Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3R2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3CC3Csing1.43Å1.43Å
O2C2doub1.22Å1.23Å
C6'C5'sing1.53Å1.51Å
C3CC2Csing1.55Å1.51Å
C3CC4Csing1.54Å1.53Å
C2CC1Csing1.54Å1.52Å
C1CO4Csing1.44Å1.44Å
C1CN1sing1.46Å1.46Å
C2N1sing1.35Å1.37Å
C2N3sing1.35Å1.37Å
C4CO4Csing1.44Å1.43Å
C4CC5Csing1.53Å1.53Å
O4'C4'sing1.43Å1.42Å
N1C6sing1.37Å1.39Å
C5'C4'sing1.53Å1.53Å
C5'C7'sing1.53Å1.53Å
N3C4sing1.35Å1.38Å
C4'C3'sing1.53Å1.52Å
O5CC5Csing1.43Å1.41Å
O5CPAsing1.61Å1.63Å
C7'C1'sing1.53Å1.53Å
O1APAdoub1.48Å1.51Å
C6C5doub1.35Å1.34Å
C4C5sing1.42Å1.49Å
C4O4doub1.22Å1.23Å
PAO3Asing1.61Å1.61Å
PAO2Asing1.61Å1.61Å
O3BC1'sing1.43Å1.43Å
O3BPBsing1.61Å1.63Å
C3'O3'sing1.43Å1.43Å
C3'C2'sing1.53Å1.52Å
C5C5Msing1.51Å1.48Å
C1'C2'sing1.53Å1.53Å
O2BPBdoub1.48Å1.61Å
O3APBsing1.61Å1.61Å
PBO1Bsing1.61Å1.51Å
N3H1sing0.97Å1.00Å
C5MH2sing1.09Å1.10Å
C5MH3sing1.09Å1.10Å
C5MH4sing1.09Å1.10Å
C6H5sing1.08Å1.08Å
C1CH6sing1.09Å1.10Å
C2CH7sing1.09Å1.10Å
C2CH8sing1.09Å1.10Å
C3CH9sing1.09Å1.10Å
O3CH10sing0.97Å0.95Å
C4CH11sing1.09Å1.10Å
C5CH12sing1.09Å1.10Å
C5CH13sing1.09Å1.10Å
O2AH14sing0.97Å0.95Å
O1BH15sing0.97Å0.95Å
C1'H16sing1.09Å1.10Å
C2'H17sing1.09Å1.10Å
C2'H18sing1.09Å1.10Å
C3'H19sing1.09Å1.10Å
O3'H20sing0.97Å0.95Å
C4'H21sing1.09Å1.10Å
O4'H22sing0.97Å0.95Å
C5'H23sing1.09Å1.10Å
C6'H24sing1.09Å1.10Å
C6'H25sing1.09Å1.10Å
C6'H26sing1.09Å1.10Å
C7'H27sing1.09Å1.10Å
C7'H28sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3CC3CC2C107.5°110.5°
O3CC3CC4C106.7°110.6°
O3CC3CH9113.7°110.6°
C3CO3CH10109.5°114.0°
O2C2N1123.9°119.5°
O2C2N3121.2°119.5°
C6'C5'C4'112.6°109.5°
C6'C5'C7'110.6°109.5°
C6'C5'H23107.5°109.5°
C5'C6'H24109.5°109.4°
C5'C6'H25109.5°109.5°
C5'C6'H26109.4°109.4°
C2CC3CC4C103.6°104.1°
C3CC2CC1C102.1°104.0°
C3CC2CH7111.3°110.5°
C3CC2CH8111.3°110.6°
C2CC3CH9112.5°110.5°
C3CC4CO4C105.9°104.8°
C3CC4CC5C110.3°110.4°
C4CC3CH9112.2°110.5°
C3CC4CH11110.6°110.4°
