3R3
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O3P | P | doub | 1.48Å | 1.55Å | |
O2P | P | sing | 1.61Å | 1.51Å | |
P | O5 | sing | 1.61Å | 1.60Å | |
P | O1P | sing | 1.61Å | 1.53Å | |
O5 | C5 | sing | 1.43Å | 1.45Å | |
C5 | C4 | sing | 1.53Å | 1.50Å | |
O3 | C3 | sing | 1.43Å | 1.46Å | |
C4 | C3 | sing | 1.55Å | 1.53Å | |
C4 | O4 | sing | 1.44Å | 1.45Å | |
C3 | C2 | sing | 1.55Å | 1.53Å | |
O4 | C1 | sing | 1.43Å | 1.42Å | |
O1A | PA | doub | 1.48Å | 1.53Å | |
C2 | C1 | sing | 1.54Å | 1.53Å | |
C2 | O2 | sing | 1.43Å | 1.44Å | |
C1 | O1 | sing | 1.43Å | 1.44Å | |
O1 | PA | sing | 1.61Å | 1.64Å | |
PA | N3A | sing | 1.68Å | 1.68Å | |
PA | O2A | sing | 1.61Å | 1.50Å | |
O3B | PB | doub | 1.48Å | 1.56Å | |
N3A | PB | sing | 1.68Å | 1.64Å | |
PB | O1B | sing | 1.61Å | 1.46Å | |
PB | O2B | sing | 1.61Å | 1.49Å | |
O1B | H1A | sing | 0.97Å | 0.95Å | |
O2B | H2A | sing | 0.97Å | 0.95Å | |
N3A | H3A | sing | 1.01Å | 1.00Å | |
O2A | H4A | sing | 0.97Å | 0.95Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C5 | H51 | sing | 1.09Å | 1.10Å | |
C5 | H52 | sing | 1.09Å | 1.10Å | |
O1P | H13 | sing | 0.97Å | 0.95Å | |
O2P | H14 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O3P | P | O2P | 118.7° | 109.5° |
O3P | P | O5 | 100.4° | 109.4° |
O3P | P | O1P | 111.4° | 109.5° |
O2P | P | O5 | 112.0° | 109.4° |
O2P | P | O1P | 107.7° | 109.5° |
P | O2P | H14 | 109.5° | 114.0° |
O5 | P | O1P | 105.8° | 109.5° |
P | O5 | C5 | 115.1° | 123.0° |
P | O1P | H13 | 109.5° | 114.0° |
O5 | C5 | C4 | 102.5° | 109.5° |
O5 | C5 | H51 | 111.2° | 109.5° |
O5 | C5 | H52 | 111.2° | 109.5° |
C5 | C4 | C3 | 115.2° | 110.3° |
C5 | C4 | O4 | 111.5° | 110.4° |
C5 | C4 | H4 | 106.8° | 110.3° |
C4 | C5 | H51 | 111.2° | 109.5° |
C4 | C5 | H52 | 111.2° | 109.4° |
O3 | C3 | C4 | 104.7° | 111.2° |
O3 | C3 | C2 | 113.5° | 111.1° |
O3 | C3 | H3 | 112.2° | 111.0° |
C3 | O3 | HO3 | 109.5° | 114.1° |
C3 | C4 | O4 | 109.0° | 105.2° |
C4 | C3 | C2 | 103.7° | 101.0° |
C3 | C4 | H4 | 106.4° | 110.3° |
C4 | C3 | H3 | 111.1° | 111.1° |
C4 | O4 | C1 | 107.8° | 110.0° |
O4 | C4 | H4 | 107.5° | 110.3° |
C3 | C2 | C1 | 103.2° | 102.2° |
C3 | C2 | O2 | 112.0° | 110.8° |
C2 | C3 | H3 | 111.1° | 111.0° |
C3 | C2 | H2 | 110.3° | 110.9° |
O4 | C1 | C2 | 107.0° | 107.7° |
O4 | C1 | O1 | 106.1° | 109.8° |
O4 | C1 | H1 | 112.5° | 109.8° |
O1A | PA | O1 | 106.6° | 109.5° |
O1A | PA | N3A | 108.1° | 109.5° |
O1A | PA | O2A | 119.6° | 109.4° |
C1 | C2 | O2 | 109.0° | 110.8° |
C2 | C1 | O1 | 107.8° | 109.8° |
C2 | C1 | H1 | 110.8° | 109.8° |
C1 | C2 | H2 | 110.3° | 111.0° |
O2 | C2 | H2 | 111.7° | 110.9° |
