å | |
O4 | H2 | sing | 0.97Å | 0.95Å | |
C7 | H3 | sing | 1.09Å | 1.10Å | |
C7 | H4 | sing | 1.09Å | 1.10Å | |
C9 | H5 | sing | 1.09Å | 1.10Å | |
C9 | H6 | sing | 1.09Å | 1.10Å | |
C9 | H7 | sing | 1.09Å | 1.10Å | |
C10 | H8 | sing | 1.09Å | 1.10Å | |
C10 | H9 | sing | 1.09Å | 1.10Å | |
C10 | H10 | sing | 1.09Å | 1.10Å | |
O1 | H11 | sing | 0.97Å | 0.95Å | |
C6 | H12 | sing | 1.09Å | 1.10Å | |
N2 | H13 | sing | 0.97Å | 1.00Å | |
N2 | H14 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C8 | C7 | 116.5° | 120.0° |
O2 | C8 | O1 | 121.4° | 120.0° |
C7 | C8 | O1 | 122.0° | 120.0° |
C8 | C7 | C6 | 112.5° | 109.5° |
C8 | C7 | H3 | 108.7° | 109.5° |
C8 | C7 | H4 | 108.7° | 109.4° |
C8 | O1 | H11 | 109.5° | 117.0° |
O4 | B | O | 120.6° | 126.5° |
O4 | B | C | 110.8° | 126.5° |
B | O4 | H2 | 109.5° | 114.0° |
S | N1 | C12 | 108.4° | 105.7° |
N1 | S | C11 | 91.5° | 94.7° |
N1 | C12 | N2 | 120.0° | 121.2° |
N1 | C12 | N | 119.4° | 117.7° |
C7 | C6 | O | 110.6° | 110.3° |
C7 | C6 | C5 | 113.6° | 109.5° |
C6 | C7 | H3 | 108.7° | 109.5° |
C6 | C7 | H4 | 108.7° | 109.5° |
C7 | C6 | H12 | 109.2° | 109.5° |
S | C11 | N | 113.2° | 105.1° |
S | C11 | O3 | 125.8° | 127.4° |
N2 | C12 | N | 120.6° | 121.2° |
C12 | N2 | H13 | 109.5° | 120.0° |
C12 | N2 | H14 | 109.5° | 120.0° |
C12 | N | C11 | 107.5° | 116.8° |
O | B | C | 105.5° | 107.1° |
B | O | C6 | 107.5° | 108.8° |
B | C | C5 | 104.1° | 106.9° |
B | C | C1 | 137.9° | 132.9° |
O | C6 | C5 | 103.6° | 109.3° |
O | C6 | H12 | 110.4° | 108.7° |
C6 | C5 | C | 109.4° | 107.9° |
C6 | C5 | C4 | 126.8° | 132.3° |
C5 | C6 | H12 | 109.4° | 109.5° |
C5 | C | C1 | 117.7° | 120.2° |
C | C5 | C4 | 123.4° | 119.8° |
C | C1 | C2 | 119.1° | 119.6° |
C | C1 | H1 | 120.4° | 120.1° |
C5 | C4 | C9 | 121.3° | 120.0° |
C5 | C4 | C3 | 117.9° | 120.1° |
N | C11 | O3 | 121.0° | 127.4° |
C11 | O3 | C2 | 117.1° | 118.0° |
C1 | C2 | C3 | 123.0° | 119.9° |
C1 | C2 | O3 | 118.3° | 120.0° |
C2 | C1 | H1 | 120.4° | 120.2° |
C9 | C4 | C3 | 120.8° | 119.9° |
C4 | C9 | H5 | 109.5° | 109.5° |
C4 | C9 | H6 | 109.5° | 109.5° |
C4 | C9 | H7 | 109.4° | 109.4° |
C4 | C3 | C2 | 118.6° | 120.4° |
C4 | C3 | C10 | 120.5° | 119.8° |
C3 | C2 | O3 | 118.7° | 120.1° |
C2 | C3 | C10 | 120.8° | 119.8° |
C3 | C10 | H8 | 109.5° | 109.4° |
