Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3B8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C6doub1.38Å1.41ÅAromatic
C5C4sing1.39Å1.42ÅAromatic
C6C1sing1.39Å1.41ÅAromatic
C3C2sing1.39Å1.42ÅAromatic
C3C4doub1.38Å1.41ÅAromatic
C2C1doub1.40Å1.43ÅAromatic
C2C8sing1.48Å1.50Å
C1O7sing1.35Å1.38Å
O11C20doub1.22Å1.23Å
C4F9sing1.35Å1.34Å
O7C17sing1.35Å1.39Å
C8O10doub1.22Å1.24Å
C8C16sing1.48Å1.49Å
N12C20sing1.35Å1.37Å
C13C14doub1.41Å1.43ÅAromatic
C13N18sing1.32Å1.37ÅAromatic
C13N19sing1.38Å1.38Å
C14C15sing1.40Å1.44ÅAromatic
C14C20sing1.47Å1.50Å
C15C16doub1.39Å1.43ÅAromatic
C16C17sing1.41Å1.41ÅAromatic
C17N18doub1.33Å1.37ÅAromatic
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
N12HN12sing0.97Å1.00Å
N12HN1Asing0.97Å1.00Å
C15H15sing1.08Å1.08Å
N19HN19sing0.97Å1.00Å
N19HN1Bsing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C5C4120.2°120.8°
C5C6C1119.6°120.2°
C6C5H5119.9°119.6°
C5C6H6120.2°119.9°
C5C4C3121.2°120.0°
C5C4F9119.3°120.0°
C4C5H5119.9°119.6°
C6C1C2119.9°118.9°
C6C1O7116.7°120.0°
C1C6H6120.2°119.9°
C2C3C4118.6°119.5°
C3C2C1120.4°120.6°
C3C2C8121.3°121.0°
C2C3H3120.7°120.3°
C3C4F9119.5°120.0°
C4C3H3120.7°120.2°
C1C2C8118.2°118.4°
C2C1O7123.4°121.1°
C2C8O10121.6°122.1°
C2C8C16116.6°115.8°
C1O7C17119.2°122.2°
O11C20N12120.2°120.0°
O11C20C14120.9°120.0°
O7C17C16124.1°120.8°
O7C17N18113.3°119.6°
O10C8C16121.8°122.1°
C8C16C15123.4°121.1°
C8C16C17118.4°118.6°
N12C20C14118.9°120.0°
C20N12HN12111.6°120.0°
C20N12HN1A124.2°120.0°
C14C13N18122.2°121.2°
C14C13N19124.1°119.3°
C13C14C15117.5°118.8°
C13C14C20123.7°120.6°
N18C13N19113.6°119.4°
C13N18C17119.6°122.1°
C13N19HN19109.5°120.0°
C13N19HN1B109.5°119.9°
C15C14C20118.8°120.6°
C14C15C16119.9°117.9°
C14C15H15120.1°121.0°
C15C16C17118.2°120.4°
C16C15H15120.0°121.0°
C16C17N18122.6°119.6°
HN12N12HN1A124.2°120.0°
HN19N19HN1B109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C5C4H5180.0°179.8°
C5C6C1H6180.0°180.0°
C6C5C4C30.2°0.2°
C5C6C1C20.3°0.2°
C5C6C1O7179.4°179.4°
C6C5C4F9179.7°179.8°
C4C5C6C10.1°0.0°
C5C4C3C20.3°0.0°
C5C4C3F9179.9°180.0°
C4C5C6H6179.9°180.0°
C5C4C3H3179.7°180.0°
C6C1C2C30.2°0.4°
C6C1C2O7179.7°179.7°
C6C1C2C8179.9°179.2°
C6C1O7C17179.5°164.1°
C1C6C5H5179.9°179.7°
C2C3C4H3180.0°180.0°
C3C2C1C8179.7°179.6°
C3C2C1O7179.5°179.3°
C2C3C4F9179.6°180.0°
C3C2C8O100.3°13.1°
C3C2C8C16179.3°167.0°
C4C3C2C10.1°0.3°
C4C3C2C8179.6°179.3°
C3C4C5H5179.8°179.6°
C2C1O7C170.2°16.3°
C1C2C8O10180.0°167.3°
C1C2C8C160.4°12.6°
C2C1C6H6179.7°179.7°
C1C2C3H3179.9°179.7°
C8C2C1O70.2°1.1°
C2C8O10C16179.6°179.9°
C2C8C16C15179.6°167.1°
C2C8C16C170.3°12.7°
C8C2C3H30.4°0.7°
C1O7C17C160.4°16.1°
C1O7C17N18179.4°164.0°
O7C1C6H60.6°0.6°
O11C20N12C14179.2°180.0°
O11C20C14C1312.0°6.0°
O11C20C14C15167.8°174.1°
O11C20N12HN12180.0°0.0°
O11C20N12HN1A0.0°179.9°
F9C4C5H50.3°0.4°
F9C4C3H30.4°0.0°
O7C17C16C80.1°1.0°
O7C17N18C13179.8°179.4°
O7C17C16C15180.0°179.2°
O7C17C16N18179.7°179.9°
O10C8C16C150.0°13.0°
O10C8C16C17179.8°167.2°
C8C16C15C14179.7°179.4°
C8C16C15C17179.8°179.8°
C8C16C17N18179.6°179.2°
C8C16C15H150.3°0.5°
N12C20C14C13168.8°174.0°
N12C20C14C1511.4°5.9°
C20N12HN12HN1A180.0°179.9°
C14C13N18N19179.9°180.0°
C13C14C15C20179.8°179.9°
C13C14C15C160.0°0.1°
C14C13N18C170.2°0.0°
C13C14C15H15180.0°179.9°
C14C13N19HN19127.9°5.7°
C14C13N19HN1B112.1°174.3°
N18C13C14C150.2°0.3°
N18C13C14C20179.5°179.6°
C13N18C17C160.1°0.5°
N18C13N19HN1952.2°174.2°
N18C13N19HN1B67.8°5.7°
N19C13C14C15179.9°179.6°
N19C13C14C200.3°0.4°
N19C13N18C17179.9°179.9°
C13N19HN19HN1B120.0°179.9°
C14C15C16H15180.0°180.0°
C14C15C16C170.2°0.4°
C20C14C15C16179.7°179.8°
C14C20N12HN120.8°180.0°
C14C20N12HN1A179.2°0.1°
C20C14C15H150.3°0.2°
C15C16C17N180.3°0.7°
C17C16C15H15179.8°179.6°
H5C5C6H60.1°0.3°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon