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37P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2SSdoub1.42Å1.42Å
SO1Sdoub1.42Å1.42Å
SN45sing1.66Å1.64Å
SO5'sing1.52Å1.53Å
N45C44sing1.35Å1.33Å
O5'C5'sing1.43Å1.43Å
O3'C3'sing1.43Å1.42Å
C5'C4'sing1.53Å1.51Å
C3'C4'sing1.54Å1.53Å
C3'C2'sing1.55Å1.52Å
C44C43sing1.51Å1.51Å
C44O46doub1.21Å1.22Å
C4'O4'sing1.43Å1.46Å
C43C42sing1.53Å1.53Å
C42C16sing1.53Å1.53Å
C2'C1'sing1.55Å1.52Å
C2'O2'sing1.43Å1.41Å
C16C15sing1.53Å1.53Å
O4'C1'sing1.44Å1.41Å
C1'N9Asing1.46Å1.49Å
C4C3doub1.36Å1.39ÅAromatic
C4C11sing1.41Å1.39ÅAromatic
N10C11sing1.34Å1.35Å
N10C9doub1.32Å1.35Å
C14C9sing1.46Å1.39Å
C14C13doub1.35Å1.39Å
C15C13sing1.51Å1.51Å
C3C2sing1.40Å1.39ÅAromatic
C11C6doub1.42Å1.49ÅAromatic
C9C8sing1.47Å1.49Å
C13C12sing1.41Å1.49Å
N9AC8Asing1.36Å1.34ÅAromatic
N9AC4Asing1.37Å1.33ÅAromatic
C2O15sing1.36Å1.36Å
C2C1doub1.39Å1.39ÅAromatic
C6C1sing1.39Å1.39ÅAromatic
C6O7sing1.35Å1.37Å
C8O7sing1.35Å1.37Å
C8C17doub1.36Å1.39Å
C12C17sing1.40Å1.39Å
C12O16doub1.22Å1.25Å
C8AN7Adoub1.30Å1.36ÅAromatic
N3AC4Asing1.33Å1.35ÅAromatic
N3AC2Adoub1.32Å1.34ÅAromatic
C4AC5Adoub1.40Å1.47ÅAromatic
C2AN1Asing1.32Å1.34ÅAromatic
N7AC5Asing1.35Å1.34ÅAromatic
C5AC6Asing1.41Å1.48ÅAromatic
N1AC6Adoub1.33Å1.35ÅAromatic
C6AN6Asing1.38Å1.35Å
C5'H1sing1.09Å1.10Å
C5'H2sing1.09Å1.10Å
C4'H3sing1.09Å1.10Å
C3'H4sing1.09Å1.10Å
O3'H5sing0.97Å0.95Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
C1'H8sing1.09Å1.10Å
C2AH9sing1.08Å1.08Å
N6AH10sing0.97Å1.00Å
N6AH11sing0.97Å1.00Å
C8AH12sing1.08Å1.08Å
N45H13sing0.97Å1.00Å
C43H14sing1.09Å1.10Å
C43H15sing1.09Å1.10Å
C42H16sing1.09Å1.10Å
C42H17sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
C16H19sing1.09Å1.10Å
C15H20sing1.09Å1.10Å
C15H21sing1.09Å1.10Å
C17H22sing1.08Å1.08Å
C14H24sing1.08Å1.08Å
C1H26sing1.08Å1.08Å
O15H27sing0.97Å0.95Å
C3H28sing1.08Å1.08Å
C4H29sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2SSO1S117.9°123.2°
O2SSN45107.5°106.4°
O2SSO5'107.8°106.4°
O1SSN45108.0°106.4°
O1SSO5'106.8°106.4°
N45SO5'108.5°107.2°
SN45C44120.1°120.0°
SN45H13120.0°120.0°
SO5'C5'120.0°114.0°
N45C44C43117.3°120.0°
N45C44O46122.5°120.0°
C44N45H13119.9°120.0°
O5'C5'C4'112.3°109.5°
