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3Q9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CMCC2Csing1.51Å1.51Å
CBCCACsing1.53Å1.48Å
C2CC1Csing1.50Å1.37Å
C2CC3Cdoub1.34Å1.37Å
O_CC1Cdoub1.21Å1.25Å
CACC3Csing1.51Å1.53Å
C1CN_Csing1.35Å1.33Å
C3CC4Csing1.48Å1.38Å
N_CC4Cdoub1.30Å1.34Å
C4CCHDsing1.51Å1.39Å
CMBC2Bsing1.51Å1.54Å
CHDC1Dsing1.51Å1.40Å
CABCBBsing1.53Å1.49Å
CABC3Bsing1.51Å1.37Å
C2BC3Bdoub1.34Å1.35Å
C2BC1Bsing1.48Å1.38Å
C3BC4Bsing1.50Å1.35Å
C1DN_Dsing1.36Å1.37ÅAromatic
C1DC2Ddoub1.35Å1.37ÅAromatic
CHBC1Bsing1.51Å1.36Å
CHBC4Asing1.51Å1.38Å
C1BN_Bdoub1.30Å1.34Å
N_DC4Dsing1.36Å1.38ÅAromatic
CMDC2Dsing1.51Å1.53Å
C2DC3Dsing1.41Å1.36ÅAromatic
N_AC4Asing1.36Å1.36ÅAromatic
N_AC1Asing1.36Å1.36ÅAromatic
C4BN_Bsing1.34Å1.34Å
C4BO_Bdoub1.21Å1.24Å
C4AC3Adoub1.35Å1.38ÅAromatic
C4DC3Ddoub1.35Å1.38ÅAromatic
C4DCHAsing1.51Å1.42Å
C3DCADsing1.51Å1.39Å
C1ACHAsing1.51Å1.42Å
C1AC2Adoub1.35Å1.39ÅAromatic
C3AC2Asing1.41Å1.37ÅAromatic
C3ACMAsing1.51Å1.52Å
CADCBDsing1.53Å1.54Å
C2ACAAsing1.51Å1.56Å
CBDCGDsing1.51Å1.57Å
CAACBAsing1.53Å1.52Å
CGDO2Ddoub1.21Å1.25Å
CGDO1Dsing1.34Å1.23Å
CBACGAsing1.51Å1.54Å
O2ACGAdoub1.21Å1.24Å
CGAO1Asing1.34Å1.25Å
CBCH1sing1.09Å1.10Å
CBCH2sing1.09Å1.10Å
CBCH3sing1.09Å1.10Å
CACH4sing1.09Å1.10Å
CACH5sing1.09Å1.10Å
CMCH6sing1.09Å1.10Å
CMCH7sing1.09Å1.10Å
CMCH8sing1.09Å1.10Å
CHDH9sing1.09Å1.10Å
CHDH10sing1.09Å1.10Å
N_DH11sing0.97Å1.00Å
CMDH12sing1.09Å1.10Å
CMDH13sing1.09Å1.10Å
CMDH14sing1.09Å1.10Å
CADH15sing1.09Å1.10Å
CADH16sing1.09Å1.10Å
CBDH17sing1.09Å1.10Å
CBDH18sing1.09Å1.10Å
O1DH19sing0.97Å0.95Å
CHAH20sing1.09Å1.10Å
CHAH21sing1.09Å1.10Å
N_AH22sing0.97Å1.00Å
CAAH23sing1.09Å1.10Å
CAAH24sing1.09Å1.10Å
CBAH25sing1.09Å1.10Å
CBAH26sing1.09Å1.10Å
O1AH27sing0.97Å0.95Å
CMAH28sing1.09Å1.10Å
CMAH29sing1.09Å1.10Å
CMAH30sing1.09Å1.10Å
CHBH31sing1.09Å1.10Å
CHBH32sing1.09Å1.10Å
CMBH33sing1.09Å1.10Å
CMBH34sing1.09Å1.10Å
CMBH35sing1.09Å1.10Å
CABH36sing1.09Å1.10Å
CABH37sing1.09Å1.10Å
CBBH38sing1.09Å1.10Å
CBBH39sing1.09Å1.10Å
CBBH40sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CMCC2CC1C124.6°127.0°
