3EJ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C6 | C1 | doub | 1.38Å | 1.38Å | Aromatic |
C1 | C2 | sing | 1.40Å | 1.38Å | Aromatic |
C1 | H1 | sing | 1.08Å | 1.08Å | |
C3 | C2 | doub | 1.40Å | 1.38Å | Aromatic |
C2 | C7 | sing | 1.48Å | 1.47Å | |
C4 | C3 | sing | 1.38Å | 1.38Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C5 | C4 | doub | 1.38Å | 1.38Å | Aromatic |
C4 | H4 | sing | 1.08Å | 1.08Å | |
C10 | C5 | sing | 1.51Å | 1.50Å | |
C5 | C6 | sing | 1.38Å | 1.38Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C7 | O8 | doub | 1.21Å | 1.26Å | |
C7 | O9 | sing | 1.35Å | 1.26Å | |
O9 | HO9 | sing | 0.97Å | 0.95Å | |
N11 | C10 | sing | 1.47Å | 1.45Å | |
C10 | H10 | sing | 1.09Å | 1.10Å | |
C10 | H10A | sing | 1.09Å | 1.10Å | |
N12 | N11 | sing | 1.29Å | 1.34Å | Aromatic |
N11 | N15 | sing | 1.29Å | 1.34Å | Aromatic |
N12 | N13 | doub | 1.29Å | 1.33Å | Aromatic |
N13 | C14 | sing | 1.34Å | 1.37Å | Aromatic |
C14 | N15 | doub | 1.32Å | 1.33Å | Aromatic |
C14 | C16 | sing | 1.48Å | 1.43Å | Aromatic |
C16 | C17 | doub | 1.40Å | 1.38Å | Aromatic |
C16 | C21 | sing | 1.40Å | 1.38Å | Aromatic |
C17 | C18 | sing | 1.39Å | 1.38Å | Aromatic |
C17 | H17 | sing | 1.08Å | 1.08Å | |
C18 | C22 | sing | 1.48Å | 1.47Å | |
C18 | N19 | doub | 1.33Å | 1.34Å | Aromatic |
C20 | N19 | sing | 1.32Å | 1.34Å | Aromatic |
C21 | C20 | doub | 1.38Å | 1.38Å | Aromatic |
C20 | H20 | sing | 1.08Å | 1.08Å | |
C21 | H21 | sing | 1.08Å | 1.08Å | |
O26 | C22 | doub | 1.22Å | 1.22Å | |
C22 | N23 | sing | 1.35Å | 1.38Å | |
N23 | C24 | sing | 1.47Å | 1.45Å | |
N23 | HN23 | sing | 0.97Å | 1.00Å | |
C24 | C25 | sing | 1.51Å | 1.50Å | |
C24 | H24 | sing | 1.09Å | 1.10Å | |
C24 | H24A | sing | 1.09Å | 1.10Å | |
C25 | C31 | doub | 1.38Å | 1.38Å | Aromatic |
C25 | C27 | sing | 1.38Å | 1.38Å | Aromatic |
C27 | C28 | doub | 1.38Å | 1.38Å | Aromatic |
C27 | H27 | sing | 1.08Å | 1.08Å | |
C28 | C29 | sing | 1.38Å | 1.38Å | Aromatic |
C28 | H28 | sing | 1.08Å | 1.08Å | |
C30 | C29 | doub | 1.38Å | 1.38Å | Aromatic |
C29 | H29 | sing | 1.08Å | 1.08Å | |
C31 | C30 | sing | 1.38Å | 1.38Å | Aromatic |
C30 | F32 | sing | 1.35Å | 1.34Å | |
C31 | H31 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C6 | C1 | C2 | 119.2° | 119.9° |
C6 | C1 | H1 | 120.4° | 120.1° |
C1 | C6 | C5 | 121.1° | 120.1° |
C1 | C6 | H6 | 119.5° | 120.0° |
C2 | C1 | H1 | 120.4° | 120.0° |
C1 | C2 | C3 | 120.0° | 119.7° |
C1 | C2 | C7 | 121.5° | 120.2° |
C3 | C2 | C7 | 118.5° | 120.2° |
C2 | C3 | C4 | 120.4° | 119.9° |
C2 | C3 | H3 | 119.8° | 120.1° |
C2 | C7 | O8 | 119.0° | 120.0° |
C2 | C7 | O9 | 113.7° | 120.0° |
C4 | C3 | H3 | 119.8° | 120.0° |
C3 | C4 | C5 | 120.0° | 120.1° |
C3 | C4 | H4 | 120.0° | 120.0° |
C5 | C4 | H4 | 120.0° | 119.9° |
C4 | C5 | C10 | 118.3° | 119.8° |
C4 | C5 | C6 | 119.3° | 120.3° |
C10 | C5 | C6 | 122.4° | 119.9° |
C5 | C10 | N11 | 111.1° | 109.5° |
C5 | C10 | H10 | 108.9° | 109.4° |
C5 | C10 | H10A | 108.9° | 109.5° |
C5 | C6 | H6 | 119.5° | 119.9° |
O8 | C7 | O9 | 127.3° | 119.9° |
C7 | O9 | HO9 | 109.5° | 117.0° |
N11 | C10 | H10 | 108.9° | 109.4° |
N11 | C10 | H10A | 108.9° | 109.5° |
C10 | N11 | N12 | 121.9° | 125.3° |
C10 | N11 | N15 | 120.6° | 125.4° |
H10 | C10 | H10A | 110.0° | 109.5° |
N12 | N11 | N15 | 117.5° | 109.4° |
N11 | N12 | N13 | 103.6° | 108.9° |
N11 | N15 | C14 | 98.6° | 107.8° |
N12 | N13 | C14 | 106.3° | 107.3° |
N13 | C14 | N15 | 114.1° | 106.6° |
N13 | C14 | C16 | 122.8° | 126.7° |
N15 | C14 | C16 | 123.1° | 126.7° |
C14 | C16 | C17 | 119.6° | 120.9° |
C14 | C16 | C21 | 121.2° | 120.9° |
C17 | C16 | C21 | 119.2° | 118.3° |
C16 | C17 | C18 | 117.8° | 118.9° |
C16 | C17 | H17 | 121.1° | 120.6° |
C16 | C21 | C20 | 117.9° | 119.2° |
C16 | C21 | H21 | 121.1° | 120.4° |
C18 | C17 | H17 | 121.1° | 120.5° |
C17 | C18 | C22 | 116.8° | 119.6° |
C17 | C18 | N19 | 125.4° | 120.6° |
C22 | C18 | N19 | 117.8° | 119.7° |
C18 | C22 | O26 | 119.2° | 120.0° |
C18 | C22 | N23 | 115.3° | 120.0° |
C18 | N19 | C20 | 114.6° | 121.9° |
N19 | C20 | C21 | 125.1° | 121.1° |
N19 | C20 | H20 | 117.4° | 119.5° |
C21 | C20 | H20 | 117.5° | 119.5° |
C20 | C21 | H21 | 121.1° | 120.4° |
O26 | C22 | N23 | 125.4° | 120.0° |
C22 | N23 | C24 | 120.2° | 120.0° |
C22 | N23 | HN23 | 119.9° | 120.0° |
C24 | N23 | HN23 | 119.9° | 120.0° |
N23 | C24 | C25 | 115.6° | 109.4° |
N23 | C24 | H24 | 107.5° | 109.4° |
N23 | C24 | H24A | 107.5° | 109.4° |
C25 | C24 | H24 | 107.5° | 109.5° |
