3L1

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N6	C6	sing	1.38Å	1.29Å
C6	N1	doub	1.33Å	1.32Å	Aromatic
C6	C5	sing	1.41Å	1.46Å	Aromatic
N1	C2	sing	1.32Å	1.43Å	Aromatic
C2	N3	doub	1.32Å	1.42Å	Aromatic
N3	C4	sing	1.33Å	1.37Å	Aromatic
C4	C5	doub	1.41Å	1.35Å	Aromatic
C4	N9	sing	1.37Å	1.32Å	Aromatic
C5	N7	sing	1.35Å	1.35Å	Aromatic
N7	C8	doub	1.30Å	1.38Å	Aromatic
C8	N9	sing	1.36Å	1.38Å	Aromatic
N9	C1'	sing	1.46Å	1.45Å
C1'	O4'	sing	1.44Å	1.43Å
C1'	C2'	sing	1.55Å	1.51Å
O4'	C4'	sing	1.44Å	1.44Å
C2'	C3'	sing	1.55Å	1.52Å
C3'	O3'	sing	1.43Å	1.42Å
C3'	C4'	sing	1.54Å	1.53Å
C4'	C5'	sing	1.53Å	1.52Å
C5'	O5'	sing	1.43Å	1.44Å
N6	HN6	sing	0.97Å	1.00Å
N6	HN6A	sing	0.97Å	1.00Å
C2	H2	sing	1.08Å	1.08Å
C8	H8	sing	1.08Å	1.08Å
C1'	H1'	sing	1.09Å	1.10Å
C2'	H2'	sing	1.09Å	1.10Å
C2'	H2'A	sing	1.09Å	1.10Å
C3'	H3'	sing	1.09Å	1.10Å
O3'	HO3'	sing	0.97Å	0.95Å
C4'	H4'	sing	1.09Å	1.10Å
C5'	H5'	sing	1.09Å	1.10Å
C5'	H5'A	sing	1.09Å	1.10Å
O5'	HO5'	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N6	C6	N1	126.8°	120.8°
N6	C6	C5	119.8°	120.7°
C6	N6	HN6	109.5°	120.0°
C6	N6	HN6A	109.5°	120.1°
N1	C6	C5	113.4°	118.5°
C6	N1	C2	129.1°	121.2°
C6	C5	C4	120.4°	118.1°
C6	C5	N7	131.5°	134.7°
N1	C2	N3	114.4°	122.5°
N1	C2	H2	122.8°	118.8°
C2	N3	C4	118.4°	120.6°
N3	C2	H2	122.8°	118.8°
N3	C4	C5	124.2°	119.1°
N3	C4	N9	124.1°	134.9°
C5	C4	N9	111.6°	106.0°
C4	C5	N7	108.0°	107.2°
C4	N9	C8	105.3°	107.5°
C4	N9	C1'	126.0°	126.3°
C5	N7	C8	105.9°	109.4°
N7	C8	N9	109.2°	110.0°
N7	C8	H8	125.4°	125.0°
C8	N9	C1'	128.7°	126.2°
N9	C8	H8	125.4°	125.0°
N9	C1'	O4'	106.4°	110.6°
N9	C1'	C2'	110.9°	110.6°
N9	C1'	H1'	108.7°	110.5°
O4'	C1'	C2'	103.4°	103.5°
C1'	O4'	C4'	107.3°	107.0°
O4'	C1'	H1'	115.7°	110.6°
C1'	C2'	C3'	101.4°	102.1°
C2'	C1'	H1'	111.5°	110.8°
C1'	C2'	H2'	112.3°	110.9°
C1'	C2'	H2'A	113.9°	110.9°
O4'	C4'	C3'	105.1°	107.3°
O4'	C4'	C5'	111.6°	109.9°
O4'	C4'	H4'	111.9°	109.8°
C2'	C3'	O3'	112.5°	110.5°
C2'	C3'	C4'	105.3°	104.2°