O5'C5'H1108.8°109.5°
O5'C5'H2108.7°109.4°
O3'C3'C4'109.9°110.9°
O3'C3'C2'108.5°110.9°
O3'C3'H4113.1°110.9°
C3'O3'H5109.5°114.0°
C5'C4'C3'115.8°109.8°
C5'C4'O4'109.1°109.8°
C4'C5'H1108.8°109.5°
C4'C5'H2108.8°109.5°
C5'C4'H3108.5°109.9°
C4'C3'C2'102.0°102.2°
C3'C4'O4'105.7°107.6°
C3'C4'H3108.2°109.9°
C4'C3'H4111.3°110.9°
C3'C2'C1'99.9°100.9°
C3'C2'O2'113.6°111.1°
C2'C3'H4111.5°110.8°
C3'C2'H6109.9°111.1°
C43C44O46120.2°120.0°
C44C43C42110.6°109.5°
C44C43H14109.2°109.5°
C44C43H15109.2°109.5°
C4'O4'C1'108.5°110.0°
O4'C4'H3109.3°109.9°
C43C42C16112.4°109.5°
C42C43H14109.2°109.5°
C42C43H15109.2°109.5°
C43C42H16108.8°109.4°
C43C42H17108.8°109.5°
C42C16C15111.1°109.4°
C16C42H16108.7°109.5°
C16C42H17108.7°109.5°
C42C16H18109.1°109.5°
C42C16H19109.1°109.5°
C1'C2'O2'111.6°111.1°
C2'C1'O4'104.5°105.2°
C2'C1'N9A114.3°110.3°
C1'C2'H6109.9°111.2°
C2'C1'H8106.8°110.3°
O2'C2'H6111.4°111.0°
C2'O2'H7109.5°114.0°
C16C15C13110.3°109.4°
C15C16H18109.1°109.5°
C15C16H19109.1°109.5°
C16C15H20109.3°109.5°
C16C15H21109.2°109.5°
O4'C1'N9A115.4°110.3°
O4'C1'H8108.2°110.4°
C1'N9AC8A126.9°126.3°
C1'N9AC4A124.6°126.3°
N9AC1'H8107.2°110.2°
C3C4C11119.8°120.0°
C4C3C2121.6°120.6°
C4C3H28119.2°119.6°
C3C4H29120.1°120.0°
C4C11N10120.9°119.8°
C4C11C6118.8°119.4°
C11C4H29120.1°120.0°
C11N10C9120.4°120.3°
N10C11C6120.3°120.8°
N10C9C14120.3°121.3°
N10C9C8120.2°119.9°
C9C14C13120.4°119.1°
C14C9C8119.6°118.8°
C9C14H24119.7°120.5°
C14C13C15120.2°119.5°
C14C13C12119.8°121.0°
C13C14H24119.8°120.4°
C15C13C12120.0°119.5°
C13C15H20109.2°109.5°
C13C15H21109.3°109.5°
C3C2O15119.5°119.8°
C3C2C1120.7°120.5°
C2C3H28119.2°119.7°
C11C6C1119.2°119.5°
C11C6O7120.0°120.5°
C9C8O7119.8°119.3°
C9C8C17120.1°119.4°
C13C12C17119.9°121.6°
C13C12O16120.3°119.2°
C8AN9AC4A108.4°107.4°
N9AC8AN7A110.9°110.0°
N9AC8AH12124.6°125.0°
N9AC4AN3A134.4°134.9°
N9AC4AC5A106.8°106.0°
O15C2C1119.8°119.8°
C2O15H27109.5°114.0°
C2C1C6120.0°120.0°
C2C1H26120.0°120.0°
C1C6O7120.9°119.9°
C6C1H26120.0°120.0°
C6O7C8119.5°119.2°
O7C8C17120.1°121.4°
C8C17C12120.2°120.2°
C8C17H22119.9°119.9°
C17C12O16119.8°119.2°
C12C17H22119.9°119.9°
C8AN7AC5A107.9°109.4°
N7AC8AH12124.6°125.0°
C4AN3AC2A120.8°120.6°
N3AC4AC5A118.8°119.1°
