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SummaryGeometryRelated PDB entries

38C

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAXOAWsing1.43Å1.43Å
OAACABdoub1.21Å1.25Å
OBACABsing1.35Å1.25Å
CABCACsing1.48Å1.50Å
OAWCAVsing1.36Å1.38Å
CAUCAVdoub1.39Å1.39ÅAromatic
CAUCATsing1.38Å1.40ÅAromatic
CAVCAYsing1.39Å1.40ÅAromatic
CATCASdoub1.38Å1.40ÅAromatic
CACNADdoub1.32Å1.35ÅAromatic
CACCAPsing1.41Å1.40ÅAromatic
NADCAEsing1.33Å1.35ÅAromatic
CAYCAZdoub1.38Å1.40ÅAromatic
CASCAZsing1.38Å1.40ÅAromatic
CASCARsing1.51Å1.49Å
NAQCAPsing1.38Å1.36Å
NAQCARsing1.47Å1.33Å
CAPNAOdoub1.32Å1.36ÅAromatic
CAECAFdoub1.41Å1.39ÅAromatic
CAECANsing1.46Å1.40ÅAromatic
CAFCAGsing1.36Å1.39ÅAromatic
NAOCANsing1.34Å1.36ÅAromatic
CANCAMdoub1.40Å1.39ÅAromatic
CAGCAHdoub1.39Å1.39ÅAromatic
CAMCAHsing1.36Å1.40ÅAromatic
CAHCAIsing1.51Å1.50Å
FALCAIsing1.40Å1.32Å
CAIFAKsing1.40Å1.32Å
CAIFAJsing1.40Å1.32Å
CAGH1sing1.08Å1.08Å
CAFH2sing1.08Å1.08Å
CAMH3sing1.08Å1.08Å
CARH5sing1.09Å1.10Å
CAZH6sing1.08Å1.08Å
CAYH7sing1.08Å1.08Å
CAXH8sing1.09Å1.10Å
CAXH9sing1.09Å1.10Å
CAXH10sing1.09Å1.10Å
CAUH11sing1.08Å1.08Å
CATH12sing1.08Å1.08Å
NAQH13sing0.97Å1.00Å
CARH14sing1.09Å1.10Å
OBAH15sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAXOAWCAV121.3°117.0°
OAWCAXH8109.5°109.4°
OAWCAXH9109.5°109.5°
OAWCAXH10109.5°109.4°
OAACABOBA121.4°120.0°
OAACABCAC118.6°120.0°
OBACABCAC119.9°120.0°
CABOBAH15109.5°117.0°
CABCACNAD117.3°119.4°
CABCACCAP122.5°119.4°
OAWCAVCAU119.7°120.1°
OAWCAVCAY120.6°120.0°
CAVCAUCAT119.8°120.0°
CAUCAVCAY119.7°119.9°
CAVCAUH11120.1°120.0°
CAUCATCAS120.8°120.1°
CATCAUH11120.1°120.0°
CAUCATH12119.6°120.0°
CAVCAYCAZ120.4°119.9°
CAVCAYH7119.8°120.1°
CATCASCAZ119.4°120.1°
CATCASCAR119.6°119.9°
CASCATH12119.6°120.0°
NADCACCAP120.2°121.1°
CACNADCAE120.7°119.6°
CACCAPNAQ119.6°119.5°
CACCAPNAO119.3°121.0°
NADCAECAF119.5°121.8°
NADCAECAN119.7°119.4°
CAYCAZCAS119.9°120.0°
CAYCAZH6120.0°120.0°
CAZCAYH7119.8°120.0°
CAZCASCAR121.0°119.9°
CASCAZH6120.1°120.0°
CASCARNAQ118.5°109.4°
CASCARH5107.2°109.4°
CASCARH14107.2°109.4°
CAPNAQCAR124.9°120.0°
NAQCAPNAO121.1°119.5°
CAPNAQH13105.5°120.0°
NAQCARH5107.2°109.5°
CARNAQH13105.5°120.0°
NAQCARH14107.2°109.5°
CAPNAOCAN120.4°119.5°
CAFCAECAN120.8°118.8°
CAECAFCAG119.5°119.5°
CAECAFH2120.2°120.2°
CAECANNAO119.8°119.4°
CAECANCAM119.3°118.9°
CAFCAGCAH120.2°121.6°
CAFCAGH1119.9°119.2°
CAGCAFH2120.3°120.2°
NAOCANCAM120.9°121.7°
CANCAMCAH120.0°119.5°
CANCAMH3120.0°120.3°
CAGCAHCAM120.1°121.7°
CAGCAHCAI119.1°119.2°
CAHCAGH1119.9°119.2°
CAMCAHCAI120.8°119.2°
CAHCAMH3120.0°120.2°
CAHCAIFAL109.3°109.5°
CAHCAIFAK110.4°109.5°
CAHCAIFAJ109.6°109.5°
FALCAIFAK108.5°109.4°
FALCAIFAJ109.6°109.5°
FAKCAIFAJ109.4°109.5°
H5CARH14109.5°109.5°
H8CAXH9109.5°109.5°
H8CAXH10109.5°109.5°
H9CAXH10109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAXOAWCAVCAU84.2°0.0°
CAXOAWCAVCAY96.0°180.0°
OAWCAXH8H9120.0°120.0°