C2 | O2 | HO2 | 109.5° | 114.0° |
C1 | O1 | PA | 125.8° | 123.0° |
O1 | C1 | H1 | 112.3° | 109.8° |
O1 | PA | N3A | 105.7° | 109.5° |
O1 | PA | O2A | 103.9° | 109.5° |
N3A | PA | O2A | 111.9° | 109.5° |
PA | N3A | PB | 131.1° | 111.1° |
PA | N3A | H3A | 103.8° | 111.0° |
PA | O2A | H4A | 109.5° | 113.9° |
O3B | PB | N3A | 107.1° | 109.4° |
O3B | PB | O1B | 108.9° | 109.5° |
O3B | PB | O2B | 112.7° | 109.5° |
N3A | PB | O1B | 103.6° | 109.5° |
N3A | PB | O2B | 106.8° | 109.5° |
PB | N3A | H3A | 103.8° | 111.0° |
O1B | PB | O2B | 116.9° | 109.5° |
PB | O1B | H1A | 109.5° | 114.0° |
PB | O2B | H2A | 109.5° | 114.0° |
H51 | C5 | H52 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3P | P | O2P | O5 | 116.3° | 119.9° |
O3P | P | O2P | O1P | 127.8° | 120.0° |
O3P | P | O5 | O1P | 115.9° | 120.0° |
O3P | P | O5 | C5 | 57.7° | 55.0° |
O3P | P | O1P | H13 | 0.0° | 180.0° |
O3P | P | O2P | H14 | 0.0° | 60.1° |
O2P | P | O5 | O1P | 117.1° | 120.1° |
O2P | P | O5 | C5 | 175.4° | 175.0° |
O2P | P | O1P | H13 | 131.9° | 60.0° |
P | O5 | C5 | C4 | 159.7° | 180.0° |
P | O5 | C5 | H51 | 40.8° | 60.0° |
P | O5 | C5 | H52 | 81.5° | 60.0° |
O5 | P | O1P | H13 | 108.2° | 60.0° |
O5 | P | O2P | H14 | 116.2° | 180.0° |
O1P | P | O5 | C5 | 58.2° | 65.0° |
O1P | P | O2P | H14 | 127.8° | 60.0° |
O5 | C5 | C4 | H51 | 118.9° | 120.0° |
O5 | C5 | C4 | H52 | 118.9° | 120.0° |
O5 | C5 | C4 | C3 | 154.1° | 175.0° |
O5 | C5 | C4 | O4 | 80.9° | 69.2° |
O5 | C5 | C4 | H4 | 36.2° | 52.9° |
O5 | C5 | H51 | H52 | 123.3° | 120.0° |
C5 | C4 | C3 | O3 | 121.9° | 86.7° |
C5 | C4 | C3 | O4 | 126.2° | 119.0° |
C5 | C4 | C3 | H4 | 118.1° | 122.1° |
C5 | C4 | O4 | H4 | 116.8° | 122.1° |
C5 | C4 | C3 | C2 | 118.9° | 155.4° |
C5 | C4 | O4 | C1 | 140.7° | 143.4° |
C5 | C4 | C3 | H3 | 0.5° | 37.5° |
C4 | C5 | H51 | H52 | 123.2° | 119.9° |
O3 | C3 | C4 | C2 | 119.2° | 118.0° |
O3 | C3 | C4 | H3 | 121.3° | 124.2° |
O3 | C3 | C4 | O4 | 111.9° | 154.3° |
O3 | C3 | C2 | H3 | 127.6° | 124.1° |
O3 | C3 | C2 | C1 | 90.5° | 152.0° |
O3 | C3 | C2 | O2 | 26.5° | 33.9° |
O3 | C3 | C4 | H4 | 3.8° | 35.5° |
O3 | C3 | C2 | H2 | 151.7° | 89.7° |
C3 | C4 | O4 | H4 | 114.9° | 118.9° |
C4 | C3 | C2 | H3 | 119.4° | 117.9° |
C3 | C4 | O4 | C1 | 12.4° | 24.4° |
C4 | C3 | C2 | C1 | 22.5° | 34.0° |
C4 | C3 | C2 | O2 | 139.5° | 84.1° |
C4 | C3 | O3 | HO3 | 180.0° | 180.0° |
C4 | C3 | C2 | H2 | 95.3° | 152.3° |
C3 | C4 | C5 | H51 | 87.0° | 55.0° |
C3 | C4 | C5 | H52 | 35.3° | 65.0° |
O4 | C4 | C3 | C2 | 7.3° | 36.4° |
C4 | O4 | C1 | C2 | 27.3° | 1.7° |
C4 | O4 | C1 | O1 | 87.5° | 117.8° |
C4 | O4 | C1 | H1 | 149.3° | 121.3° |
O4 | C4 | C3 | H3 | 126.8° | 81.5° |
