3JC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1 | C5 | doub | 1.21Å | 1.22Å | |
| C15 | C1 | sing | 1.51Å | 1.49Å | |
| C5 | C6 | sing | 1.52Å | 1.50Å | |
| C5 | C2 | sing | 1.47Å | 1.46Å | |
| C1 | C2 | doub | 1.40Å | 1.37Å | Aromatic |
| C1 | N1 | sing | 1.32Å | 1.33Å | Aromatic |
| C6 | C7 | sing | 1.53Å | 1.51Å | |
| C2 | C3 | sing | 1.40Å | 1.37Å | Aromatic |
| N1 | C4 | doub | 1.33Å | 1.34Å | Aromatic |
| C7 | C8 | sing | 1.51Å | 1.50Å | |
| C7 | C9 | sing | 1.53Å | 1.51Å | |
| C3 | C9 | sing | 1.50Å | 1.49Å | |
| C3 | N2 | doub | 1.32Å | 1.33Å | Aromatic |
| C4 | N2 | sing | 1.33Å | 1.34Å | Aromatic |
| C4 | N3 | sing | 1.38Å | 1.39Å | |
| C8 | C14 | doub | 1.38Å | 1.38Å | Aromatic |
| C8 | C10 | sing | 1.38Å | 1.37Å | Aromatic |
| C14 | C13 | sing | 1.38Å | 1.38Å | Aromatic |
| C10 | C11 | doub | 1.38Å | 1.37Å | Aromatic |
| C13 | C12 | doub | 1.38Å | 1.37Å | Aromatic |
| C11 | C12 | sing | 1.38Å | 1.37Å | Aromatic |
| C11 | H1 | sing | 1.08Å | 1.08Å | |
| C12 | H2 | sing | 1.08Å | 1.08Å | |
| C13 | H3 | sing | 1.08Å | 1.08Å | |
| C14 | H4 | sing | 1.08Å | 1.08Å | |
| C15 | H5 | sing | 1.09Å | 1.10Å | |
| C15 | H6 | sing | 1.09Å | 1.10Å | |
| C15 | H7 | sing | 1.09Å | 1.10Å | |
| N3 | H8 | sing | 0.97Å | 1.00Å | |
| N3 | H9 | sing | 0.97Å | 1.00Å | |
| C6 | H10 | sing | 1.09Å | 1.10Å | |
| C6 | H11 | sing | 1.09Å | 1.10Å | |
| C7 | H12 | sing | 1.09Å | 1.10Å | |
| C9 | H13 | sing | 1.09Å | 1.10Å | |
| C9 | H14 | sing | 1.09Å | 1.10Å | |
| C10 | H15 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1 | C5 | C6 | 123.3° | 121.2° |
| O1 | C5 | C2 | 120.0° | 121.3° |
| C15 | C1 | C2 | 122.4° | 120.7° |
| C15 | C1 | N1 | 116.1° | 120.7° |
| C1 | C15 | H5 | 109.5° | 109.4° |
| C1 | C15 | H6 | 109.5° | 109.5° |
| C1 | C15 | H7 | 109.5° | 109.5° |
| C6 | C5 | C2 | 116.7° | 117.5° |
| C5 | C6 | C7 | 110.2° | 107.5° |
| C5 | C6 | H10 | 109.3° | 109.8° |
| C5 | C6 | H11 | 109.3° | 109.8° |
| C5 | C2 | C1 | 121.2° | 120.6° |
| C5 | C2 | C3 | 120.6° | 120.3° |
| C2 | C1 | N1 | 121.5° | 118.6° |
| C1 | C2 | C3 | 118.2° | 119.1° |
| C1 | N1 | C4 | 116.5° | 120.8° |
| C6 | C7 | C8 | 108.7° | 109.5° |