CMCC2CC3C128.6°127.1°
C2CCMCH6109.5°109.4°
C2CCMCH7109.4°109.4°
C2CCMCH8109.5°109.4°
CBCCACC3C116.3°109.5°
CACCBCH1109.5°109.5°
CACCBCH2109.5°109.5°
CACCBCH3109.5°109.5°
CBCCACH4107.7°109.5°
CBCCACH5107.7°109.5°
C1CC2CC3C106.5°105.8°
C2CC1CO_C124.7°126.1°
C2CC1CN_C110.7°107.8°
C2CC3CCAC130.3°126.7°
C2CC3CC4C106.3°106.7°
O_CC1CN_C124.5°126.1°
CACC3CC4C123.5°126.6°
C3CCACH4107.8°109.5°
C3CCACH5107.7°109.5°
C1CN_CC4C106.7°110.4°
C3CC4CN_C109.8°109.3°
C3CC4CCHD121.9°125.3°
N_CC4CCHD128.3°125.3°
C4CCHDC1D131.0°109.4°
C4CCHDH9103.9°109.5°
C4CCHDH10103.9°109.4°
CMBC2BC3B123.2°126.7°
CMBC2BC1B128.3°126.6°
C2BCMBH33109.5°109.5°
C2BCMBH34109.5°109.5°
C2BCMBH35109.5°109.4°
CHDC1DN_D132.6°125.9°
CHDC1DC2D122.6°125.9°
C1DCHDH9103.9°109.5°
C1DCHDH10103.8°109.5°
CBBCABC3B124.5°109.4°
CBBCABH36105.6°109.5°
CBBCABH37105.6°109.5°
CABCBBH38109.5°109.5°
CABCBBH39109.4°109.5°
CABCBBH40109.4°109.4°
CABC3BC2B124.0°127.1°
CABC3BC4B131.5°127.1°
C3BCABH36105.6°109.5°
C3BCABH37105.6°109.5°
C3BC2BC1B108.4°106.6°
C2BC3BC4B104.5°105.9°
C2BC1BCHB124.9°125.3°
C2BC1BN_B109.3°109.4°
C3BC4BN_B113.2°107.8°
C3BC4BO_B124.9°126.1°
N_DC1DC2D104.8°108.2°
C1DN_DC4D111.3°108.8°
C1DN_DH11124.3°125.6°
C1DC2DCMD125.5°126.3°
C1DC2DC3D110.2°107.4°
C1BCHBC4A128.6°109.5°
CHBC1BN_B125.7°125.3°
C1BCHBH31104.5°109.5°
C1BCHBH32104.5°109.5°
CHBC4AN_A121.3°125.9°
CHBC4AC3A130.2°125.9°
C4ACHBH31104.5°109.5°
C4ACHBH32104.5°109.5°
C1BN_BC4B104.6°110.4°
N_DC4DC3D105.4°108.2°
N_DC4DCHA129.8°125.9°
C4DN_DH11124.3°125.7°
CMDC2DC3D124.3°126.3°
C2DCMDH12109.5°109.5°
C2DCMDH13109.5°109.5°
C2DCMDH14109.5°109.5°
C2DC3DC4D108.3°107.4°
C2DC3DCAD124.1°126.3°
C4AN_AC1A109.3°108.8°
N_AC4AC3A108.5°108.2°
C4AN_AH22125.4°125.6°
N_AC1ACHA128.9°125.9°
N_AC1AC2A106.8°108.2°
C1AN_AH22125.3°125.6°
N_BC4BO_B121.9°126.1°
C4AC3AC2A106.9°107.4°
C4AC3ACMA127.9°126.3°
C3DC4DCHA124.9°125.9°
C4DC3DCAD127.5°126.3°
C4DCHAC1A130.6°109.5°
C4DCHAH20104.0°109.5°
C4DCHAH21103.9°109.5°
C3DCADCBD118.8°109.5°
C3DCADH15107.1°109.5°
C3DCADH16107.1°109.4°
CHAC1AC2A124.3°125.9°
C1ACHAH20104.0°109.5°
C1ACHAH21104.0°109.5°
