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3R3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3PPdoub1.48Å1.55Å
O2PPsing1.61Å1.51Å
PO5sing1.61Å1.60Å
PO1Psing1.61Å1.53Å
O5C5sing1.43Å1.45Å
C5C4sing1.53Å1.50Å
O3C3sing1.43Å1.46Å
C4C3sing1.55Å1.53Å
C4O4sing1.44Å1.45Å
C3C2sing1.55Å1.53Å
O4C1sing1.43Å1.42Å
O1APAdoub1.48Å1.53Å
C2C1sing1.54Å1.53Å
C2O2sing1.43Å1.44Å
C1O1sing1.43Å1.44Å
O1PAsing1.61Å1.64Å
PAN3Asing1.68Å1.68Å
PAO2Asing1.61Å1.50Å
O3BPBdoub1.48Å1.56Å
N3APBsing1.68Å1.64Å
PBO1Bsing1.61Å1.46Å
PBO2Bsing1.61Å1.49Å
O1BH1Asing0.97Å0.95Å
O2BH2Asing0.97Å0.95Å
N3AH3Asing1.01Å1.00Å
O2AH4Asing0.97Å0.95Å
C1H1sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C2H2sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
O1PH13sing0.97Å0.95Å
O2PH14sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3PPO2P118.7°109.5°
O3PPO5100.4°109.4°
O3PPO1P111.4°109.5°
O2PPO5112.0°109.4°
O2PPO1P107.7°109.5°
PO2PH14109.5°114.0°
O5PO1P105.8°109.5°
PO5C5115.1°123.0°
PO1PH13109.5°114.0°
O5C5C4102.5°109.5°
O5C5H51111.2°109.5°
O5C5H52111.2°109.5°
C5C4C3115.2°110.3°
C5C4O4111.5°110.4°
C5C4H4106.8°110.3°
C4C5H51111.2°109.5°
C4C5H52111.2°109.4°
O3C3C4104.7°111.2°
O3C3C2113.5°111.1°
O3C3H3112.2°111.0°
C3O3HO3109.5°114.1°
C3C4O4109.0°105.2°
C4C3C2103.7°101.0°
C3C4H4106.4°110.3°
C4C3H3111.1°111.1°
C4O4C1107.8°110.0°
O4C4H4107.5°110.3°
C3C2C1103.2°102.2°
C3C2O2112.0°110.8°
C2C3H3111.1°111.0°
C3C2H2110.3°110.9°
O4C1C2107.0°107.7°
O4C1O1106.1°109.8°
O4C1H1112.5°109.8°
O1APAO1106.6°109.5°
O1APAN3A108.1°109.5°
O1APAO2A119.6°109.4°
C1C2O2109.0°110.8°
C2C1O1107.8°109.8°
C2C1H1110.8°109.8°
C1C2H2110.3°111.0°
O2C2H2111.7°110.9°
C2O2HO2109.5°114.0°
C1O1PA125.8°123.0°
O1C1H1112.3°109.8°
O1PAN3A105.7°109.5°
O1PAO2A103.9°109.5°
N3APAO2A111.9°109.5°
PAN3APB131.1°111.1°
PAN3AH3A103.8°111.0°
PAO2AH4A109.5°113.9°
O3BPBN3A107.1°109.4°
O3BPBO1B108.9°109.5°
O3BPBO2B112.7°109.5°
N3APBO1B103.6°109.5°
N3APBO2B106.8°109.5°
PBN3AH3A103.8°111.0°
O1BPBO2B116.9°109.5°
PBO1BH1A109.5°114.0°
PBO2BH2A109.5°114.0°
H51C5H52109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3PPO2PO5116.3°119.9°
O3PPO2PO1P127.8°120.0°
O3PPO5O1P115.9°120.0°
O3PPO5C557.7°55.0°
O3PPO1PH130.0°180.0°
O3PPO2PH140.0°60.1°
O2PPO5O1P117.1°120.1°
O2PPO5C5175.4°175.0°
O2PPO1PH13131.9°60.0°
PO5C5C4159.7°180.0°
PO5C5H5140.8°60.0°
PO5C5H5281.5°60.0°
O5PO1PH13108.2°60.0°
O5PO2PH14116.2°180.0°
O1PPO5C558.2°65.0°
O1PPO2PH14127.8°60.0°
O5C5C4H51118.9°120.0°
O5C5C4H52118.9°120.0°
O5C5C4C3154.1°175.0°
O5C5C4O480.9°69.2°
O5C5C4H436.2°52.9°
O5C5H51H52123.3°120.0°
C5C4C3O3121.9°86.7°
C5C4C3O4126.2°119.0°
C5C4C3H4118.1°122.1°
C5C4O4H4116.8°122.1°
C5C4C3C2118.9°155.4°
C5C4O4C1140.7°143.4°
C5C4C3H30.5°37.5°
C4C5H51H52123.2°119.9°
O3C3C4C2119.2°118.0°
O3C3C4H3121.3°124.2°
O3C3C4O4111.9°154.3°
O3C3C2H3127.6°124.1°
O3C3C2C190.5°152.0°
O3C3C2O226.5°33.9°
O3C3C4H43.8°35.5°
O3C3C2H2151.7°89.7°
C3C4O4H4114.9°118.9°
C4C3C2H3119.4°117.9°
C3C4O4C112.4°24.4°
C4C3C2C122.5°34.0°
C4C3C2O2139.5°84.1°
C4C3O3HO3180.0°180.0°
C4C3C2H295.3°152.3°
C3C4C5H5187.0°55.0°
C3C4C5H5235.3°65.0°
O4C4C3C27.3°36.4°
C4O4C1C227.3°1.7°
C4O4C1O187.5°117.8°
C4O4C1H1149.3°121.3°
O4C4C3H3126.8°81.5°
O4C4C5H5138.0°170.7°
O4C4C5H52160.2°50.8°
C3C2C1O431.2°21.3°
C3C2C1O2119.2°118.1°
C3C2C1H2117.8°118.2°
C3C2O2H2124.4°123.6°
C3C2C1O182.5°140.8°
C3C2C1H1154.2°98.3°
C2C3C4H4123.0°82.5°
C2C3O3HO367.6°68.4°
C3C2O2HO2180.0°180.0°
O4C1C2O1113.7°119.6°
O4C1C2H1123.0°119.6°
O4C1C2O2150.4°96.8°
O4C1O1H1123.3°120.9°
O4C1O1PA76.7°91.6°
C1O4C4H4102.6°94.5°
O4C1C2H286.6°139.5°
O1APAO1C194.7°50.0°
O1APAO1N3A114.8°120.0°
O1APAO1O2A127.3°120.0°
O1APAN3AO2A133.7°120.0°
O1APAN3APB158.5°60.0°
O1APAN3AH3A35.7°176.0°
O1APAO2AH4A0.0°180.0°
C1C2O2H2122.1°123.7°
C2C1O1H1122.3°120.9°
C2C1O1PA169.0°150.2°
C1C2C3H3141.9°83.9°
C1C2O2HO266.5°67.3°
O2C2C1O136.7°22.7°
O2C2C1H186.6°143.6°
O2C2C3H3101.0°158.0°
C1O1PAN3A150.5°70.0°
C1O1PAO2A32.6°170.0°
O1C1C2H2159.7°101.0°
O1PAN3AO2A112.5°120.0°
O1PAN3APB44.6°180.0°
O1PAN3AH3A78.1°56.0°
O1PAO2AH4A118.7°60.0°
PAO1C1H146.6°29.3°
PAN3APBO3B64.9°60.0°
PAN3APBH3A122.8°124.0°
PAN3APBO1B179.9°60.0°
PAN3APBO2B56.2°180.0°
N3APAO2AH4A127.8°60.0°
O2APAN3APB67.8°60.0°
O2APAN3AH3A169.4°64.0°
O3BPBN3AO1B115.0°120.0°
O3BPBN3AO2B121.0°120.0°
O3BPBO1BO2B129.2°120.0°
O3BPBO1BH1A0.0°179.9°
O3BPBO2BH2A0.0°60.0°
O3BPBN3AH3A57.9°64.0°
N3APBO1BO2B117.2°120.0°
N3APBO1BH1A113.7°60.0°
N3APBO2BH2A117.3°180.0°
O1BPBO2BH2A127.3°60.0°
O1BPBN3AH3A57.1°176.0°
O2BPBO1BH1A129.2°60.1°
O2BPBN3AH3A178.9°56.0°
H1C1C2H236.4°19.9°
H4C4C3H3117.6°159.7°
H4C4C5H51155.1°67.2°
H4C4C5H5282.6°172.8°
H3C3O3HO359.4°55.7°
H3C3C2H224.1°34.4°
H2C2O2HO255.6°56.4°

222415

PDB entries from 2024-07-10

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