| C6 | C7 | C9 | 110.2° | 109.5° |
| C7 | C6 | H10 | 109.3° | 109.8° |
| C7 | C6 | H11 | 109.3° | 109.9° |
| C6 | C7 | H12 | 108.8° | 109.5° |
| C2 | C3 | C9 | 122.4° | 121.6° |
| C2 | C3 | N2 | 121.2° | 118.5° |
| N1 | C4 | N2 | 125.8° | 122.3° |
| N1 | C4 | N3 | 116.8° | 118.9° |
| C8 | C7 | C9 | 111.5° | 109.4° |
| C7 | C8 | C14 | 121.0° | 120.0° |
| C7 | C8 | C10 | 120.0° | 120.0° |
| C8 | C7 | H12 | 108.8° | 109.5° |
| C7 | C9 | C3 | 111.0° | 111.1° |
| C9 | C7 | H12 | 108.7° | 109.4° |
| C7 | C9 | H13 | 109.1° | 109.2° |
| C7 | C9 | H14 | 109.1° | 109.2° |
| C9 | C3 | N2 | 116.4° | 119.9° |
| C3 | C9 | H13 | 109.1° | 109.2° |
| C3 | C9 | H14 | 109.1° | 109.1° |
| C3 | N2 | C4 | 116.8° | 120.8° |
| N2 | C4 | N3 | 117.4° | 118.8° |
| C4 | N3 | H8 | 109.5° | 120.0° |
| C4 | N3 | H9 | 109.4° | 120.0° |
| C14 | C8 | C10 | 118.9° | 120.0° |
| C8 | C14 | C13 | 120.7° | 120.0° |
| C8 | C14 | H4 | 119.7° | 120.0° |
| C8 | C10 | C11 | 120.6° | 120.0° |
| C8 | C10 | H15 | 119.7° | 120.0° |
| C14 | C13 | C12 | 120.0° | 120.0° |
| C14 | C13 | H3 | 120.0° | 119.9° |
| C13 | C14 | H4 | 119.7° | 120.1° |
| C10 | C11 | C12 | 120.2° | 120.0° |
| C10 | C11 | H1 | 119.9° | 120.1° |
| C11 | C10 | H15 | 119.7° | 120.0° |
| C13 | C12 | C11 | 119.5° | 120.0° |
| C13 | C12 | H2 | 120.2° | 120.0° |
| C12 | C13 | H3 | 120.0° | 120.1° |
| C12 | C11 | H1 | 119.9° | 120.0° |
| C11 | C12 | H2 | 120.3° | 120.0° |
| H5 | C15 | H6 | 109.5° | 109.4° |
| H5 | C15 | H7 | 109.5° | 109.5° |
| H6 | C15 | H7 | 109.5° | 109.5° |
| H8 | N3 | H9 | 109.5° | 119.9° |
| H10 | C6 | H11 | 109.5° | 109.9° |
| H13 | C9 | H14 | 109.5° | 109.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1 | C5 | C6 | C2 | 178.3° | 179.9° |
| O1 | C5 | C2 | C1 | 7.4° | 11.3° |
| O1 | C5 | C6 | C7 | 142.7° | 137.4° |
| O1 | C5 | C2 | C3 | 173.0° | 168.4° |
| O1 | C5 | C6 | H10 | 22.6° | 17.9° |
| O1 | C5 | C6 | H11 | 97.2° | 103.1° |
| C15 | C1 | C2 | C5 | 0.3° | 0.1° |
| C15 | C1 | C2 | N1 | 179.9° | 179.8° |
| C15 | C1 | C2 | C3 | 179.9° | 179.9° |
| C15 | C1 | N1 | C4 | 179.7° | 179.7° |
| C1 | C15 | H5 | H6 | 120.0° | 120.0° |