C1AC2AC3A108.6°107.4°
C1AC2ACAA124.2°126.3°
C2AC3ACMA125.1°126.3°
C3AC2ACAA127.0°126.3°
C3ACMAH28109.5°109.5°
C3ACMAH29109.5°109.5°
C3ACMAH30109.4°109.5°
CADCBDCGD113.2°109.4°
CBDCADH15107.1°109.5°
CBDCADH16107.1°109.5°
CADCBDH17108.5°109.5°
CADCBDH18108.5°109.5°
C2ACAACBA117.0°109.5°
C2ACAAH23107.6°109.5°
C2ACAAH24107.6°109.5°
CBDCGDO2D120.2°120.0°
CBDCGDO1D117.3°120.0°
CGDCBDH17108.5°109.5°
CGDCBDH18108.5°109.5°
CAACBACGA114.9°109.5°
CBACAAH23107.6°109.4°
CBACAAH24107.5°109.5°
CAACBAH25108.1°109.4°
CAACBAH26108.1°109.5°
O2DCGDO1D122.5°120.0°
CGDO1DH19109.5°117.0°
CBACGAO2A116.1°120.0°
CBACGAO1A118.5°120.0°
CGACBAH25108.1°109.5°
CGACBAH26108.1°109.5°
O2ACGAO1A125.1°120.0°
CGAO1AH27109.5°117.0°
H1CBCH2109.5°109.5°
H1CBCH3109.5°109.5°
H2CBCH3109.5°109.4°
H4CACH5109.5°109.5°
H6CMCH7109.5°109.5°
H6CMCH8109.4°109.5°
H7CMCH8109.5°109.5°
H9CHDH10109.5°109.5°
H12CMDH13109.5°109.5°
H12CMDH14109.5°109.5°
H13CMDH14109.4°109.5°
H15CADH16109.4°109.4°
H17CBDH18109.5°109.5°
H20CHAH21109.5°109.4°
H23CAAH24109.5°109.5°
H25CBAH26109.5°109.5°
H28CMAH29109.4°109.5°
H28CMAH30109.5°109.4°
H29CMAH30109.5°109.5°
H31CHBH32109.5°109.4°
H33CMBH34109.5°109.5°
H33CMBH35109.5°109.5°
H34CMBH35109.4°109.5°
H36CABH37109.5°109.5°
H38CBBH39109.4°109.5°
H38CBBH40109.5°109.5°
H39CBBH40109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CMCC2CC1CC3C174.2°180.0°
CMCC2CC1CO_C6.0°0.0°
CMCC2CC3CCAC4.6°0.0°
CMCC2CC1CN_C176.7°180.0°
CMCC2CC3CC4C176.1°179.7°
C2CCMCH6H7120.0°120.0°
C2CCMCH6H8120.0°120.0°
C2CCMCH7H8120.0°119.9°
CBCCACC3CC2C8.7°95.3°
CBCCACC3CH4121.0°120.0°
CBCCACC3CH5121.0°120.0°
CBCCACC3CC4C170.5°85.1°
CACCBCH1H2120.0°120.0°
CACCBCH1H3120.0°120.0°
CACCBCH2H3120.0°120.0°
CBCCACH4H5116.9°120.0°
C2CC1CO_CN_C176.9°180.0°
C1CC2CC3CCAC178.5°179.9°
C1CC2CC3CC4C2.2°0.3°
C2CC1CN_CC4C1.7°0.3°
C1CC2CCMCH6180.0°0.0°
C1CC2CCMCH760.0°120.1°
C1CC2CCMCH860.0°120.0°
C3CC2CC1CO_C179.8°180.0°
C2CC3CCACC4C179.2°179.6°
C3CC2CC1CN_C2.5°0.0°
C2CC3CC4CN_C1.2°0.5°
C2CC3CC4CCHD177.7°179.8°
C2CC3CCACH4129.7°24.6°
C2CC3CCACH5112.3°144.7°
C3CC2CCMCH67.1°180.0°
C3CC2CCMCH7127.1°60.0°
