3HX
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
NO | NH1 | sing | 1.37Å | 1.40Å | |
NO | O3 | doub | 1.23Å | 1.27Å | |
NO | O2 | sing | 1.24Å | 1.26Å | |
N | CA | sing | 1.47Å | 1.49Å | |
N | HN1 | sing | 0.99Å | 1.00Å | |
N | HN2 | sing | 0.99Å | 1.00Å | |
CA | CB | sing | 1.54Å | 1.59Å | |
CA | C | sing | 1.54Å | 1.58Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
C | NA | sing | 1.46Å | 1.49Å | |
C | H1 | sing | 1.10Å | 1.10Å | |
C | H2 | sing | 1.10Å | 1.10Å | |
CB | CG | sing | 1.54Å | 1.56Å | |
CB | HB1 | sing | 1.10Å | 1.10Å | |
CB | HB2 | sing | 1.10Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.55Å | |
CG | HG1 | sing | 1.10Å | 1.10Å | |
CG | HG2 | sing | 1.10Å | 1.10Å | |
CD | NE | sing | 1.46Å | 1.52Å | |
CD | HD1 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.10Å | 1.10Å | |
NE | CZ | sing | 1.38Å | 1.33Å | |
NE | HNE | sing | 1.01Å | 1.00Å | |
CZ | NH2 | doub | 1.30Å | 1.37Å | |
CZ | NH1 | sing | 1.39Å | 1.38Å | |
NH1 | HNH1 | sing | 1.02Å | 1.00Å | |
NH2 | HNH2 | sing | 1.02Å | 1.00Å | |
NA | O1' | sing | 1.45Å | 1.40Å | |
NA | C1' | sing | 1.46Å | 1.51Å | |
O1' | HO1' | sing | 0.97Å | 0.95Å | |
NB | C2' | sing | 1.44Å | 1.51Å | |
NB | HNB1 | sing | 1.01Å | 1.00Å | |
NB | HNB2 | sing | 1.01Å | 1.00Å | |
C1' | C2' | sing | 1.52Å | 1.55Å | |
C1' | H1'1 | sing | 1.09Å | 1.10Å | |
C1' | H1'2 | sing | 1.09Å | 1.10Å | |
C2' | H2'1 | sing | 1.09Å | 1.10Å | |
C2' | H2'2 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
NH1 | NO | O3 | 122.0° | 119.6° |
NH1 | NO | O2 | 118.7° | 114.4° |
NO | NH1 | CZ | 123.6° | 123.6° |
NO | NH1 | HNH1 | 118.2° | 120.4° |
O3 | NO | O2 | 119.2° | 126.0° |
CA | N | HN1 | 109.5° | 117.7° |
CA | N | HN2 | 109.5° | 117.8° |
N | CA | CB | 105.2° | 110.1° |
N | CA | C | 109.3° | 108.7° |
N | CA | HA | 114.6° | 107.8° |
HN1 | N | HN2 | 109.4° | 123.1° |
CB | CA | C | 115.3° | 112.3° |
CB | CA | HA | 108.4° | 108.7° |
CA | CB | CG | 116.9° | 113.1° |
CA | CB | HB1 | 107.1° | 109.8° |
CA | CB | HB2 | 105.4° | 109.1° |
C | CA | HA | 104.3° | 109.1° |
CA | C | NA | 117.5° | 111.9° |
CA | C | H1 | 106.9° | 110.1° |
CA | C | H2 | 105.0° | 110.4° |
NA | C | H1 | 106.9° | 108.3° |
NA | C | H2 | 105.0° | 108.7° |
C | NA | O1' | 121.5° | 104.6° |
C | NA | C1' | 116.3° | 111.0° |
H1 | C | H2 | 116.0° | 107.3° |
CG | CB | HB1 | 107.1° | 109.3° |
CG | CB | HB2 | 105.3° | 108.8° |
CB | CG | CD | 116.5° | 113.0° |
CB | CG | HG1 | 107.2° | 109.6° |
CB | CG | HG2 | 105.6° | 109.7° |
HB1 | CB | HB2 | 115.5° | 106.5° |
CD | CG | HG1 | 107.2° | 109.7° |
CD | CG | HG2 | 105.5° | 107.9° |
CG | CD | NE | 111.2° | 112.0° |
CG | CD | HD1 | 108.9° | 110.0° |
CG | CD | HD2 | 108.5° | 109.1° |
HG1 | CG | HG2 | 115.2° | 106.7° |
NE | CD | HD1 | 108.9° | 109.3° |
NE | CD | HD2 | 108.6° | 108.9° |
CD | NE | CZ | 121.6° | 124.2° |
CD | NE | HNE | 119.2° | 115.6° |
HD1 | CD | HD2 | 110.8° | 107.4° |