N3AC2AN1A123.9°122.5°
N3AC2AH9118.1°118.8°
C4AC5AN7A106.1°107.1°
C4AC5AC6A117.2°118.2°
C2AN1AC6A121.6°121.2°
N1AC2AH9118.0°118.7°
N7AC5AC6A136.8°134.7°
C5AC6AN1A117.8°118.5°
C5AC6AN6A122.2°120.8°
N1AC6AN6A120.1°120.7°
C6AN6AH10109.5°120.0°
C6AN6AH11109.5°120.0°
H1C5'H2109.5°109.4°
H10N6AH11109.5°120.0°
H14C43H15109.5°109.4°
H16C42H17109.5°109.5°
H18C16H19109.5°109.5°
H20C15H21109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2SSO1SN45122.0°123.0°
O2SSO1SO5'121.5°122.9°
O2SSN45O5'116.3°113.5°
O2SSN45C44177.4°48.5°
O2SSO5'C5'127.3°171.5°
O2SSN45H132.6°131.5°
O1SSN45O5'115.5°113.5°
O1SSN45C4454.4°178.5°
O1SSO5'C5'0.4°38.5°
O1SSN45H13125.6°1.4°
SN45C44H13180.0°180.0°
N45SO5'C5'116.6°75.0°
SN45C44C43151.2°180.0°
SN45C44O4628.8°0.0°
O5'SN45C4461.1°65.0°
SO5'C5'C4'169.4°180.0°
SO5'C5'H170.2°60.0°
SO5'C5'H249.0°60.0°
O5'SN45H13119.0°115.0°
N45C44C43O46180.0°180.0°
N45C44C43C4274.4°180.0°
N45C44C43H14165.5°60.0°
N45C44C43H1545.8°60.0°
O5'C5'C4'H1120.4°120.0°
O5'C5'C4'H2120.4°120.0°
O5'C5'C4'C3'39.0°175.4°
O5'C5'C4'O4'80.1°66.5°
O5'C5'H1H2118.7°119.9°
O5'C5'C4'H3160.9°54.4°
O3'C3'C4'C5'101.2°101.0°
O3'C3'C4'C2'114.9°118.2°
O3'C3'C4'H4126.0°123.7°
O3'C3'C2'H4125.1°123.6°
O3'C3'C4'O4'137.8°139.6°
O3'C3'C2'C1'155.1°152.3°
O3'C3'C2'O2'36.1°34.4°
O3'C3'C4'H320.8°20.0°
O3'C3'C2'H689.5°89.7°
C5'C4'C3'O4'121.0°119.5°
C5'C4'C3'H3122.1°120.9°
C5'C4'C3'C2'143.8°140.8°
C5'C4'O4'H3118.5°120.9°
C5'C4'O4'C1'120.9°117.8°
C4'C5'H1H2118.7°120.0°
C5'C4'C3'H424.8°22.7°
C4'C3'C2'H4118.9°118.2°
C3'C4'O4'H3116.3°119.6°
C4'C3'C2'C1'39.1°34.1°
C4'C3'C2'O2'79.9°83.8°
C3'C4'O4'C1'4.3°1.7°
C3'C4'C5'H181.4°64.6°
C3'C4'C5'H2159.4°55.4°
C4'C3'O3'H5180.0°180.0°
C4'C3'C2'H6154.5°152.1°
C2'C3'C4'O4'22.9°21.3°
C3'C2'C1'O2'120.4°117.8°
C3'C2'C1'H6115.4°117.9°
C3'C2'O2'H6124.8°124.2°
C3'C2'C1'O4'43.3°36.4°
C3'C2'C1'N9A170.4°155.3°
C2'C3'C4'H394.1°98.2°
C2'C3'O3'H569.2°67.1°
C3'C2'O2'H7180.0°61.5°
C3'C2'C1'H871.2°82.6°
C44C43C42H14120.2°120.0°
C44C43C42H15120.2°120.0°
C44C43C42C16154.4°180.0°
C43C44N45H1328.7°0.1°
C44C43H14H15119.5°120.0°
C44C43C42H1685.2°60.0°
C44C43C42H1734.0°60.0°
O46C44C43C42105.6°0.0°
O46C44N45H13151.3°180.0°
O46C44C43H1414.5°120.0°