C3CC2CCMCH8112.9°60.0°
O_CC1CN_CC4C179.0°179.7°
CACC3CC4CN_C179.4°179.8°
CACC3CC4CCHD1.7°0.1°
C3CCACCBCH1180.0°60.0°
C3CCACCBCH260.0°180.0°
C3CCACCBCH360.0°60.0°
C3CCACH4H5116.9°120.0°
C1CN_CC4CC3C0.2°0.5°
C1CN_CC4CCHD179.1°179.7°
C3CC4CN_CCHD178.8°179.7°
C3CC4CCHDC1D177.8°180.0°
C4CC3CCACH449.6°155.0°
C4CC3CCACH568.5°34.9°
C3CC4CCHDH959.5°60.0°
C3CC4CCHDH1055.0°60.0°
N_CC4CCHDC1D3.5°0.3°
N_CC4CCHDH9119.2°120.3°
N_CC4CCHDH10126.3°119.7°
C4CCHDC1DH9122.7°120.0°
C4CCHDC1DH10122.7°120.0°
C4CCHDC1DN_D10.6°95.0°
C4CCHDC1DC2D171.0°84.7°
C4CCHDH9H10110.4°120.0°
CMBC2BC3BCAB0.4°0.0°
CMBC2BC3BC1B177.8°180.0°
CMBC2BC3BC4B179.9°179.8°
CMBC2BC1BCHB4.0°0.0°
CMBC2BC1BN_B180.0°179.8°
C2BCMBH33H34120.0°120.0°
C2BCMBH33H35120.0°119.9°
C2BCMBH34H35120.0°119.9°
CHDC1DN_DC2D178.6°179.8°
CHDC1DN_DC4D178.7°180.0°
CHDC1DC2DCMD0.8°0.0°
CHDC1DC2DC3D178.7°180.0°
C1DCHDH9H10110.4°120.0°
CHDC1DN_DH111.4°0.0°
CBBCABC3BH36122.0°120.0°
CBBCABC3BH37122.0°120.0°
CBBCABC3BC2B174.3°95.1°
CBBCABC3BC4B5.3°84.8°
CBBCABH36H37113.2°120.0°
CABCBBH38H39120.0°120.0°
CABCBBH38H40120.0°119.9°
CABCBBH39H40120.0°120.0°
CABC3BC2BC4B179.7°179.9°
CABC3BC2BC1B178.3°180.0°
CABC3BC4BN_B179.2°179.9°
CABC3BC4BO_B0.1°0.0°
C3BCABH36H37113.3°120.0°
C3BCABCBBH38180.0°60.0°
C3BCABCBBH3960.0°60.0°
C3BCABCBBH4060.0°180.0°
C3BC2BC1BCHB178.3°180.0°
C3BC2BC1BN_B2.3°0.2°
C2BC3BC4BN_B1.2°0.0°
C2BC3BC4BO_B179.6°179.8°
C3BC2BCMBH33180.0°90.0°
C3BC2BCMBH3460.0°150.0°
C3BC2BCMBH3560.0°30.0°
C2BC3BCABH3663.7°145.0°
C2BC3BCABH3752.3°25.0°
C1BC2BC3BC4B2.1°0.1°
C2BC1BCHBN_B175.3°179.7°
C2BC1BCHBC4A151.5°179.7°
C2BC1BN_BC4B1.5°0.2°
C2BC1BCHBH3129.0°60.3°
C2BC1BCHBH3285.9°59.7°
C1BC2BCMBH332.6°90.0°
C1BC2BCMBH34117.4°30.0°
C1BC2BCMBH35122.6°150.0°
C3BC4BN_BC1B0.2°0.1°
C3BC4BN_BO_B179.3°179.9°
C4BC3BCABH36116.7°35.2°
C4BC3BCABH37127.3°155.2°
C1DN_DC4DH11180.0°180.0°
N_DC1DC2DCMD179.5°179.8°
N_DC1DC2DC3D0.1°0.3°
C1DN_DC4DC3D0.2°0.1°
C1DN_DC4DCHA177.8°179.9°
N_DC1DCHDH9112.1°145.0°
N_DC1DCHDH10133.4°25.0°
C2DC1DN_DC4D0.1°0.2°
C1DC2DCMDC3D179.4°179.9°
C1DC2DC3DC4D0.2°0.2°
C1DC2DC3DCAD178.0°179.9°