C3 | C10 | H9 | 109.5° | 109.4° |
C3 | C10 | H10 | 109.4° | 109.5° |
H3 | C7 | H4 | 109.5° | 109.4° |
H5 | C9 | H6 | 109.5° | 109.5° |
H5 | C9 | H7 | 109.5° | 109.4° |
H6 | C9 | H7 | 109.5° | 109.5° |
H8 | C10 | H9 | 109.4° | 109.4° |
H8 | C10 | H10 | 109.5° | 109.5° |
H9 | C10 | H10 | 109.5° | 109.5° |
H13 | N2 | H14 | 109.5° | 119.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C8 | C7 | O1 | 177.0° | 179.9° |
O2 | C8 | C7 | C6 | 133.0° | 0.1° |
O2 | C8 | C7 | H3 | 12.5° | 120.0° |
O2 | C8 | C7 | H4 | 106.6° | 120.1° |
O2 | C8 | O1 | H11 | 0.0° | 0.0° |
C8 | C7 | C6 | H3 | 120.5° | 120.1° |
C8 | C7 | C6 | H4 | 120.4° | 120.0° |
C8 | C7 | C6 | O | 52.4° | 65.0° |
C8 | C7 | C6 | C5 | 168.3° | 174.7° |
C8 | C7 | H3 | H4 | 118.6° | 119.9° |
C7 | C8 | O1 | H11 | 176.8° | 179.9° |
C8 | C7 | C6 | H12 | 69.4° | 54.6° |
O1 | C8 | C7 | C6 | 44.1° | 180.0° |
O1 | C8 | C7 | H3 | 164.5° | 59.9° |
O1 | C8 | C7 | H4 | 76.4° | 60.0° |
O4 | B | O | C | 126.2° | 180.0° |
O4 | B | O | C6 | 94.0° | 179.5° |
O4 | B | C | C5 | 110.2° | 180.0° |
O4 | B | C | C1 | 63.2° | 0.0° |
S | N1 | C12 | N2 | 177.1° | 179.9° |
S | N1 | C12 | N | 0.9° | 0.0° |
N1 | S | C11 | N | 0.1° | 0.0° |
N1 | S | C11 | O3 | 179.6° | 179.8° |
C12 | N1 | S | C11 | 0.4° | 0.0° |
N1 | C12 | N2 | N | 178.0° | 179.9° |
N1 | C12 | N | C11 | 1.0° | 0.0° |
N1 | C12 | N2 | H13 | 0.0° | 179.9° |
N1 | C12 | N2 | H14 | 120.0° | 0.0° |
C7 | C6 | O | B | 92.5° | 119.5° |
C7 | C6 | O | C5 | 122.0° | 120.4° |
C7 | C6 | O | H12 | 121.0° | 120.1° |
C7 | C6 | C5 | H12 | 122.2° | 120.1° |
C7 | C6 | C5 | C | 105.1° | 120.0° |
C7 | C6 | C5 | C4 | 68.8° | 60.0° |
C6 | C7 | H3 | H4 | 118.6° | 120.0° |
S | C11 | N | C12 | 0.6° | 0.1° |
S | C11 | N | O3 | 179.5° | 179.8° |
S | C11 | O3 | C2 | 4.4° | 4.9° |
N2 | C12 | N | C11 | 177.0° | 180.0° |
C12 | N2 | H13 | H14 | 120.0° | 180.0° |
C12 | N | C11 | O3 | 179.9° | 179.8° |
N | C12 | N2 | H13 | 178.0° | 0.0° |
N | C12 | N2 | H14 | 58.0° | 180.0° |
B | O | C6 | C5 | 29.5° | 0.9° |
O | B | C | C5 | 21.9° | 0.0° |
O | B | C | C1 | 164.8° | 180.0° |
O | B | O4 | H2 | 0.0° | 0.1° |
B | O | C6 | H12 | 146.5° | 120.4° |
C | B | O | C6 | 32.3° | 0.6° |
B | C | C5 | C6 | 3.6° | 0.5° |
B | C | C5 | C1 | 175.0° | 180.0° |
B | C | C5 | C4 | 170.5° | 179.5° |
B | C | C1 | C2 | 168.3° | 180.0° |
B | C | C1 | H1 | 11.8° | 0.2° |
C | B | O4 | H2 | 123.8° | 180.0° |
O | C6 | C5 | H12 | 117.7° | 119.0° |
O | C6 | C5 | C | 15.0° | 0.9° |
O | C6 | C5 | C4 | 171.2° | 179.1° |
O | C6 | C7 | H3 | 68.1° | 55.0° |
O | C6 | C7 | H4 | 172.8° | 175.0° |
C6 | C5 | C | C4 | 174.1° | 180.0° |
C6 | C5 | C | C1 | 178.6° | 179.5° |
C6 | C5 | C4 | C9 | 3.4° | 0.0° |
C6 | C5 | C4 | C3 | 174.4° | 179.3° |
C5 | C6 | C7 | H3 | 47.9° | 65.3° |
C5 | C6 | C7 | H4 | 71.3° | 54.7° |
C5 | C | C1 | C2 | 4.5° | 0.0° |
C | C5 | C4 | C9 | 176.4° | 180.0° |
C | C5 | C4 | C3 | 1.4° | 0.7° |
C5 | C | C1 | H1 | 175.5° | 179.7° |
C | C5 | C6 | H12 | 132.7° | 119.9° |
C1 | C | C5 | C4 | 4.5° | 0.5° |
C | C1 | C2 | H1 | 180.0° | 179.8° |
C | C1 | C2 | C3 | 1.6° | 0.2° |
C | C1 | C2 | O3 | 179.3° | 179.8° |
C5 | C4 | C9 | C3 | 177.7° | 179.3° |
C5 | C4 | C3 | C2 | 1.6° | 0.4° |
C5 | C4 | C3 | C10 | 176.6° | 179.5° |
C5 | C4 | C9 | H5 | 91.1° | 95.9° |
C5 | C4 | C9 | H6 | 148.9° | 144.1° |
C5 | C4 | C9 | H7 | 28.9° | 24.0° |
C4 | C5 | C6 | H12 | 53.4° | 60.1° |
N | C11 | O3 | C2 | 176.2° | 174.9° |
C11 | O3 | C2 | C1 | 67.3° | 94.6° |
C11 | O3 | C2 | C3 | 113.6° | 85.4° |
C1 | C2 | C3 | C4 | 1.5° | 0.1° |
C1 | C2 | C3 | O3 | 179.0° | 179.9° |
C1 | C2 | C3 | C10 | 176.7° | 180.0° |
C9 | C4 | C3 | C2 | 179.4° | 179.7° |
C9 | C4 | C3 | C10 | 1.2° | 0.2° |
C4 | C9 | H5 | H6 | 120.0° | 120.0° |
C4 | C9 | H5 | H7 | 120.0° | 119.9° |
C4 | C9 | H6 | H7 | 120.0° | 120.0° |
C4 | C3 | C2 | C10 | 178.2° | 180.0° |
C4 | C3 | C2 | O3 | 177.5° | 180.0° |
C3 | C4 | C9 | H5 | 91.1° | 84.8° |
C3 | C4 | C9 | H6 | 28.9° | 35.2° |
C3 | C4 | C9 | H7 | 148.8° | 155.3° |
C4 | C3 | C10 | H8 | 90.9° | 89.9° |
C4 | C3 | C10 | H9 | 149.1° | 30.0° |
C4 | C3 | C10 | H10 | 29.1° | 150.0° |
C3 | C2 | C1 | H1 | 178.3° | 180.0° |
C2 | C3 | C10 | H8 | 90.9° | 90.0° |
C2 | C3 | C10 | H9 | 29.0° | 150.1° |
C2 | C3 | C10 | H10 | 149.1° | 30.0° |
O3 | C2 | C3 | C10 | 4.3° | 0.1° |
O3 | C2 | C1 | H1 | 0.7° | 0.0° |
C3 | C10 | H8 | H9 | 120.0° | 119.9° |
C3 | C10 | H8 | H10 | 120.0° | 120.0° |
C3 | C10 | H9 | H10 | 120.0° | 120.0° |
H3 | C7 | C6 | H12 | 170.2° | 174.6° |
H4 | C7 | C6 | H12 | 51.1° | 65.4° |
H5 | C9 | H6 | H7 | 120.0° | 120.0° |
H8 | C10 | H9 | H10 | 120.0° | 120.1° |