C25 | C24 | H24A | 107.5° | 109.5° |
C24 | C25 | C31 | 118.2° | 120.0° |
C24 | C25 | C27 | 123.3° | 120.0° |
H24 | C24 | H24A | 111.4° | 109.5° |
C31 | C25 | C27 | 118.5° | 120.0° |
C25 | C31 | C30 | 120.1° | 120.0° |
C25 | C31 | H31 | 119.9° | 120.0° |
C25 | C27 | C28 | 121.4° | 120.0° |
C25 | C27 | H27 | 119.3° | 120.0° |
C28 | C27 | H27 | 119.3° | 120.0° |
C27 | C28 | C29 | 120.2° | 120.0° |
C27 | C28 | H28 | 119.9° | 120.0° |
C29 | C28 | H28 | 119.9° | 120.0° |
C28 | C29 | C30 | 118.0° | 120.0° |
C28 | C29 | H29 | 121.0° | 120.0° |
C30 | C29 | H29 | 121.0° | 120.0° |
C29 | C30 | C31 | 121.9° | 119.9° |
C29 | C30 | F32 | 119.9° | 120.0° |
C31 | C30 | F32 | 118.3° | 120.0° |
C30 | C31 | H31 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C6 | C1 | C2 | H1 | 180.0° | 179.7° |
C6 | C1 | C2 | C3 | 0.1° | 0.3° |
C6 | C1 | C2 | C7 | 179.9° | 179.8° |
C1 | C6 | C5 | C4 | 0.0° | 0.7° |
C1 | C6 | C5 | C10 | 179.9° | 179.7° |
C1 | C6 | C5 | H6 | 180.0° | 179.4° |
C1 | C2 | C3 | C7 | 179.9° | 179.9° |
C1 | C2 | C3 | C4 | 0.1° | 0.1° |
C1 | C2 | C3 | H3 | 179.9° | 180.0° |
C2 | C1 | C6 | C5 | 0.0° | 0.6° |
C2 | C1 | C6 | H6 | 180.0° | 180.0° |
C1 | C2 | C7 | O8 | 32.3° | 0.0° |
C1 | C2 | C7 | O9 | 148.3° | 179.9° |
H1 | C1 | C2 | C3 | 179.9° | 180.0° |
H1 | C1 | C2 | C7 | 0.1° | 0.1° |
H1 | C1 | C6 | C5 | 180.0° | 179.7° |
H1 | C1 | C6 | H6 | 0.0° | 0.3° |
C2 | C3 | C4 | H3 | 180.0° | 179.9° |
C2 | C3 | C4 | C5 | 0.1° | 0.1° |
C2 | C3 | C4 | H4 | 179.9° | 180.0° |
C3 | C2 | C7 | O8 | 147.9° | 179.9° |
C3 | C2 | C7 | O9 | 31.5° | 0.1° |
C7 | C2 | C3 | C4 | 180.0° | 180.0° |
C7 | C2 | C3 | H3 | 0.1° | 0.1° |
C2 | C7 | O8 | O9 | 179.3° | 180.0° |
C2 | C7 | O9 | HO9 | 179.3° | 180.0° |
C3 | C4 | C5 | H4 | 180.0° | 179.8° |
C3 | C4 | C5 | C10 | 179.9° | 179.9° |
C3 | C4 | C5 | C6 | 0.0° | 0.4° |
H3 | C3 | C4 | C5 | 179.9° | 179.9° |
H3 | C3 | C4 | H4 | 0.1° | 0.1° |
C4 | C5 | C10 | C6 | 179.9° | 179.6° |
C4 | C5 | C6 | H6 | 180.0° | 179.9° |
C4 | C5 | C10 | N11 | 168.5° | 90.0° |
C4 | C5 | C10 | H10 | 48.5° | 150.1° |
C4 | C5 | C10 | H10A | 71.5° | 30.1° |
H4 | C4 | C5 | C10 | 0.1° | 0.1° |
H4 | C4 | C5 | C6 | 179.9° | 179.7° |
C10 | C5 | C6 | H6 | 0.1° | 0.3° |
C5 | C10 | N11 | H10 | 120.0° | 119.9° |