O46C44C43H15134.2°120.0°
C4'O4'C1'C2'30.0°24.4°
C4'O4'C1'N9A156.4°143.3°
O4'C4'C5'H1159.5°53.5°
O4'C4'C5'H240.3°173.5°
O4'C4'C3'H496.2°96.8°
C4'O4'C1'H883.5°94.6°
C43C42C16H16120.4°119.9°
C43C42C16H17120.4°120.0°
C43C42C16C15134.5°180.0°
C42C43H14H15119.5°120.0°
C43C42H16H17118.7°120.0°
C43C42C16H1814.3°60.0°
C43C42C16H19105.2°60.0°
C42C16C15H18120.2°120.0°
C42C16C15H19120.3°120.0°
C42C16C15C13147.6°180.0°
C16C42C43H1434.2°60.0°
C16C42C43H1585.4°60.0°
C16C42H16H17118.7°120.1°
C42C16H18H19119.3°120.0°
C42C16C15H2027.5°60.0°
C42C16C15H2192.2°60.0°
C1'C2'O2'H6123.3°124.3°
C2'C1'O4'N9A126.3°119.0°
C2'C1'O4'H8113.6°118.9°
C2'C1'N9AH8118.2°122.0°
C2'C1'N9AC8A10.0°95.0°
C2'C1'N9AC4A173.3°84.7°
C1'C2'C3'H479.8°84.1°
C1'C2'O2'H768.0°173.0°
O2'C2'C1'O4'77.1°81.5°
O2'C2'C1'N9A49.9°37.5°
O2'C2'C3'H4161.3°158.0°
O2'C2'C1'H8168.4°159.5°
C16C15C13C147.0°94.8°
C16C15C13H20120.1°120.1°
C16C15C13H21120.1°120.0°
C16C15C13C12172.9°85.0°
C15C16C42H16105.0°60.0°
C15C16C42H1714.1°60.0°
C15C16H18H19119.2°120.0°
C16C15H20H21119.6°120.0°
O4'C1'N9AH8120.6°122.2°
O4'C1'N9AC8A131.2°20.8°
O4'C1'N9AC4A52.1°159.6°
C1'O4'C4'H3120.6°121.3°
O4'C1'C2'H6158.8°154.3°
C1'N9AC8AC4A177.1°179.7°
C1'N9AC8AN7A178.3°179.9°
C1'N9AC4AN3A2.5°0.1°
C1'N9AC4AC5A178.3°180.0°
N9AC1'C2'H674.2°86.7°
C1'N9AC8AH121.7°0.0°
C3C4C11H29180.0°179.9°
C3C4C11N10179.9°180.0°
C4C3C2H28180.0°180.0°
C3C4C11C60.0°0.1°
C4C3C2O15180.0°180.0°
C4C3C2C10.1°0.0°
C4C11N10C6179.9°180.0°
C4C11N10C9180.0°180.0°
C11C4C3C20.0°0.0°
C4C11C6C10.0°0.0°
C4C11C6O7179.9°180.0°
C11C4C3H28180.0°179.9°
C11N10C9C14180.0°179.7°
C11N10C9C80.2°0.0°
N10C11C6C1179.9°180.0°
N10C11C6O70.0°0.0°
N10C11C4H290.1°0.1°
N10C9C14C8179.8°179.7°
N10C9C14C13179.9°179.8°
C9N10C11C60.1°0.0°
N10C9C8O70.1°0.0°
N10C9C8C17179.9°180.0°
N10C9C14H240.1°0.3°
C9C14C13H24180.0°179.5°
C9C14C13C15179.9°179.8°
C9C14C13C120.0°0.4°
C14C9C8O7180.0°179.7°
C14C9C8C170.1°0.2°
C14C13C15C12179.9°179.8°
C13C14C9C80.1°0.5°
C14C13C12C170.0°0.2°
C14C13C12O16179.9°179.7°
C14C13C15H20127.1°25.3°
C14C13C15H21113.1°145.2°
C15C13C12C17179.9°180.0°
C15C13C12O160.2°0.1°
C13C15C16H1892.1°60.0°
C13C15C16H1927.4°60.0°
C13C15H20H21119.6°120.0°
C15C13C14H240.1°0.3°