C2CC1CO4C105.3°104.8°
C2CC1CN1110.4°110.4°
C2CC1CH6109.1°110.5°
C1CC2CH7111.3°110.6°
C1CC2CH8111.3°110.5°
O4CC1CN1111.9°110.3°
C1CO4CC4C110.3°105.3°
O4CC1CH6110.2°110.4°
C1CN1C2118.5°119.7°
C1CN1C6119.9°119.7°
N1C1CH6109.8°110.3°
N1C2N3114.9°121.0°
C2N1C6121.5°120.6°
C2N3C4127.7°120.3°
C2N3H1116.2°119.9°
O4CC4CC5C107.4°110.4°
O4CC4CH11112.0°110.4°
C4CC5CO5C107.2°109.5°
C5CC4CH11110.6°110.4°
C4CC5CH12110.0°109.5°
C4CC5CH13110.1°109.4°
O4'C4'C5'110.3°109.5°
O4'C4'C3'107.1°109.5°
O4'C4'H21110.6°109.5°
C4'O4'H22109.5°114.0°
N1C6C5123.9°119.7°
N1C6H5118.1°120.1°
C4'C5'C7'111.3°109.5°
C5'C4'C3'110.4°109.4°
C5'C4'H21109.2°109.5°
C4'C5'H23107.3°109.5°
C5'C7'C1'111.0°109.5°
C7'C5'H23107.3°109.4°
C5'C7'H27109.1°109.4°
C5'C7'H28109.1°109.4°
N3C4C5114.6°119.4°
N3C4O4122.6°120.3°
C4N3H1116.2°119.8°
C4'C3'O3'109.9°109.4°
C4'C3'C2'111.7°109.5°
C4'C3'H19108.1°109.5°
C3'C4'H21109.3°109.5°
C5CO5CPA121.7°123.0°
O5CC5CH12110.0°109.5°
O5CC5CH13110.0°109.5°
O5CPAO1A111.3°109.5°
O5CPAO3A106.7°109.5°
O5CPAO2A108.4°109.5°
C7'C1'O3B105.2°109.5°
C7'C1'C2'110.0°109.5°
C7'C1'H16109.3°109.5°
C1'C7'H27109.1°109.5°
C1'C7'H28109.1°109.5°
O1APAO3A109.6°109.5°
O1APAO2A117.6°109.4°
C6C5C4117.3°119.1°
C6C5C5M122.2°120.4°
C5C6H5118.1°120.2°
C5C4O4122.8°120.3°
C4C5C5M120.5°120.5°
O3APAO2A102.2°109.5°
PAO3APB138.6°134.0°
PAO2AH14109.5°114.0°
C1'O3BPB123.7°123.0°
O3BC1'C2'112.3°109.5°
O3BC1'H16110.7°109.5°
O3BPBO2B105.8°109.4°
O3BPBO3A103.7°109.5°
O3BPBO1B116.7°109.5°
O3'C3'C2'109.6°109.5°
O3'C3'H19109.3°109.4°
C3'O3'H20109.5°114.0°
C3'C2'C1'113.2°109.4°
C3'C2'H17108.5°109.5°
C3'C2'H18108.5°109.5°
C2'C3'H19108.1°109.5°
C5C5MH2109.5°109.4°
C5C5MH3109.4°109.5°
C5C5MH4109.4°109.5°
C2'C1'H16109.3°109.4°
C1'C2'H17108.5°109.5°
C1'C2'H18108.5°109.5°
O2BPBO3A108.1°109.4°
O2BPBO1B114.7°109.5°
O3APBO1B107.1°109.5°
PBO1BH15109.5°114.0°
H2C5MH3109.5°109.5°
H2C5MH4109.5°109.4°
H3C5MH4109.5°109.5°
H7C2CH8109.4°110.5°
H12C5CH13109.5°109.4°