C5 | C10 | N11 | H10A | 120.0° | 120.1° |
C5 | C10 | H10 | H10A | 119.3° | 120.0° |
C5 | C10 | N11 | N12 | 84.8° | 89.7° |
C5 | C10 | N11 | N15 | 94.2° | 90.0° |
C6 | C5 | C10 | N11 | 11.6° | 89.7° |
C6 | C5 | C10 | H10 | 131.7° | 30.3° |
C6 | C5 | C10 | H10A | 108.4° | 150.3° |
O8 | C7 | O9 | HO9 | 0.0° | 0.1° |
N11 | C10 | H10 | H10A | 119.3° | 120.0° |
C10 | N11 | N12 | N15 | 179.0° | 179.7° |
C10 | N11 | N12 | N13 | 179.4° | 179.9° |
C10 | N11 | N15 | C14 | 179.5° | 179.9° |
H10 | C10 | N11 | N12 | 155.2° | 150.4° |
H10 | C10 | N11 | N15 | 25.8° | 30.0° |
H10A | C10 | N11 | N12 | 35.2° | 30.3° |
H10A | C10 | N11 | N15 | 145.8° | 150.0° |
N11 | N12 | N13 | C14 | 0.1° | 0.0° |
N12 | N11 | N15 | C14 | 0.5° | 0.4° |
N15 | N11 | N12 | N13 | 0.4° | 0.2° |
N11 | N15 | C14 | N13 | 0.4° | 0.4° |
N11 | N15 | C14 | C16 | 178.4° | 179.8° |
N12 | N13 | C14 | N15 | 0.2° | 0.3° |
N12 | N13 | C14 | C16 | 178.2° | 180.0° |
N13 | C14 | N15 | C16 | 178.0° | 179.8° |
N13 | C14 | C16 | C17 | 18.0° | 0.0° |
N13 | C14 | C16 | C21 | 164.0° | 179.7° |
N15 | C14 | C16 | C17 | 159.9° | 179.7° |
N15 | C14 | C16 | C21 | 18.2° | 0.0° |
C14 | C16 | C17 | C21 | 178.1° | 179.7° |
C14 | C16 | C17 | C18 | 178.4° | 180.0° |
C14 | C16 | C17 | H17 | 1.6° | 0.0° |
C14 | C16 | C21 | C20 | 178.1° | 179.7° |
C14 | C16 | C21 | H21 | 1.9° | 0.0° |
C16 | C17 | C18 | H17 | 180.0° | 180.0° |
C16 | C17 | C18 | C22 | 179.2° | 180.0° |
C16 | C17 | C18 | N19 | 0.7° | 0.1° |
C17 | C16 | C21 | C20 | 0.1° | 0.6° |
C17 | C16 | C21 | H21 | 179.9° | 179.7° |
C21 | C16 | C17 | C18 | 0.3° | 0.3° |
C21 | C16 | C17 | H17 | 179.7° | 179.7° |
C16 | C21 | C20 | N19 | 0.2° | 0.6° |
C16 | C21 | C20 | H21 | 180.0° | 179.7° |
C16 | C21 | C20 | H20 | 179.8° | 179.7° |
C17 | C18 | C22 | N19 | 178.7° | 179.9° |
C17 | C18 | N19 | C20 | 0.7° | 0.0° |
C17 | C18 | C22 | O26 | 10.4° | 0.0° |
C17 | C18 | C22 | N23 | 167.1° | 180.0° |
H17 | C17 | C18 | C22 | 0.8° | 0.0° |
H17 | C17 | C18 | N19 | 179.3° | 180.0° |
C22 | C18 | N19 | C20 | 179.2° | 180.0° |
C18 | C22 | O26 | N23 | 177.2° | 180.0° |
C18 | C22 | N23 | C24 | 176.6° | 180.0° |
C18 | C22 | N23 | HN23 | 3.4° | 0.0° |
C18 | N19 | C20 | C21 | 0.4° | 0.3° |
C18 | N19 | C20 | H20 | 179.6° | 180.0° |