C3C2O15C1179.9°180.0°
C3C2C1C60.1°0.1°
C3C2C1H26179.9°180.0°
C3C2O15H27180.0°90.0°
C2C3C4H29180.0°180.0°
C11C6C1C20.0°0.0°
C11C6C1O7179.9°180.0°
C11C6O7C80.0°0.1°
C11C6C1H26180.0°180.0°
C6C11C4H29180.0°180.0°
C9C8O7C60.1°0.0°
C9C8O7C17179.9°180.0°
C9C8C17C120.1°0.0°
C9C8C17H22179.9°179.9°
C8C9C14H24179.9°180.0°
C13C12C17C80.0°0.0°
C13C12C17O16179.9°179.9°
C12C13C15H2052.7°154.9°
C12C13C15H2167.0°35.0°
C13C12C17H22180.0°179.9°
C12C13C14H24180.0°180.0°
N9AC8AN7AH12180.0°179.9°
C8AN9AC4AN3A179.7°179.8°
C8AN9AC4AC5A1.1°0.2°
N9AC8AN7AC5A0.7°0.4°
C8AN9AC1'H8108.2°143.0°
C4AN9AC8AN7A1.1°0.4°
N9AC4AN3AC5A179.2°179.9°
N9AC4AN3AC2A179.1°180.0°
N9AC4AC5AN7A0.7°0.0°
N9AC4AC5AC6A179.3°180.0°
C4AN9AC1'H868.5°37.4°
C4AN9AC8AH12178.9°179.7°
O15C2C1C6180.0°180.0°
O15C2C1H260.0°0.0°
O15C2C3H280.0°0.0°
C2C1C6H26180.0°180.0°
C2C1C6O7180.0°179.9°
C1C2O15H270.1°90.0°
C1C2C3H28179.9°180.0°
C1C6O7C8179.9°180.0°
C6O7C8C17180.0°180.0°
O7C6C1H260.0°0.0°
O7C8C17C12180.0°180.0°
O7C8C17H220.0°0.0°
C8C17C12H22180.0°179.9°
C8C17C12O16180.0°179.9°
O16C12C17H220.1°0.0°
C8AN7AC5AC4A0.0°0.2°
C8AN7AC5AC6A180.0°179.8°
C4AN3AC2AN1A0.1°0.1°
N3AC4AC5AN7A179.9°180.0°
N3AC4AC5AC6A0.1°0.0°
C4AN3AC2AH9180.0°180.0°
C2AN3AC4AC5A0.1°0.1°
N3AC2AN1AH9180.0°179.9°
N3AC2AN1AC6A0.1°0.1°
C4AC5AN7AC6A180.0°180.0°
C4AC5AC6AN1A0.1°0.0°
C4AC5AC6AN6A179.8°180.0°
C2AN1AC6AC5A0.1°0.0°
C2AN1AC6AN6A179.8°179.9°
N7AC5AC6AN1A179.9°180.0°
N7AC5AC6AN6A0.2°0.0°
C5AN7AC8AH12179.3°179.7°
C5AC6AN1AN6A179.7°180.0°
C5AC6AN6AH10179.7°179.9°
C5AC6AN6AH1159.7°0.1°
C6AN1AC2AH9179.9°180.0°
N1AC6AN6AH100.0°0.1°
N1AC6AN6AH11120.0°180.0°
C6AN6AH10H11120.0°179.9°
H1C5'C4'H340.5°174.5°
H2C5'C4'H378.7°65.5°
H3C4'C3'H4146.8°143.7°
H4C3'O3'H555.0°56.4°
H4C3'C2'H635.7°33.9°
H6C2'O2'H755.2°62.7°
H6C2'C1'H844.2°35.3°
H14C43C42H16154.6°180.0°
H14C43C42H1786.2°60.0°
H15C43C42H1635.0°60.0°
H15C43C42H17154.1°180.0°
H16C42C16H18134.7°180.0°
H16C42C16H1915.2°59.9°
H17C42C16H18106.1°59.9°
H17C42C16H19134.3°180.0°
H18C16C15H20147.7°179.9°
H18C16C15H2128.0°60.0°
H19C16C15H2092.8°60.0°
H19C16C15H21147.5°180.0°
H28C3C4H290.0°0.0°

225946

PDB entries from 2024-10-09

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