CZ | NE | HNE | 119.2° | 120.1° |
NE | CZ | NH2 | 117.2° | 122.0° |
NE | CZ | NH1 | 121.1° | 110.1° |
NH2 | CZ | NH1 | 121.6° | 128.0° |
CZ | NH2 | HNH2 | 109.6° | 110.1° |
CZ | NH1 | HNH1 | 118.2° | 115.9° |
O1' | NA | C1' | 122.1° | 104.6° |
NA | O1' | HO1' | 109.5° | 99.5° |
NA | C1' | C2' | 115.4° | 112.0° |
NA | C1' | H1'1 | 107.5° | 107.1° |
NA | C1' | H1'2 | 106.1° | 107.5° |
C2' | NB | HNB1 | 109.5° | 119.1° |
C2' | NB | HNB2 | 109.5° | 119.1° |
NB | C2' | C1' | 114.9° | 112.1° |
NB | C2' | H2'1 | 107.7° | 107.4° |
NB | C2' | H2'2 | 106.5° | 107.0° |
HNB1 | NB | HNB2 | 109.5° | 120.3° |
C2' | C1' | H1'1 | 107.6° | 110.3° |
C2' | C1' | H1'2 | 106.2° | 111.3° |
C1' | C2' | H2'1 | 107.7° | 111.4° |
C1' | C2' | H2'2 | 106.5° | 110.1° |
H1'1 | C1' | H1'2 | 114.2° | 108.5° |
H2'1 | C2' | H2'2 | 113.8° | 108.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
NH1 | NO | O3 | O2 | 179.1° | 179.9° |
NO | NH1 | CZ | NE | 155.7° | 179.7° |
NO | NH1 | CZ | NH2 | 24.4° | 0.2° |
NO | NH1 | CZ | HNH1 | 180.0° | 179.7° |
O3 | NO | NH1 | CZ | 29.5° | 0.3° |
O3 | NO | NH1 | HNH1 | 150.5° | 180.0° |
O2 | NO | NH1 | CZ | 151.4° | 179.8° |
O2 | NO | NH1 | HNH1 | 28.6° | 0.1° |
CA | N | HN1 | HN2 | 120.0° | 165.9° |
N | CA | CB | C | 120.5° | 121.3° |
N | CA | CB | HA | 123.0° | 117.8° |
N | CA | C | HA | 123.0° | 117.3° |
N | CA | C | NA | 27.8° | 177.4° |
N | CA | C | H1 | 92.2° | 62.1° |
N | CA | C | H2 | 144.0° | 56.2° |
N | CA | CB | CG | 159.3° | 57.9° |
N | CA | CB | HB1 | 39.3° | 179.8° |
N | CA | CB | HB2 | 84.2° | 63.4° |
HN1 | N | CA | CB | 70.7° | 126.7° |
HN1 | N | CA | C | 164.9° | 109.9° |
HN1 | N | CA | HA | 48.3° | 8.2° |
HN2 | N | CA | CB | 169.3° | 40.0° |
HN2 | N | CA | C | 44.9° | 83.4° |
HN2 | N | CA | HA | 71.7° | 158.4° |
CB | CA | C | HA | 118.8° | 120.7° |
CB | CA | C | NA | 90.5° | 60.5° |
CB | CA | C | H1 | 149.5° | 60.0° |
CB | CA | C | H2 | 25.8° | 178.2° |
CA | CB | CG | HB1 | 120.0° | 122.6° |
CA | CB | CG | HB2 | 116.6° | 121.4° |
CA | CB | HB1 | HB2 | 117.0° | 118.0° |
CA | CB | CG | CD | 34.8° | 177.3° |
CA | CB | CG | HG1 | 154.8° | 54.6° |
CA | CB | CG | HG2 | 81.9° | 62.2° |
CA | C | NA | H1 | 120.0° | 121.5° |
CA | C | NA | H2 | 116.2° | 122.2° |
CA | C | H1 | H2 | 116.7° | 120.1° |
C | CA | CB | CG | 80.2° | 179.1° |
C | CA | CB | HB1 | 159.8° | 58.5° |
C | CA | CB | HB2 | 36.3° | 57.9° |
CA | C | NA | O1' | 59.2° | 66.2° |
CA | C | NA | C1' | 122.0° | 178.5° |
HA | CA | C | NA | 150.8° | 60.1° |
HA | CA | C | H1 | 30.8° | 179.3° |
HA | CA | C | H2 | 93.0° | 61.1° |
HA | CA | CB | CG | 36.3° | 60.0° |
HA | CA | CB | HB1 | 83.7° | 62.4° |
HA | CA | CB | HB2 | 152.8° | 178.8° |
NA | C | H1 | H2 | 116.7° | 117.2° |
C | NA | O1' | C1' | 178.7° | 116.8° |
C | NA | O1' | HO1' | 84.0° | 121.4° |
C | NA | C1' | C2' | 176.2° | 180.0° |
C | NA | C1' | H1'1 | 56.1° | 59.0° |
C | NA | C1' | H1'2 | 66.5° | 57.4° |