O4 | C4 | C5 | H51 | 38.0° | 170.7° |
O4 | C4 | C5 | H52 | 160.2° | 50.8° |
C3 | C2 | C1 | O4 | 31.2° | 21.3° |
C3 | C2 | C1 | O2 | 119.2° | 118.1° |
C3 | C2 | C1 | H2 | 117.8° | 118.2° |
C3 | C2 | O2 | H2 | 124.4° | 123.6° |
C3 | C2 | C1 | O1 | 82.5° | 140.8° |
C3 | C2 | C1 | H1 | 154.2° | 98.3° |
C2 | C3 | C4 | H4 | 123.0° | 82.5° |
C2 | C3 | O3 | HO3 | 67.6° | 68.4° |
C3 | C2 | O2 | HO2 | 180.0° | 180.0° |
O4 | C1 | C2 | O1 | 113.7° | 119.6° |
O4 | C1 | C2 | H1 | 123.0° | 119.6° |
O4 | C1 | C2 | O2 | 150.4° | 96.8° |
O4 | C1 | O1 | H1 | 123.3° | 120.9° |
O4 | C1 | O1 | PA | 76.7° | 91.6° |
C1 | O4 | C4 | H4 | 102.6° | 94.5° |
O4 | C1 | C2 | H2 | 86.6° | 139.5° |
O1A | PA | O1 | C1 | 94.7° | 50.0° |
O1A | PA | O1 | N3A | 114.8° | 120.0° |
O1A | PA | O1 | O2A | 127.3° | 120.0° |
O1A | PA | N3A | O2A | 133.7° | 120.0° |
O1A | PA | N3A | PB | 158.5° | 60.0° |
O1A | PA | N3A | H3A | 35.7° | 176.0° |
O1A | PA | O2A | H4A | 0.0° | 180.0° |
C1 | C2 | O2 | H2 | 122.1° | 123.7° |
C2 | C1 | O1 | H1 | 122.3° | 120.9° |
C2 | C1 | O1 | PA | 169.0° | 150.2° |
C1 | C2 | C3 | H3 | 141.9° | 83.9° |
C1 | C2 | O2 | HO2 | 66.5° | 67.3° |
O2 | C2 | C1 | O1 | 36.7° | 22.7° |
O2 | C2 | C1 | H1 | 86.6° | 143.6° |
O2 | C2 | C3 | H3 | 101.0° | 158.0° |
C1 | O1 | PA | N3A | 150.5° | 70.0° |
C1 | O1 | PA | O2A | 32.6° | 170.0° |
O1 | C1 | C2 | H2 | 159.7° | 101.0° |
O1 | PA | N3A | O2A | 112.5° | 120.0° |
O1 | PA | N3A | PB | 44.6° | 180.0° |
O1 | PA | N3A | H3A | 78.1° | 56.0° |
O1 | PA | O2A | H4A | 118.7° | 60.0° |
PA | O1 | C1 | H1 | 46.6° | 29.3° |
PA | N3A | PB | O3B | 64.9° | 60.0° |
PA | N3A | PB | H3A | 122.8° | 124.0° |
PA | N3A | PB | O1B | 179.9° | 60.0° |
PA | N3A | PB | O2B | 56.2° | 180.0° |
N3A | PA | O2A | H4A | 127.8° | 60.0° |
O2A | PA | N3A | PB | 67.8° | 60.0° |
O2A | PA | N3A | H3A | 169.4° | 64.0° |
O3B | PB | N3A | O1B | 115.0° | 120.0° |
O3B | PB | N3A | O2B | 121.0° | 120.0° |
O3B | PB | O1B | O2B | 129.2° | 120.0° |
O3B | PB | O1B | H1A | 0.0° | 179.9° |
O3B | PB | O2B | H2A | 0.0° | 60.0° |
O3B | PB | N3A | H3A | 57.9° | 64.0° |
N3A | PB | O1B | O2B | 117.2° | 120.0° |
N3A | PB | O1B | H1A | 113.7° | 60.0° |
N3A | PB | O2B | H2A | 117.3° | 180.0° |
O1B | PB | O2B | H2A | 127.3° | 60.0° |
O1B | PB | N3A | H3A | 57.1° | 176.0° |
O2B | PB | O1B | H1A | 129.2° | 60.1° |
O2B | PB | N3A | H3A | 178.9° | 56.0° |
H1 | C1 | C2 | H2 | 36.4° | 19.9° |
H4 | C4 | C3 | H3 | 117.6° | 159.7° |
H4 | C4 | C5 | H51 | 155.1° | 67.2° |
H4 | C4 | C5 | H52 | 82.6° | 172.8° |
H3 | C3 | O3 | HO3 | 59.4° | 55.7° |
H3 | C3 | C2 | H2 | 24.1° | 34.4° |
H2 | C2 | O2 | HO2 | 55.6° | 56.4° |