| C1 | C15 | H5 | H7 | 120.0° | 120.0° |
| C1 | C15 | H6 | H7 | 120.0° | 120.0° |
| C6 | C5 | C2 | C1 | 170.9° | 168.7° |
| C5 | C6 | C7 | H10 | 120.1° | 119.5° |
| C5 | C6 | C7 | H11 | 120.1° | 119.5° |
| C6 | C5 | C2 | C3 | 8.7° | 11.5° |
| C5 | C6 | C7 | C8 | 176.4° | 176.1° |
| C5 | C6 | C7 | C9 | 61.1° | 64.0° |
| C5 | C6 | H10 | H11 | 119.7° | 120.9° |
| C5 | C6 | C7 | H12 | 58.0° | 56.0° |
| C5 | C2 | C1 | C3 | 179.6° | 179.8° |
| C5 | C2 | C1 | N1 | 179.8° | 179.7° |
| C2 | C5 | C6 | C7 | 39.0° | 42.5° |
| C5 | C2 | C3 | C9 | 0.1° | 0.6° |
| C5 | C2 | C3 | N2 | 179.4° | 179.6° |
| C2 | C5 | C6 | H10 | 159.1° | 162.0° |
| C2 | C5 | C6 | H11 | 81.1° | 77.0° |
| C2 | C1 | N1 | C4 | 0.4° | 0.0° |
| C1 | C2 | C3 | C9 | 179.7° | 179.7° |
| C1 | C2 | C3 | N2 | 0.2° | 0.2° |
| C2 | C1 | C15 | H5 | 179.9° | 90.0° |
| C2 | C1 | C15 | H6 | 60.1° | 150.0° |
| C2 | C1 | C15 | H7 | 59.9° | 30.0° |
| N1 | C1 | C2 | C3 | 0.2° | 0.1° |
| C1 | N1 | C4 | N2 | 0.4° | 0.1° |
| C1 | N1 | C4 | N3 | 179.8° | 179.9° |
| N1 | C1 | C15 | H5 | 0.0° | 89.7° |
| N1 | C1 | C15 | H6 | 120.0° | 30.2° |
| N1 | C1 | C15 | H7 | 120.0° | 150.2° |
| C6 | C7 | C8 | C9 | 121.7° | 120.0° |
| C6 | C7 | C8 | H12 | 118.4° | 120.1° |
| C6 | C7 | C9 | H12 | 119.1° | 120.0° |
| C6 | C7 | C9 | C3 | 52.1° | 54.4° |
| C6 | C7 | C8 | C14 | 20.5° | 120.0° |
| C6 | C7 | C8 | C10 | 158.9° | 60.2° |
| C7 | C6 | H10 | H11 | 119.7° | 121.1° |
| C6 | C7 | C9 | H13 | 172.3° | 66.1° |
| C6 | C7 | C9 | H14 | 68.1° | 174.8° |
| C2 | C3 | C9 | C7 | 22.0° | 22.5° |
| C2 | C3 | C9 | N2 | 179.5° | 179.8° |
| C2 | C3 | N2 | C4 | 0.3° | 0.1° |
| C2 | C3 | C9 | H13 | 142.3° | 98.0° |
| C2 | C3 | C9 | H14 | 98.2° | 142.9° |
| N1 | C4 | N2 | C3 | 0.0° | 0.0° |
| N1 | C4 | N2 | N3 | 179.8° | 180.0° |
| N1 | C4 | N3 | H8 | 0.0° | 0.0° |
| N1 | C4 | N3 | H9 | 120.0° | 180.0° |
| C8 | C7 | C9 | H12 | 120.0° | 120.0° |
| C8 | C7 | C9 | C3 | 172.9° | 174.4° |
| C7 | C8 | C14 | C10 | 179.4° | 179.8° |
| C7 | C8 | C14 | C13 | 179.3° | 180.0° |
| C7 | C8 | C10 | C11 | 179.4° | 179.7° |
| C7 | C8 | C14 | H4 | 0.7° | 0.0° |
| C8 | C7 | C6 | H10 | 56.3° | 56.6° |
| C8 | C7 | C6 | H11 | 63.5° | 64.4° |