C2DC1DCHDH966.3°35.3°
C2DC1DCHDH1048.3°155.3°
C2DC1DN_DH11179.9°179.7°
C1DC2DCMDH1290.3°89.9°
C1DC2DCMDH13149.7°150.0°
C1DC2DCMDH1429.7°30.1°
C1BCHBC4AH31122.5°120.0°
C1BCHBC4AH32122.5°120.1°
C1BCHBC4AN_A156.5°95.0°
CHBC1BN_BC4B177.5°180.0°
C1BCHBC4AC3A24.5°85.2°
C1BCHBH31H32111.4°120.0°
C4ACHBC1BN_B33.2°0.0°
CHBC4AN_AC3A179.2°179.8°
CHBC4AN_AC1A178.2°180.0°
CHBC4AC3AC2A178.6°179.8°
CHBC4AC3ACMA2.5°0.0°
CHBC4AN_AH221.8°0.0°
C4ACHBH31H32111.5°120.0°
C1BN_BC4BO_B179.0°180.0°
N_BC1BCHBH31155.7°120.0°
N_BC1BCHBH3289.4°120.0°
N_DC4DC3DC2D0.3°0.0°
N_DC4DC3DCHA178.1°179.9°
N_DC4DC3DCAD177.9°179.9°
N_DC4DCHAC1A9.1°94.9°
N_DC4DCHAH20131.8°25.1°
N_DC4DCHAH21113.6°145.1°
CMDC2DC3DC4D179.7°179.9°
CMDC2DC3DCAD2.6°0.0°
C2DCMDH12H13120.0°120.0°
C2DCMDH12H14120.0°120.0°
C2DCMDH13H14120.0°120.0°
C2DC3DC4DCAD177.7°179.9°
C2DC3DC4DCHA177.9°179.9°
C2DC3DCADCBD112.2°89.9°
C3DC2DCMDH1290.3°90.0°
C3DC2DCMDH1329.7°30.0°
C3DC2DCMDH14149.7°150.0°
C2DC3DCADH15126.4°150.0°
C2DC3DCADH169.1°30.1°
C4AN_AC1AH22180.0°180.0°
C4AN_AC1ACHA179.6°180.0°
C4AN_AC1AC2A1.0°0.3°
N_AC4AC3AC2A0.5°0.0°
N_AC4AC3ACMA176.6°179.8°
N_AC4ACHBH3181.0°25.0°
N_AC4ACHBH3234.0°145.0°
C1AN_AC4AC3A1.0°0.2°
N_AC1ACHAC4D1.4°94.7°
N_AC1ACHAC2A179.2°179.7°
N_AC1AC2AC3A0.7°0.3°
N_AC1AC2ACAA176.9°179.8°
N_AC1ACHAH20121.4°145.3°
N_AC1ACHAH21124.1°25.3°
C4AC3AC2AC1A0.1°0.2°
C4AC3AC2ACMA176.2°179.8°
C4AC3AC2ACAA176.2°179.9°
C3AC4AN_AH22179.0°179.8°
C4AC3ACMAH2887.6°90.2°
C4AC3ACMAH29152.4°29.8°
C4AC3ACMAH3032.4°149.8°
C3AC4ACHBH3198.0°154.8°
C3AC4ACHBH32147.0°34.8°
C3DC4DCHAC1A173.2°85.2°
C4DC3DCADCBD65.1°90.2°
C3DC4DN_DH11179.8°179.9°
C4DC3DCADH1556.3°29.8°
C4DC3DCADH16173.6°149.8°
C3DC4DCHAH2050.5°154.8°
C3DC4DCHAH2164.0°34.9°
CHAC4DC3DCAD0.2°0.0°
C4DCHAC1AH20122.7°120.0°
C4DCHAC1AH21122.7°120.0°
C4DCHAC1AC2A177.9°85.0°
CHAC4DN_DH112.2°0.1°
C4DCHAH20H21110.6°120.0°
C3DCADCBDH15121.4°120.1°
C3DCADCBDH16121.3°120.0°
C3DCADCBDCGD172.0°180.0°
C3DCADH15H16115.7°119.9°
C3DCADCBDH1751.4°60.0°
C3DCADCBDH1867.5°60.1°
CHAC1AC2AC3A179.9°180.0°
CHAC1AC2ACAA3.7°0.0°
C1ACHAH20H21110.6°120.0°
