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3OM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.31Å1.44Å
O1C3sing1.43Å1.50Å
C2C3sing1.51Å1.48Å
C3C4sing1.53Å1.51Å
C4C5sing1.53Å1.50Å
C5C6sing1.53Å1.51Å
C6C7sing1.53Å1.50Å
C7C8sing1.53Å1.47Å
C1H1sing1.08Å1.08Å
C1H1Asing1.08Å1.08Å
O1HO1sing0.97Å0.95Å
C2H2sing1.08Å1.08Å
C3H3sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C8H8Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3121.6°120.0°
C2C1H1120.0°120.0°
C2C1H1A120.0°120.0°
C1C2H2119.2°120.0°
O1C3C2108.7°109.5°
O1C3C4110.1°109.5°
C3O1HO1109.5°114.0°
O1C3H3108.3°109.5°
C2C3C4112.9°109.5°
C3C2H2119.2°120.0°
C2C3H3108.6°109.4°
C3C4C5114.3°109.5°
C4C3H3108.2°109.5°
C3C4H4108.2°109.5°
C3C4H4A108.2°109.5°
C4C5C6110.0°109.5°
C5C4H4108.3°109.4°
C5C4H4A108.3°109.5°
C4C5H5109.4°109.5°
C4C5H5A109.4°109.5°
C5C6C7112.5°109.5°
C6C5H5109.3°109.5°
C6C5H5A109.3°109.5°
C5C6H6108.7°109.5°
C5C6H6A108.7°109.5°
C6C7C8111.9°109.5°
C7C6H6108.7°109.5°
C7C6H6A108.7°109.4°
C6C7H7108.9°109.5°
C6C7H7A108.9°109.5°
C8C7H7108.8°109.5°
C8C7H7A108.8°109.5°
C7C8H8109.5°109.5°
C7C8H8A109.4°109.5°
C7C8H8B109.5°109.5°
H1C1H1A120.0°120.0°
H4C4H4A109.4°109.5°
H5C5H5A109.5°109.4°
H6C6H6A109.5°109.5°
H7C7H7A109.5°109.5°
H8C8H8A109.5°109.5°
H8C8H8B109.4°109.5°
H8AC8H8B109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3O1180.0°5.0°
C1C2C3H2180.0°180.0°
C1C2C3C457.6°125.0°
C2C1H1H1A179.9°179.7°
C1C2C3H362.3°115.0°
O1C3C2C4122.4°120.0°
O1C3C2H3117.6°120.0°
O1C3C4H3118.2°120.0°
O1C3C4C551.1°65.0°
O1C3C2H20.0°175.0°
O1C3C4H469.6°55.0°
O1C3C4H4A171.9°175.0°
C2C3C4H3120.2°119.9°
C2C3C4C5172.7°175.0°
C3C2C1H10.0°180.0°
C3C2C1H1A180.0°0.3°
C2C3O1HO1180.0°60.0°
C2C3C4H452.0°65.0°
C2C3C4H4A66.5°55.0°
C3C4C5H4120.7°120.0°
C3C4C5H4A120.7°120.0°
C3C4C5C6179.8°180.0°
C4C3O1HO155.9°60.0°
C4C3C2H2122.4°55.0°
C3C4H4H4A117.8°120.0°
C3C4C5H560.1°60.0°
C3C4C5H5A59.7°59.9°
C4C5C6H5120.1°120.0°
C4C5C6H5A120.1°120.1°
C4C5C6C7179.6°179.9°
C5C4C3H367.1°55.1°
C5C4H4H4A117.8°120.0°
C4C5H5H5A119.8°120.0°
C4C5C6H659.1°60.0°
C4C5C6H6A59.9°60.0°
C5C6C7H6120.4°120.0°
C5C6C7H6A120.5°120.0°
C5C6C7C8179.9°180.0°
C6C5C4H459.1°60.0°
C6C5C4H4A59.5°60.0°
C6C5H5H5A119.7°120.0°
C5C6H6H6A118.6°120.0°
C5C6C7H759.7°60.0°
C5C6C7H7A59.6°60.0°
C6C7C8H7120.4°120.1°
C6C7C8H7A120.4°120.0°
C7C6C5H560.3°60.0°
C7C6C5H5A59.5°60.0°
C7C6H6H6A118.6°120.0°
C6C7H7H7A118.9°120.0°
C6C7C8H8180.0°180.0°
C6C7C8H8A60.0°60.0°
C6C7C8H8B60.0°60.0°
C8C7C6H659.5°60.0°
C8C7C6H6A59.6°60.0°
C8C7H7H7A118.9°120.0°
C7C8H8H8A120.0°120.0°
C7C8H8H8B120.0°120.1°
C7C8H8AH8B120.0°120.0°
H1C1C2H2180.0°0.0°
H1AC1C2H20.1°179.7°
HO1O1C3H362.2°179.9°
H2C2C3H3117.6°65.0°
H3C3C4H4172.2°175.0°
H3C3C4H4A53.6°64.9°
H4C4C5H5179.2°180.0°
H4C4C5H5A61.0°60.1°
H4AC4C5H560.6°60.0°
H4AC4C5H5A179.5°180.0°
H5C5C6H6179.2°180.0°
H5C5C6H6A60.2°60.0°
H5AC5C6H661.0°60.0°
H5AC5C6H6A180.0°180.0°
H6C6C7H7179.9°NaN°
H6C6C7H7A60.9°60.0°
H6AC6C7H760.8°60.0°
H6AC6C7H7A180.0°180.0°
H7C7C8H859.6°60.0°
H7C7C8H8A179.6°180.0°
H7C7C8H8B60.4°60.1°
H7AC7C8H859.7°60.0°
H7AC7C8H8A60.3°60.0°
H7AC7C8H8B179.6°180.0°
H8C8H8AH8B120.0°120.0°

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PDB entries from 2024-08-07

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