OAWCAXH8H10120.0°119.9°
OAWCAXH9H10120.0°120.0°
OAACABOBACAC178.9°180.0°
OAACABCACNAD26.3°174.8°
OAACABCACCAP154.3°5.7°
OAACABOBAH150.0°0.0°
OBACABCACNAD152.7°5.1°
OBACABCACCAP26.8°174.3°
CABCACNADCAP179.5°179.4°
CABCACNADCAE179.5°180.0°
CABCACCAPNAQ1.2°0.3°
CABCACCAPNAO179.9°180.0°
CACCABOBAH15178.9°179.9°
OAWCAVCAUCAY179.7°180.0°
OAWCAVCAUCAT179.9°179.7°
OAWCAVCAYCAZ179.9°180.0°
OAWCAVCAYH70.1°0.1°
CAVOAWCAXH8180.0°60.0°
CAVOAWCAXH960.0°180.0°
CAVOAWCAXH1060.0°60.0°
OAWCAVCAUH110.1°0.0°
CAVCAUCATH11180.0°179.7°
CAVCAUCATCAS0.1°0.6°
CAUCAVCAYCAZ0.2°0.0°
CAUCAVCAYH7179.8°179.9°
CAVCAUCATH12179.9°180.0°
CATCAUCAVCAY0.2°0.3°
CAUCATCASH12180.0°179.4°
CAUCATCASCAZ0.1°0.6°
CAUCATCASCAR179.9°179.7°
CAVCAYCAZH7180.0°179.9°
CAVCAYCAZCAS0.2°0.0°
CAVCAYCAZH6179.9°180.0°
CAYCAVCAUH11179.9°180.0°
CATCASCAZCAY0.1°0.3°
CATCASCAZCAR179.9°179.7°
CATCASCARNAQ0.2°90.3°
CATCASCARH5121.1°149.7°
CATCASCAZH6179.9°179.7°
CASCATCAUH11179.9°179.7°
CATCASCARH14121.4°29.7°
NADCACCAPNAQ179.4°179.7°
NADCACCAPNAO0.5°0.6°
CACNADCAECAF180.0°179.9°
CACNADCAECAN0.2°0.3°
CAPCACNADCAE0.1°0.6°
CACCAPNAQNAO178.9°179.7°
CACCAPNAQCAR143.2°174.7°
CACCAPNAOCAN0.6°0.3°
CACCAPNAQH1321.1°5.2°
NADCAECAFCAN179.8°179.8°
NADCAECAFCAG179.9°180.0°
NADCAECANNAO0.1°0.0°
NADCAECANCAM179.7°180.0°
NADCAECAFH20.1°0.0°
CAYCAZCASH6180.0°180.0°
CAYCAZCASCAR180.0°180.0°
CAZCASCARNAQ180.0°90.0°
CAZCASCARH558.8°30.0°
CASCAZCAYH7179.8°179.9°
CAZCASCATH12179.9°180.0°
CAZCASCARH1458.7°150.0°
CASCARNAQCAP168.3°180.0°
CASCARNAQH5121.3°120.0°
CASCARNAQH14121.3°120.0°
CASCARH5H14116.0°120.0°
CARCASCAZH60.1°0.0°
CARCASCATH120.0°0.3°
CASCARNAQH1346.2°0.0°
CAPNAQCARH13122.1°179.9°
NAQCAPNAOCAN179.5°180.0°
CAPNAQCARH547.1°60.0°
CAPNAQCARH1470.4°60.1°
CARNAQCAPNAO37.9°5.5°
NAQCARH5H14115.9°120.1°
CAPNAOCANCAE0.3°0.0°
CAPNAOCANCAM179.9°180.0°
NAOCAPNAQH13160.0°174.5°
CAECAFCAGH2180.0°179.9°
CAFCAECANNAO179.8°179.8°
CAFCAECANCAM0.0°0.2°
CAECAFCAGCAH0.2°0.1°
CAECAFCAGH1179.8°180.0°
CANCAECAFCAG0.2°0.2°
CAECANNAOCAM179.8°180.0°
CAECANCAMCAH0.2°0.0°
CANCAECAFH2179.8°179.7°
CAECANCAMH3179.8°180.0°
CAFCAGCAHH1180.0°179.9°
CAFCAGCAHCAM0.0°0.4°
CAFCAGCAHCAI179.8°180.0°
NAOCANCAMCAH180.0°179.9°
NAOCANCAMH30.0°0.0°
CANCAMCAHCAG0.2°0.3°
CANCAMCAHH3180.0°180.0°
CANCAMCAHCAI179.6°180.0°
CAGCAHCAMCAI179.8°179.7°
CAGCAHCAIFAL39.8°120.0°
CAGCAHCAIFAK159.1°0.0°
CAGCAHCAIFAJ80.3°120.0°
CAHCAGCAFH2179.8°180.0°
CAGCAHCAMH3179.8°179.7°
CAMCAHCAIFAL139.9°59.7°
CAMCAHCAIFAK20.7°179.7°
CAMCAHCAIFAJ99.9°60.3°
CAMCAHCAGH1180.0°179.8°
CAHCAIFALFAK120.5°120.0°
CAHCAIFALFAJ120.1°120.0°
CAHCAIFAKFAJ120.7°120.0°
CAICAHCAGH10.2°0.1°
CAICAHCAMH30.4°0.0°
FALCAIFAKFAJ119.6°120.0°
H1CAGCAFH20.2°0.1°
H5CARNAQH1375.0°119.9°
H6CAZCAYH70.1°0.1°
H8CAXH9H10120.0°120.1°
H11CAUCATH120.1°0.3°
H13NAQCARH14167.5°120.0°

246704

PDB entries from 2025-12-24

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