H17C2'H18109.5°109.5°
H24C6'H25109.5°109.5°
H24C6'H26109.5°109.4°
H25C6'H26109.5°109.5°
H27C7'H28109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3CC3CC2CC4C112.7°118.7°
O3CC3CC2CH9125.9°122.7°
O3CC3CC4CH9125.2°122.7°
O3CC3CC2CC1C78.3°118.7°
O3CC3CC4CO4C89.6°142.6°
O3CC3CC4CC5C154.6°98.5°
O3CC3CC2CH7162.9°0.0°
O3CC3CC2CH840.5°122.6°
O3CC3CC4CH1132.0°23.8°
O2C2N1C1C0.8°0.1°
O2C2N1N3178.7°179.8°
O2C2N1C6177.9°179.7°
O2C2N3C4178.8°180.0°
O2C2N3H11.2°0.1°
C6'C5'C4'O4'60.1°60.0°
C6'C5'C4'C7'124.8°120.0°
C6'C5'C4'H23118.1°120.0°
C6'C5'C7'H23116.9°120.0°
C6'C5'C4'C3'178.3°180.0°
C6'C5'C7'C1'176.0°179.9°
C6'C5'C4'H2161.6°60.0°
C5'C6'H24H25120.0°120.0°
C5'C6'H24H26120.0°119.9°
C5'C6'H25H26120.0°120.0°
C6'C5'C7'H2755.8°60.0°
C6'C5'C7'H2863.7°59.9°
C2CC3CC4CH9121.5°118.6°
C3CC2CC1CH7118.8°118.6°
C3CC2CC1CH8118.8°118.7°
C3CC2CC1CO4C33.5°24.0°
C3CC2CC1CN1154.5°142.8°
C2CC3CC4CO4C23.7°24.0°
C2CC3CC4CC5C92.1°142.8°
C3CC2CC1CH684.7°94.9°
C3CC2CH7H8123.5°122.7°
C2CC3CO3CH10180.0°61.4°
C2CC3CC4CH11145.2°94.9°
C4CC3CC2CC1C34.4°0.0°
C3CC4CO4CC1C2.6°40.5°
C3CC4CO4CC5C117.8°118.9°
C3CC4CO4CH11120.6°118.8°
C3CC4CC5CH11122.6°122.3°
C3CC4CC5CO5C82.9°175.0°
C4CC3CC2CH784.4°118.7°
C4CC3CC2CH8153.2°118.7°
C4CC3CO3CH1069.4°176.1°
C3CC4CC5CH1236.7°54.9°
C3CC4CC5CH13157.4°65.0°
C2CC1CO4CN1120.0°118.8°
C2CC1CO4CH6117.5°119.0°
C2CC1CN1H6120.4°122.4°
C2CC1CN1C281.6°61.8°
C2CC1CO4CC4C19.6°40.5°
C2CC1CN1C699.7°117.8°
C1CC2CH7H8123.4°122.7°
C1CC2CC3CH9155.8°118.6°
O4CC1CN1H6122.7°122.2°
O4CC1CN1C2161.5°53.6°
C1CO4CC4CC5C115.2°159.4°
O4CC1CN1C617.3°126.8°
O4CC1CC2CH785.3°142.6°
O4CC1CC2CH8152.4°94.7°
C1CO4CC4CH11123.2°78.3°
C1CN1C2C6178.7°179.6°
C1CN1C2N3179.5°180.0°
N1C1CO4CC4C139.6°159.4°
C1CN1C6C5179.1°179.7°
C1CN1C6H50.9°0.4°
N1C1CC2CH735.7°98.6°
N1C1CC2CH886.7°24.1°
N1C2N3C40.0°0.1°
C2N1C6C50.4°0.7°
N1C2N3H1179.9°180.0°
C2N1C6H5179.6°180.0°
C2N1C1CH638.8°175.8°
N3C2N1C60.8°0.4°
C2N3C4H1180.0°179.9°