C3'	C2'	H2'	112.2°	110.9°
C3'	C2'	H2'A	113.9°	110.9°
C2'	C3'	H3'	109.0°	110.5°
O3'	C3'	C4'	105.3°	110.5°
O3'	C3'	H3'	109.0°	110.5°
C3'	O3'	HO3'	109.5°	114.0°
C3'	C4'	C5'	112.1°	109.9°
C4'	C3'	H3'	115.7°	110.6°
C3'	C4'	H4'	111.4°	109.9°
C4'	C5'	O5'	113.8°	109.5°
C5'	C4'	H4'	104.9°	110.0°
C4'	C5'	H5'	108.0°	109.5°
C4'	C5'	H5'A	107.1°	109.4°
O5'	C5'	H5'	108.1°	109.5°
O5'	C5'	H5'A	107.1°	109.5°
C5'	O5'	HO5'	109.5°	114.0°
HN6	N6	HN6A	109.4°	120.0°
H2'	C2'	H2'A	103.5°	110.8°
H5'	C5'	H5'A	112.9°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N6	C6	N1	C5	177.8°	179.7°
N6	C6	N1	C2	178.9°	180.0°
N6	C6	C5	C4	179.2°	179.7°
N6	C6	C5	N7	3.4°	0.0°
C6	N6	HN6	HN6A	120.0°	179.8°
C6	N1	C2	N3	0.9°	0.0°
N1	C6	C5	C4	1.2°	0.6°
N1	C6	C5	N7	178.6°	179.7°
N1	C6	N6	HN6	105.1°	0.0°
N1	C6	N6	HN6A	134.9°	179.7°
C6	N1	C2	H2	179.1°	180.0°
C5	C6	N1	C2	1.0°	0.3°
C6	C5	C4	N3	1.5°	0.6°
C6	C5	C4	N7	177.9°	179.8°
C6	C5	C4	N9	179.8°	179.6°
C6	C5	N7	C8	179.9°	180.0°
C5	C6	N6	HN6	77.2°	179.7°
C5	C6	N6	HN6A	42.8°	0.5°
N1	C2	N3	H2	180.0°	179.9°
N1	C2	N3	C4	0.9°	0.0°
C2	N3	C4	C5	1.3°	0.3°
C2	N3	C4	N9	179.5°	180.0°
N3	C4	C5	N9	178.3°	179.8°
N3	C4	C5	N7	179.4°	179.6°
N3	C4	N9	C8	179.6°	179.2°
N3	C4	N9	C1'	2.9°	0.1°
C4	N3	C2	H2	179.1°	180.0°
C4	C5	N7	C8	2.3°	0.2°
C5	C4	N9	C8	1.2°	0.5°
C5	C4	N9	C1'	178.8°	179.8°
N9	C4	C5	N7	2.3°	0.2°
C4	N9	C8	N7	0.3°	0.7°
C4	N9	C8	C1'	177.5°	179.3°
C4	N9	C1'	O4'	175.6°	156.4°
C4	N9	C1'	C2'	72.6°	89.5°
C4	N9	C8	H8	179.7°	179.9°
C4	N9	C1'	H1'	50.4°	33.6°
C5	N7	C8	N9	1.6°	0.6°
C5	N7	C8	H8	178.4°	180.0°
N7	C8	N9	H8	180.0°	179.4°
N7	C8	N9	C1'	177.2°	180.0°
C8	N9	C1'	O4'	7.4°	22.7°
C8	N9	C1'	C2'	104.4°	91.4°
C8	N9	C1'	H1'	132.7°	145.6°
N9	C1'	O4'	C2'	116.9°	118.5°
N9	C1'	O4'	H1'	120.9°	122.8°
N9	C1'	C2'	H1'	121.3°	122.9°
N9	C1'	O4'	C4'	157.9°	158.6°
N9	C1'	C2'	C3'	153.7°	155.5°
C1'	N9	C8	H8	2.8°	0.6°
N9	C1'	C2'	H2'	33.7°	37.4°
N9	C1'	C2'	H2'A	83.5°	86.3°