CHAC1AN_AH220.4°0.0°
C1AC2AC3ACAA176.0°180.0°
C1AC2AC3ACMA176.1°180.0°
C1AC2ACAACBA96.4°90.0°
C2AC1ACHAH2059.4°35.0°
C2AC1ACHAH2155.2°155.0°
C2AC1AN_AH22179.0°179.7°
C1AC2ACAAH23142.5°150.0°
C1AC2ACAAH2424.7°30.0°
C3AC2ACAACBA88.1°89.9°
C3AC2ACAAH2333.0°30.0°
C3AC2ACAAH24150.8°150.1°
C2AC3ACMAH2887.8°90.0°
C2AC3ACMAH2932.2°150.0°
C2AC3ACMAH30152.2°30.0°
CMAC3AC2ACAA0.1°0.0°
C3ACMAH28H29120.0°120.1°
C3ACMAH28H30120.0°120.0°
C3ACMAH29H30120.0°120.0°
CADCBDCGDH17120.5°120.0°
CADCBDCGDH18120.5°119.9°
CADCBDCGDO2D97.3°0.0°
CADCBDCGDO1D84.1°180.0°
CBDCADH15H16115.8°120.0°
CADCBDH17H18118.3°120.0°
C2ACAACBAH23121.1°120.0°
C2ACAACBAH24121.1°120.0°
C2ACAACBACGA68.8°180.0°
C2ACAAH23H24116.6°120.0°
C2ACAACBAH25170.4°60.0°
C2ACAACBAH2652.0°59.9°
CBDCGDO2DO1D178.5°179.9°
CGDCBDCADH1566.7°60.0°
CGDCBDCADH1650.6°60.0°
CGDCBDH17H18118.3°120.0°
CBDCGDO1DH19178.5°180.0°
CAACBACGAH25120.8°120.0°
CAACBACGAH26120.8°120.1°
CAACBACGAO2A115.3°0.0°
CAACBACGAO1A70.5°180.0°
CBACAAH23H24116.6°120.0°
CAACBAH25H26117.6°120.0°
O2DCGDCBDH1723.3°119.9°
O2DCGDCBDH18142.2°120.0°
O2DCGDO1DH190.0°0.0°
O1DCGDCBDH17155.3°60.0°
O1DCGDCBDH1836.4°60.1°
CBACGAO2AO1A173.7°180.0°
CGACBACAAH2352.3°60.0°
CGACBACAAH24170.1°60.0°
CGACBAH25H26117.5°120.0°
CBACGAO1AH27173.6°180.0°
O2ACGACBAH25123.8°120.0°
O2ACGACBAH265.4°120.0°
O2ACGAO1AH270.0°0.1°
O1ACGACBAH2550.3°60.0°
O1ACGACBAH26168.7°60.0°
H1CBCH2H3120.0°120.0°
H1CBCCACH459.0°180.0°
H1CBCCACH559.0°60.0°
H2CBCCACH461.0°60.0°
H2CBCCACH5179.0°60.0°
H3CBCCACH4179.0°60.0°
H3CBCCACH561.0°180.0°
H6CMCH7H8120.0°120.1°
H12CMDH13H14120.0°120.0°
H15CADCBDH17172.7°179.9°
H15CADCBDH1853.9°60.0°
H16CADCBDH1769.9°59.9°
H16CADCBDH18171.2°180.0°
H23CAACBAH2568.5°180.0°
H23CAACBAH26173.0°60.0°
H24CAACBAH2549.3°60.0°
H24CAACBAH2669.1°180.0°
H28CMAH29H30120.0°119.9°
H33CMBH34H35120.0°120.1°
H36CABCBBH3857.9°NaN°
H36CABCBBH3962.0°60.0°
H36CABCBBH40178.0°60.0°
H37CABCBBH3858.0°60.0°
H37CABCBBH39178.0°180.0°
H37CABCBBH4062.0°60.0°
H38CBBH39H40120.0°120.0°

223532

PDB entries from 2024-08-07

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