C2N3C4C51.2°0.1°
C2N3C4O4177.9°179.8°
O4CC4CC5CH11122.5°122.3°
O4CC4CC5CO5C162.2°69.6°
C4CO4CC1CH697.9°78.4°
O4CC4CC3CH9145.2°94.6°
O4CC4CC5CH1278.2°170.4°
O4CC4CC5CH1342.5°50.4°
C4CC5CO5CH12119.6°120.0°
C4CC5CO5CH13119.7°120.0°
C4CC5CO5CPA152.9°180.0°
C5CC4CC3CH929.4°24.2°
C4CC5CH12H13121.1°119.9°
O4'C4'C5'C3'118.2°120.0°
O4'C4'C5'H21121.7°120.0°
O4'C4'C5'C7'175.1°180.0°
O4'C4'C3'H21119.8°120.0°
O4'C4'C3'O3'63.7°60.0°
O4'C4'C3'C2'174.4°180.0°
O4'C4'C3'H1955.6°60.0°
O4'C4'C5'H2358.0°60.0°
N1C6C5H5180.0°179.4°
N1C6C5C40.8°0.6°
N1C6C5C5M179.6°179.5°
C6N1C1CH6139.9°4.6°
C4'C5'C7'H23117.1°120.0°
C5'C4'C3'H21120.1°120.0°
C4'C5'C7'C1'58.1°60.0°
C5'C4'C3'O3'176.2°180.0°
C5'C4'C3'C2'54.3°60.0°
C5'C4'C3'H1964.6°60.0°
C5'C4'O4'H22180.0°180.0°
C4'C5'C6'H24180.0°60.0°
C4'C5'C6'H2560.0°180.0°
C4'C5'C6'H2660.0°60.0°
C4'C5'C7'H27178.3°60.0°
C4'C5'C7'H2862.2°180.0°
C7'C5'C4'C3'56.9°60.0°
C5'C7'C1'H27120.2°120.0°
C5'C7'C1'H28120.3°120.0°
C5'C7'C1'O3B66.1°60.0°
C5'C7'C1'C2'55.1°60.0°
C5'C7'C1'H16175.0°179.9°
C7'C5'C4'H2163.2°60.0°
C7'C5'C6'H2454.8°60.1°
C7'C5'C6'H25174.8°60.0°
C7'C5'C6'H2665.2°180.0°
C5'C7'H27H28119.3°119.9°
N3C4C5C61.5°0.3°
N3C4C5O4179.1°179.7°
N3C4C5C5M178.9°179.8°
C4'C3'O3'C2'123.2°120.0°
C4'C3'O3'H19118.5°120.0°
C4'C3'C2'H19118.9°120.0°
C4'C3'C2'C1'53.6°60.0°
C4'C3'C2'H1766.9°180.0°
C4'C3'C2'H18174.2°60.0°
C4'C3'O3'H20180.0°179.9°
C3'C4'O4'H2259.8°60.0°
C3'C4'C5'H2360.2°60.0°
C5CO5CPAO1A135.4°55.0°
C5CO5CPAO3A105.0°175.0°
C5CO5CPAO2A4.4°65.0°
O5CC5CC4CH1139.7°52.7°
O5CC5CH12H13121.0°120.0°
O5CPAO1AO3A117.9°120.1°
O5CPAO1AO2A126.0°120.0°
O5CPAO3AO2A113.8°120.0°
O5CPAO3APB2.9°165.0°
PAO5CC5CH1233.2°60.0°
PAO5CC5CH1387.5°60.0°
O5CPAO2AH14127.4°60.0°
C7'C1'O3BC2'119.6°120.0°
C7'C1'O3BH16118.0°120.0°
C7'C1'O3BPB179.5°120.0°
C7'C1'C2'C3'53.4°60.0°
C7'C1'C2'H16120.0°120.0°
C7'C1'C2'H1767.1°180.0°
C7'C1'C2'H18174.0°60.0°
C1'C7'C5'H2359.1°60.0°
C1'C7'H27H28119.3°120.1°
O1APAO3AO2A125.5°120.0°