O4'	C1'	C2'	H1'	125.0°	118.6°
O4'	C1'	C2'	C3'	40.0°	37.0°
C1'	O4'	C4'	C3'	24.2°	26.5°
C1'	O4'	C4'	C5'	146.0°	145.9°
O4'	C1'	C2'	H2'	80.0°	81.2°
O4'	C1'	C2'	H2'A	162.8°	155.2°
C1'	O4'	C4'	H4'	96.8°	92.9°
C2'	C1'	O4'	C4'	41.0°	40.1°
C1'	C2'	C3'	H2'	120.0°	118.2°
C1'	C2'	C3'	H2'A	122.8°	118.2°
C1'	C2'	C3'	O3'	89.1°	97.8°
C1'	C2'	C3'	C4'	25.1°	20.9°
C1'	C2'	H2'	H2'A	123.3°	123.7°
C1'	C2'	C3'	H3'	149.9°	139.7°
O4'	C4'	C3'	C2'	1.8°	2.0°
O4'	C4'	C3'	O3'	117.3°	120.7°
O4'	C4'	C3'	C5'	121.4°	119.4°
O4'	C4'	C3'	H4'	121.4°	119.4°
O4'	C4'	C5'	H4'	121.4°	121.1°
O4'	C4'	C5'	O5'	40.7°	66.5°
C4'	O4'	C1'	H1'	81.2°	78.6°
O4'	C4'	C3'	H3'	122.3°	116.7°
O4'	C4'	C5'	H5'	79.3°	53.6°
O4'	C4'	C5'	H5'A	158.8°	173.5°
C2'	C3'	O3'	C4'	114.2°	114.7°
C2'	C3'	O3'	H3'	121.0°	122.6°
C2'	C3'	C4'	H3'	120.5°	118.8°
C2'	C3'	C4'	C5'	119.6°	121.4°
C3'	C2'	C1'	H1'	85.0°	81.6°
C3'	C2'	H2'	H2'A	123.3°	123.6°
C2'	C3'	O3'	HO3'	53.0°	61.5°
C2'	C3'	C4'	H4'	123.2°	117.3°
O3'	C3'	C4'	H3'	120.4°	122.6°
O3'	C3'	C4'	C5'	121.4°	119.9°
O3'	C3'	C2'	H2'	150.9°	144.1°
O3'	C3'	C2'	H2'A	33.7°	20.5°
O3'	C3'	C4'	H4'	4.1°	1.3°
C3'	C4'	C5'	H4'	121.1°	121.1°
C3'	C4'	C5'	O5'	158.3°	175.7°
C4'	C3'	C2'	H2'	94.9°	97.3°
C4'	C3'	C2'	H2'A	147.9°	139.1°
C4'	C3'	O3'	HO3'	61.2°	176.2°
C3'	C4'	C5'	H5'	38.3°	64.3°
C3'	C4'	C5'	H5'A	83.6°	55.7°
C4'	C5'	O5'	H5'	120.0°	120.0°
C4'	C5'	O5'	H5'A	118.1°	120.0°
C5'	C4'	C3'	H3'	0.9°	2.7°
C4'	C5'	H5'	H5'A	118.2°	120.0°
C4'	C5'	O5'	HO5'	170.8°	180.0°
O5'	C5'	C4'	H4'	80.7°	54.6°
O5'	C5'	H5'	H5'A	118.2°	120.0°
H1'	C1'	C2'	H2'	155.0°	160.2°
H1'	C1'	C2'	H2'A	37.9°	36.6°
H2'	C2'	C3'	H3'	29.9°	21.5°
H2'A	C2'	C3'	H3'	87.3°	102.1°
H3'	C3'	O3'	HO3'	174.0°	61.1°
H3'	C3'	C4'	H4'	116.3°	123.9°
H4'	C4'	C5'	H5'	159.3°	174.6°
H4'	C4'	C5'	H5'A	37.4°	65.4°
H5'	C5'	O5'	HO5'	50.8°	60.0°
H5'A	C5'	O5'	HO5'	71.1°	60.0°

Definition date:	2008-02-18
Last modified:	2021-03-01
Release status:	REL
Processing site:	PDBJ
Derived from:	2ZI4