N19 | C18 | C22 | O26 | 170.9° | 180.0° |
N19 | C18 | C22 | N23 | 11.6° | 0.0° |
N19 | C20 | C21 | H20 | 180.0° | 179.7° |
N19 | C20 | C21 | H21 | 179.9° | 179.7° |
H20 | C20 | C21 | H21 | 0.1° | 0.0° |
O26 | C22 | N23 | C24 | 0.7° | 0.0° |
O26 | C22 | N23 | HN23 | 179.2° | 180.0° |
C22 | N23 | C24 | HN23 | 180.0° | 180.0° |
C22 | N23 | C24 | C25 | 73.1° | 180.0° |
C22 | N23 | C24 | H24 | 166.9° | 60.0° |
C22 | N23 | C24 | H24A | 46.9° | 60.0° |
N23 | C24 | C25 | H24 | 120.0° | 120.0° |
N23 | C24 | C25 | H24A | 120.0° | 120.0° |
N23 | C24 | H24 | H24A | 117.5° | 119.9° |
N23 | C24 | C25 | C31 | 176.0° | 90.0° |
N23 | C24 | C25 | C27 | 4.1° | 89.8° |
HN23 | N23 | C24 | C25 | 106.9° | 0.0° |
HN23 | N23 | C24 | H24 | 13.1° | 120.0° |
HN23 | N23 | C24 | H24A | 133.1° | 120.0° |
C25 | C24 | H24 | H24A | 117.5° | 120.1° |
C24 | C25 | C31 | C27 | 179.9° | 179.8° |
C24 | C25 | C27 | C28 | 179.8° | 180.0° |
C24 | C25 | C27 | H27 | 0.2° | 0.0° |
C24 | C25 | C31 | C30 | 179.6° | 179.7° |
C24 | C25 | C31 | H31 | 0.4° | 0.0° |
H24 | C24 | C25 | C31 | 56.0° | 29.9° |
H24 | C24 | C25 | C27 | 124.1° | 150.3° |
H24A | C24 | C25 | C31 | 64.0° | 150.0° |
H24A | C24 | C25 | C27 | 115.9° | 30.2° |
C31 | C25 | C27 | C28 | 0.1° | 0.2° |
C31 | C25 | C27 | H27 | 179.9° | 179.8° |
C25 | C31 | C30 | C29 | 0.3° | 0.6° |
C25 | C31 | C30 | H31 | 180.0° | 179.7° |
C25 | C31 | C30 | F32 | 180.0° | 179.7° |
C25 | C27 | C28 | H27 | 180.0° | 180.0° |
C25 | C27 | C28 | C29 | 0.1° | 0.0° |
C25 | C27 | C28 | H28 | 179.9° | 180.0° |
C27 | C25 | C31 | C30 | 0.3° | 0.5° |
C27 | C25 | C31 | H31 | 179.7° | 179.8° |
C27 | C28 | C29 | H28 | 180.0° | 180.0° |
C27 | C28 | C29 | C30 | 0.1° | 0.0° |
C27 | C28 | C29 | H29 | 179.9° | 180.0° |
H27 | C27 | C28 | C29 | 179.9° | 180.0° |
H27 | C27 | C28 | H28 | 0.1° | 0.1° |
C28 | C29 | C30 | H29 | 180.0° | 179.9° |
C28 | C29 | C30 | C31 | 0.1° | 0.3° |
C28 | C29 | C30 | F32 | 179.8° | 179.9° |
H28 | C28 | C29 | C30 | 180.0° | 180.0° |
H28 | C28 | C29 | H29 | 0.1° | 0.1° |
C29 | C30 | C31 | F32 | 179.6° | 179.8° |
C29 | C30 | C31 | H31 | 179.7° | 179.7° |
H29 | C29 | C30 | C31 | 179.9° | 179.8° |
H29 | C29 | C30 | F32 | 0.2° | 0.0° |
F32 | C30 | C31 | H31 | 0.0° | 0.0° |