H1 | C | NA | O1' | 179.2° | 172.2° |
H1 | C | NA | C1' | 2.0° | 60.0° |
H2 | C | NA | O1' | 57.0° | 56.0° |
H2 | C | NA | C1' | 121.8° | 56.3° |
CG | CB | HB1 | HB2 | 116.9° | 117.4° |
CB | CG | CD | HG1 | 120.0° | 122.6° |
CB | CG | CD | HG2 | 116.7° | 121.5° |
CB | CG | HG1 | HG2 | 117.1° | 118.7° |
CB | CG | CD | NE | 131.4° | 178.3° |
CB | CG | CD | HD1 | 11.4° | 60.0° |
CB | CG | CD | HD2 | 109.3° | 57.6° |
HB1 | CB | CG | CD | 85.2° | 60.0° |
HB1 | CB | CG | HG1 | 34.9° | 177.2° |
HB1 | CB | CG | HG2 | 158.1° | 60.4° |
HB2 | CB | CG | CD | 151.4° | 56.0° |
HB2 | CB | CG | HG1 | 88.6° | 66.8° |
HB2 | CB | CG | HG2 | 34.7° | 176.4° |
CD | CG | HG1 | HG2 | 117.1° | 116.6° |
CG | CD | NE | HD1 | 120.0° | 122.2° |
CG | CD | NE | HD2 | 119.3° | 120.8° |
CG | CD | HD1 | HD2 | 119.3° | 118.6° |
CG | CD | NE | CZ | 123.7° | 177.9° |
CG | CD | NE | HNE | 56.3° | 2.2° |
HG1 | CG | CD | NE | 11.4° | 59.1° |
HG1 | CG | CD | HD1 | 108.6° | 62.7° |
HG1 | CG | CD | HD2 | 130.7° | 179.7° |
HG2 | CG | CD | NE | 111.9° | 56.8° |
HG2 | CG | CD | HD1 | 128.1° | 178.6° |
HG2 | CG | CD | HD2 | 7.4° | 63.9° |
NE | CD | HD1 | HD2 | 119.3° | 118.0° |
CD | NE | CZ | HNE | 180.0° | 180.0° |
CD | NE | CZ | NH2 | 179.5° | 0.0° |
CD | NE | CZ | NH1 | 0.4° | 180.0° |
HD1 | CD | NE | CZ | 116.3° | 59.9° |
HD1 | CD | NE | HNE | 63.7° | 120.0° |
HD2 | CD | NE | CZ | 4.4° | 57.1° |
HD2 | CD | NE | HNE | 175.6° | 123.0° |
NE | CZ | NH2 | NH1 | 179.9° | 179.9° |
NE | CZ | NH1 | HNH1 | 24.3° | 0.0° |
NE | CZ | NH2 | HNH2 | 180.0° | 179.9° |
HNE | NE | CZ | NH2 | 0.5° | 180.0° |
HNE | NE | CZ | NH1 | 179.6° | 0.1° |
NH2 | CZ | NH1 | HNH1 | 155.6° | 180.0° |
NH1 | CZ | NH2 | HNH2 | 0.1° | 0.1° |
O1' | NA | C1' | C2' | 2.6° | 67.8° |
O1' | NA | C1' | H1'1 | 122.6° | 53.2° |
O1' | NA | C1' | H1'2 | 114.7° | 169.6° |
C1' | NA | O1' | HO1' | 94.7° | 121.8° |
NA | C1' | C2' | NB | 101.8° | 179.1° |
NA | C1' | C2' | H1'1 | 120.0° | 119.1° |
NA | C1' | C2' | H1'2 | 117.3° | 120.4° |
NA | C1' | H1'1 | H1'2 | 117.5° | 115.7° |
NA | C1' | C2' | H2'1 | 18.2° | 60.5° |
NA | C1' | C2' | H2'2 | 140.6° | 60.0° |
C2' | NB | HNB1 | HNB2 | 120.0° | 166.4° |
NB | C2' | C1' | H2'1 | 120.0° | 120.4° |
NB | C2' | C1' | H2'2 | 117.6° | 119.1° |
NB | C2' | C1' | H1'1 | 138.2° | 60.0° |
NB | C2' | C1' | H1'2 | 15.5° | 60.5° |
NB | C2' | H2'1 | H2'2 | 117.8° | 115.4° |
HNB1 | NB | C2' | C1' | 20.7° | 133.2° |
HNB1 | NB | C2' | H2'1 | 99.3° | 104.0° |
HNB1 | NB | C2' | H2'2 | 138.3° | 12.4° |
HNB2 | NB | C2' | C1' | 99.4° | 33.4° |
HNB2 | NB | C2' | H2'1 | 140.6° | 89.4° |
HNB2 | NB | C2' | H2'2 | 18.2° | 154.2° |
C2' | C1' | H1'1 | H1'2 | 117.6° | 122.2° |
C1' | C2' | H2'1 | H2'2 | 117.8° | 121.4° |
H1'1 | C1' | C2' | H2'1 | 101.8° | 179.6° |
H1'1 | C1' | C2' | H2'2 | 20.6° | 59.1° |
H1'2 | C1' | C2' | H2'1 | 135.5° | 59.9° |
H1'2 | C1' | C2' | H2'2 | 102.1° | 179.6° |