O1APAO3APB123.6°44.9°
O1APAO2AH140.0°180.0°
C6C5C4C5M179.6°179.9°
C6C5C4O4177.6°180.0°
C6C5C5MH2180.0°180.0°
C6C5C5MH360.0°59.9°
C6C5C5MH460.0°60.1°
C5C4N3H1178.8°180.0°
C4C5C5MH20.4°0.1°
C4C5C5MH3120.4°119.9°
C4C5C5MH4119.6°120.0°
C4C5C6H5179.2°180.0°
O4C4C5C5M2.0°0.1°
O4C4N3H12.1°0.4°
PAO3APBO3B81.4°165.0°
PAO3APBO2B30.5°45.1°
PAO3APBO1B154.6°74.9°
O3APAO2AH14120.1°60.0°
O2APAO3APB110.8°75.1°
O3BC1'C2'C3'63.4°60.0°
O3BC1'C2'H16123.2°120.0°
C1'O3BPBO2B140.1°55.0°
C1'O3BPBO3A106.2°175.0°
C1'O3BPBO1B11.2°65.0°
O3BC1'C2'H17176.1°60.0°
O3BC1'C2'H1857.2°180.0°
O3BC1'C7'H2754.1°180.0°
O3BC1'C7'H28173.7°60.0°
PBO3BC1'C2'60.9°120.0°
O3BPBO2BO3A110.5°120.0°
O3BPBO2BO1B130.1°120.0°
O3BPBO3AO1B124.0°120.1°
O3BPBO1BH15124.5°60.0°
PBO3BC1'H1661.5°0.0°
O3'C3'C2'H19119.1°120.0°
O3'C3'C2'C1'175.7°180.0°
O3'C3'C2'H1755.1°60.0°
O3'C3'C2'H1863.7°60.0°
O3'C3'C4'H2156.1°60.0°
C3'C2'C1'H17120.5°120.0°
C3'C2'C1'H18120.6°120.0°
C3'C2'C1'H16173.4°180.0°
C3'C2'H17H18118.3°120.0°
C2'C3'O3'H2056.9°59.9°
C2'C3'C4'H2165.8°60.0°
C5C5MH2H3120.0°120.1°
C5C5MH2H4120.0°119.9°
C5C5MH3H4119.9°120.0°
C5MC5C6H50.5°0.1°
C1'C2'H17H18118.3°120.0°
C1'C2'C3'H1965.2°60.0°
C2'C1'C7'H27175.3°60.0°
C2'C1'C7'H2865.2°180.0°
O2BPBO3AO1B124.0°120.0°
O2BPBO1BH150.0°180.0°
O3APBO1BH15119.9°60.0°
H2C5MH3H4120.0°120.0°
H6C1CC2CH7156.5°23.7°
H6C1CC2CH834.1°146.4°
H7C2CC3CH936.9°122.7°
H8C2CC3CH985.4°0.1°
H9C3CO3CH1054.8°61.2°
H9C3CC4CH1193.2°146.5°
H11C4CC5CH12159.3°67.4°
H11C4CC5CH1380.0°172.7°
H16C1'C2'H1752.9°60.0°
H16C1'C2'H1866.0°60.0°
H16C1'C7'H2764.7°60.0°
H16C1'C7'H2854.8°60.1°
H17C2'C3'H19174.2°60.0°
H18C2'C3'H1955.3°180.0°
H19C3'O3'H2061.4°60.1°
H19C3'C4'H21175.4°180.0°
H21C4'O4'H2259.2°60.0°
H21C4'C5'H23179.7°180.0°
H23C5'C6'H2462.0°180.0°
H23C5'C6'H2558.0°60.0°
H23C5'C6'H26178.0°60.1°
H23C5'C7'H2761.2°180.0°
H23C5'C7'H28179.3°60.0°
H24C6'H25H26120.0°120.0°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon