3V8
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C18 | CA | sing | 1.54Å | 1.54Å | |
C18 | C19 | sing | 1.55Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | N | sing | 1.47Å | 1.47Å | |
C | O | doub | 1.21Å | 1.23Å | |
C19 | C20 | sing | 1.55Å | 1.53Å | |
C19 | N5 | sing | 1.46Å | 1.51Å | |
C20 | N | sing | 1.48Å | 1.47Å | |
C11 | C10 | sing | 1.51Å | 1.52Å | |
C11 | C12 | sing | 1.53Å | 1.52Å | |
C12 | C31 | sing | 1.51Å | 1.50Å | |
C10 | O3 | doub | 1.21Å | 1.23Å | |
N5 | C30 | sing | 1.35Å | 1.34Å | Aromatic |
N5 | N9 | sing | 1.29Å | 1.35Å | Aromatic |
C30 | C31 | doub | 1.35Å | 1.37Å | Aromatic |
C31 | N8 | sing | 1.34Å | 1.36Å | Aromatic |
N8 | N9 | doub | 1.29Å | 1.31Å | Aromatic |
C18 | H21 | sing | 1.09Å | 1.10Å | |
C18 | H20 | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C19 | H22 | sing | 1.09Å | 1.10Å | |
C20 | H24 | sing | 1.09Å | 1.10Å | |
C20 | H23 | sing | 1.09Å | 1.10Å | |
C11 | H11 | sing | 1.09Å | 1.10Å | |
C11 | H10 | sing | 1.09Å | 1.10Å | |
C12 | H13 | sing | 1.09Å | 1.10Å | |
C12 | H12 | sing | 1.09Å | 1.10Å | |
C30 | H42 | sing | 1.08Å | 1.08Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N | H | sing | 1.01Å | 1.00Å | |
C10 | O1 | sing | 1.34Å | 1.36Å | |
O1 | H1 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | C18 | C19 | 108.4° | 103.0° |
C18 | CA | C | 111.3° | 109.9° |
C18 | CA | N | 103.3° | 107.2° |
CA | C18 | H21 | 109.7° | 110.7° |
CA | C18 | H20 | 109.7° | 110.7° |
C18 | CA | HA | 110.8° | 109.9° |
C18 | C19 | C20 | 103.5° | 101.6° |
C18 | C19 | N5 | 114.1° | 111.0° |
C19 | C18 | H21 | 109.7° | 110.7° |
C19 | C18 | H20 | 109.8° | 110.7° |
C18 | C19 | H22 | 109.4° | 111.0° |
C | CA | N | 108.3° | 109.9° |
CA | C | O | 120.5° | 120.0° |
C | CA | HA | 111.0° | 109.9° |
CA | C | OXT | 116.7° | 120.0° |
CA | N | C20 | 111.6° | 108.6° |
N | CA | HA | 111.9° | 110.0° |
CA | N | H | 108.9° | 111.0° |
O | C | OXT | 122.8° | 120.0° |
C20 | C19 | N5 | 110.8° | 111.0° |
C19 | C20 | N | 103.9° | 104.8° |
C20 | C19 | H22 | 109.3° | 111.0° |
C19 | C20 | H24 | 110.8° | 110.4° |
C19 | C20 | H23 | 110.8° | 110.4° |
C19 | N5 | C30 | 128.8° | 125.9° |
C19 | N5 | N9 | 120.4° | 125.9° |
N5 | C19 | H22 | 109.5° | 110.9° |
N | C20 | H24 | 110.8° | 110.4° |
N | C20 | H23 | 110.9° | 110.4° |
C20 | N | H | 108.9° | 111.0° |
C10 | C11 | C12 | 112.2° | 109.5° |
C11 | C10 | O3 | 120.6° | 120.0° |
C10 | C11 | H11 | 108.8° | 109.5° |
C10 | C11 | H10 | 108.8° | 109.4° |
C11 | C10 | O1 | 115.4° | 120.0° |
C11 | C12 | C31 | 107.5° | 109.4° |
C12 | C11 | H11 | 108.7° | 109.5° |
C12 | C11 | H10 | 108.8° | 109.4° |
C11 | C12 | H13 | 110.0° | 109.5° |
C11 | C12 | H12 | 110.0° | 109.5° |
C12 | C31 | C30 | 130.9° | 126.7° |
C12 | C31 | N8 | 120.6° | 126.8° |
C31 | C12 | H13 | 110.0° | 109.5° |
C31 | C12 | H12 | 110.0° | 109.5° |
O3 | C10 | O1 | 124.0° | 120.0° |
C30 | N5 | N9 | 110.7° | 108.3° |
N5 | C30 | C31 | 105.1° | 106.2° |
N5 | C30 | H42 | 127.4° | 126.9° |
N5 | N9 | N8 | 106.9° | 110.2° |
C30 | C31 | N8 | 108.0° | 106.5° |
C31 | C30 | H42 | 127.5° | 126.9° |
C31 | N8 | N9 | 109.3° | 108.9° |
H21 | C18 | H20 | 109.5° | 110.8° |
H24 | C20 | H23 | 109.5° | 110.4° |
H11 | C11 | H10 | 109.5° | 109.5° |
H13 | C12 | H12 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
C10 | O1 | H1 | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | C18 | C19 | H21 | 119.8° | 118.4° |
CA | C18 | C19 | H20 | 119.8° | 118.3° |
C18 | CA | C | N | 112.9° | 117.8° |
C18 | CA | C | HA | 123.9° | 121.1° |
C18 | CA | N | HA | 119.2° | 119.5° |
C18 | CA | C | O | 93.8° | 100.0° |
CA | C18 | C19 | C20 | 21.2° | 35.6° |
CA | C18 | C19 | N5 | 141.7° | 153.8° |
C18 | CA | N | C20 | 15.8° | 1.0° |
CA | C18 | H21 | H20 | 120.4° | 123.2° |
CA | C18 | C19 | H22 | 95.2° | 82.4° |
C18 | CA | C | OXT | 87.2° | 80.0° |
C18 | CA | N | H | 104.5° | 121.3° |
C19 | C18 | CA | C | 120.2° | 141.7° |
C19 | C18 | CA | N | 4.2° | 22.3° |
C18 | C19 | C20 | N5 | 122.7° | 118.1° |
C18 | C19 | C20 | H22 | 116.4° | 118.1° |
C18 | C19 | N5 | H22 | 123.0° | 123.9° |
C18 | C19 | C20 | N | 29.7° | 37.1° |
C18 | C19 | N5 | C30 | 70.6° | 85.0° |
C18 | C19 | N5 | N9 | 104.8° | 94.7° |
C19 | C18 | H21 | H20 | 120.5° | 123.2° |
C19 | C18 | CA | HA | 115.7° | 97.3° |
C18 | C19 | C20 | H24 | 89.4° | 81.8° |
C18 | C19 | C20 | H23 | 148.8° | 155.9° |
C | CA | N | HA | 122.6° | 121.1° |
CA | C | O | OXT | 179.0° | 180.0° |
C | CA | N | C20 | 102.4° | 118.4° |
C | CA | C18 | H21 | 0.4° | 23.3° |
C | CA | C18 | H20 | 119.9° | 100.0° |
CA | C | OXT | HXT | 179.0° | 179.9° |
C | CA | N | H | 137.3° | 119.3° |
N | CA | C | O | 19.1° | 17.8° |
CA | N | C20 | C19 | 29.4° | 24.1° |
CA | N | C20 | H | 120.3° | 122.3° |
N | CA | C18 | H21 | 115.6° | 96.1° |
N | CA | C18 | H20 | 124.1° | 140.6° |
CA | N | C20 | H24 | 89.7° | 94.7° |
CA | N | C20 | H23 | 148.4° | 142.9° |
N | CA | C | OXT | 159.9° | 162.2° |
O | C | CA | HA | 142.3° | 138.9° |
O | C | OXT | HXT | 0.0° | 0.0° |
C20 | C19 | N5 | H22 | 120.7° | 123.9° |
C19 | C20 | N | H24 | 119.1° | 118.8° |
C19 | C20 | N | H23 | 119.1° | 118.8° |
C20 | C19 | N5 | C30 | 173.1° | 27.3° |
C20 | C19 | N5 | N9 | 11.5° | 153.0° |
C20 | C19 | C18 | H21 | 98.7° | 82.8° |
C20 | C19 | C18 | H20 | 141.0° | 154.0° |
C19 | C20 | H24 | H23 | 122.6° | 122.3° |
C19 | C20 | N | H | 90.9° | 98.2° |
N5 | C19 | C20 | N | 152.4° | 155.2° |
C19 | N5 | C30 | N9 | 175.8° | 179.7° |
C19 | N5 | C30 | C31 | 173.5° | 180.0° |
C19 | N5 | N9 | N8 | 174.6° | 179.8° |
N5 | C19 | C18 | H21 | 21.8° | 35.4° |
N5 | C19 | C18 | H20 | 98.5° | 87.9° |
N5 | C19 | C20 | H24 | 33.4° | 36.3° |
N5 | C19 | C20 | H23 | 88.5° | 86.0° |
C19 | N5 | C30 | H42 | 6.5° | 0.1° |
C20 | N | CA | HA | 135.0° | 120.5° |
N | C20 | C19 | H22 | 86.7° | 81.0° |
N | C20 | H24 | H23 | 122.6° | 122.3° |
C10 | C11 | C12 | H11 | 120.4° | 120.1° |
C10 | C11 | C12 | H10 | 120.4° | 119.9° |
C10 | C11 | C12 | C31 | 60.0° | 180.0° |
C11 | C10 | O3 | O1 | 179.1° | 180.0° |
C10 | C11 | H11 | H10 | 118.8° | 120.0° |
C10 | C11 | C12 | H13 | 59.7° | 60.1° |
C10 | C11 | C12 | H12 | 179.7° | 60.0° |
C11 | C10 | O1 | H1 | 179.2° | 180.0° |
C11 | C12 | C31 | H13 | 119.7° | 120.0° |
C11 | C12 | C31 | H12 | 119.7° | 120.0° |
C12 | C11 | C10 | O3 | 48.9° | 0.0° |
C11 | C12 | C31 | C30 | 42.7° | 125.0° |
C11 | C12 | C31 | N8 | 128.5° | 55.1° |
C12 | C11 | H11 | H10 | 118.7° | 120.0° |
C11 | C12 | H13 | H12 | 120.9° | 120.1° |
C12 | C11 | C10 | O1 | 130.3° | 180.0° |
C12 | C31 | C30 | N5 | 170.0° | 179.9° |
C12 | C31 | C30 | N8 | 172.1° | 180.0° |
C12 | C31 | N8 | N9 | 171.9° | 179.8° |
C31 | C12 | C11 | H11 | 179.6° | 60.0° |
C31 | C12 | C11 | H10 | 60.4° | 60.1° |
C31 | C12 | H13 | H12 | 120.9° | 120.0° |
C12 | C31 | C30 | H42 | 9.9° | 0.0° |
O3 | C10 | C11 | H11 | 71.5° | 120.1° |
O3 | C10 | C11 | H10 | 169.3° | 120.0° |
O3 | C10 | O1 | H1 | 0.0° | 0.0° |
N5 | C30 | C31 | H42 | 180.0° | 179.9° |
N5 | C30 | C31 | N8 | 2.1° | 0.0° |
C30 | N5 | N9 | N8 | 1.6° | 0.4° |
C30 | N5 | C19 | H22 | 52.4° | 151.1° |
N9 | N5 | C30 | C31 | 2.2° | 0.3° |
N5 | N9 | N8 | C31 | 0.2° | 0.4° |
N9 | N5 | C19 | H22 | 132.2° | 29.2° |
N9 | N5 | C30 | H42 | 177.8° | 179.8° |
C30 | C31 | N8 | N9 | 1.2° | 0.2° |
C30 | C31 | C12 | H13 | 162.4° | 5.0° |
C30 | C31 | C12 | H12 | 77.0° | 115.0° |
N8 | C31 | C12 | H13 | 8.8° | 175.0° |
N8 | C31 | C12 | H12 | 111.8° | 64.9° |
N8 | C31 | C30 | H42 | 178.0° | 180.0° |
H21 | C18 | CA | HA | 124.4° | 144.4° |
H21 | C18 | C19 | H22 | 144.9° | 159.2° |
H20 | C18 | CA | HA | 4.1° | 21.1° |
H20 | C18 | C19 | H22 | 24.6° | 35.9° |
HA | CA | C | OXT | 36.7° | 41.1° |
HA | CA | N | H | 14.7° | 1.8° |
H22 | C19 | C20 | H24 | 154.2° | 160.1° |
H22 | C19 | C20 | H23 | 32.4° | 37.8° |
H24 | C20 | N | H | 150.0° | 143.0° |
H23 | C20 | N | H | 28.2° | 20.7° |
H11 | C11 | C12 | H13 | 60.7° | 60.0° |
H11 | C11 | C12 | H12 | 59.9° | 179.9° |
H11 | C11 | C10 | O1 | 109.3° | 59.9° |
H10 | C11 | C12 | H13 | 179.9° | 180.0° |
H10 | C11 | C12 | H12 | 59.3° | 59.9° |
H10 | C11 | C10 | O1 | 9.9° | 60.0° |