| C8 | C7 | C9 | H13 | 66.8° | 53.9° |
| C8 | C7 | C9 | H14 | 52.7° | 65.2° |
| C7 | C8 | C10 | H15 | 0.6° | 0.1° |
| C7 | C9 | C3 | H13 | 120.3° | 120.5° |
| C7 | C9 | C3 | H14 | 120.2° | 120.4° |
| C7 | C9 | C3 | N2 | 158.5° | 157.7° |
| C9 | C7 | C8 | C14 | 101.2° | 120.0° |
| C9 | C7 | C8 | C10 | 79.4° | 59.8° |
| C9 | C7 | C6 | H10 | 178.8° | 176.5° |
| C9 | C7 | C6 | H11 | 59.0° | 55.5° |
| C7 | C9 | H13 | H14 | 119.3° | 119.2° |
| C9 | C3 | N2 | C4 | 179.8° | 179.7° |
| C3 | C9 | C7 | H12 | 67.0° | 65.6° |
| C3 | C9 | H13 | H14 | 119.3° | 119.1° |
| C3 | N2 | C4 | N3 | 179.8° | 180.0° |
| N2 | C3 | C9 | H13 | 38.2° | 81.9° |
| N2 | C3 | C9 | H14 | 81.3° | 37.2° |
| N2 | C4 | N3 | H8 | 179.8° | 180.0° |
| N2 | C4 | N3 | H9 | 59.8° | 0.0° |
| C4 | N3 | H8 | H9 | 120.0° | 180.0° |
| C8 | C14 | C13 | H4 | 180.0° | 179.9° |
| C14 | C8 | C10 | C11 | 0.0° | 0.5° |
| C8 | C14 | C13 | C12 | 0.0° | 0.0° |
| C8 | C14 | C13 | H3 | 180.0° | 180.0° |
| C14 | C8 | C7 | H12 | 138.9° | 0.1° |
| C14 | C8 | C10 | H15 | 180.0° | 179.7° |
| C10 | C8 | C14 | C13 | 0.0° | 0.3° |
| C8 | C10 | C11 | H15 | 180.0° | 179.8° |
| C8 | C10 | C11 | C12 | 0.1° | 0.5° |
| C8 | C10 | C11 | H1 | 179.9° | 179.8° |
| C10 | C8 | C14 | H4 | 180.0° | 179.8° |
| C10 | C8 | C7 | H12 | 40.5° | 179.7° |
| C14 | C13 | C12 | H3 | 180.0° | 180.0° |
| C14 | C13 | C12 | C11 | 0.1° | 0.0° |
| C14 | C13 | C12 | H2 | 180.0° | 180.0° |
| C10 | C11 | C12 | C13 | 0.1° | 0.3° |
| C10 | C11 | C12 | H1 | 180.0° | 179.8° |
| C10 | C11 | C12 | H2 | 179.9° | 179.7° |
| C13 | C12 | C11 | H2 | 180.0° | 180.0° |
| C13 | C12 | C11 | H1 | 179.9° | 180.0° |
| C12 | C13 | C14 | H4 | 180.0° | 179.9° |
| C11 | C12 | C13 | H3 | 179.9° | 180.0° |
| C12 | C11 | C10 | H15 | 179.9° | 179.7° |
| H1 | C11 | C12 | H2 | 0.1° | 0.0° |
| H1 | C11 | C10 | H15 | 0.1° | 0.1° |
| H2 | C12 | C13 | H3 | 0.1° | 0.0° |
| H3 | C13 | C14 | H4 | 0.0° | 0.0° |
| H5 | C15 | H6 | H7 | 120.0° | 120.0° |
| H10 | C6 | C7 | H12 | 62.1° | 63.5° |
| H11 | C6 | C7 | H12 | 178.1° | 175.5° |
| H12 | C7 | C9 | H13 | 53.2° | 173.9° |
| H12 | C7 | C9 | H14 | 172.7° | 54.8° |






