Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

334

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.40Å1.41ÅAromatic
C1C6sing1.39Å1.42ÅAromatic
C1C7sing1.48Å1.42Å
C2C3sing1.36Å1.39ÅAromatic
C2HC2sing1.08Å1.07Å
C3C4doub1.39Å1.37ÅAromatic
C3HC3sing1.08Å1.08Å
C4C5sing1.41Å1.34ÅAromatic
C4N3sing1.38Å1.28ÅAromatic
C5C6doub1.40Å1.41ÅAromatic
C5N4sing1.36Å1.32ÅAromatic
C6HC6sing1.08Å1.08Å
C7N1sing1.33Å1.32Å
C7N2doub1.33Å1.32Å
N1HH11sing0.97Å1.01Å
N1HH12sing0.97Å1.00Å
N2HH21sing0.97Å1.01Å
N2HH22sing0.97Å1.00Å
N3C8sing1.37Å1.30ÅAromatic
N3HN3sing0.97Å0.98Å
N4C8doub1.31Å1.33ÅAromatic
C8C1'sing1.48Å1.42ÅAromatic
C1'C2'doub1.40Å1.40ÅAromatic
C1'C6'sing1.40Å1.42ÅAromatic
C2'C3'sing1.38Å1.41ÅAromatic
C2'HC2'sing1.08Å1.08Å
C3'CV'sing1.51Å1.54Å
C3'C4'doub1.38Å1.39ÅAromatic
CV'H32'sing1.09Å1.08Å
CV'H33'sing1.09Å1.08Å
CV'H34'sing1.09Å1.08Å
C4'C5'sing1.38Å1.40ÅAromatic
C4'HC4'sing1.08Å1.08Å
C5'C6'doub1.39Å1.40ÅAromatic
C5'BR5'sing1.89Å1.96Å
C6'O6'sing1.36Å1.38Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6118.3°120.2°
C2C1C7119.2°119.9°
C1C2C3121.3°120.5°
C1C2HC2120.9°119.8°
C6C1C7122.5°119.9°
C1C6C5118.7°119.5°
C1C6HC6121.3°120.3°
C1C7N1120.3°120.0°
C1C7N2119.5°120.0°
C3C2HC2117.8°119.8°
C2C3C4118.2°120.2°
C2C3HC3121.4°119.9°
C4C3HC3120.4°119.9°
C3C4C5123.5°120.1°
C3C4N3130.7°133.7°
C5C4N3105.8°106.2°
C4C5C6120.1°119.5°
C4C5N4112.2°107.2°
C4N3C8108.2°107.3°
C4N3HN3128.1°126.4°
C6C5N4127.8°133.3°
C5C6HC6120.0°120.2°
C5N4C8101.2°109.5°
N1C7N2120.3°120.0°
C7N1HH11118.6°120.0°
C7N1HH12125.8°120.0°
C7N2HH21120.1°120.0°
C7N2HH22123.3°120.1°
HH11N1HH12115.5°120.0°
HH21N2HH22116.6°120.0°
C8N3HN3123.7°126.4°
N3C8N4112.6°109.8°
N3C8C1'120.8°125.1°
N4C8C1'126.5°125.1°
C8C1'C2'121.3°120.2°
C8C1'C6'120.3°120.1°
C2'C1'C6'118.4°119.7°
C1'C2'C3'120.4°119.9°
C1'C2'HC2'120.0°120.0°
C1'C6'C5'121.2°119.7°
C1'C6'O6'120.8°120.2°
C3'C2'HC2'119.7°120.1°
C2'C3'CV'121.6°119.8°
C2'C3'C4'120.4°120.3°
CV'C3'C4'118.0°119.8°
C3'CV'H32'109.5°109.5°
C3'CV'H33'110.5°109.4°
C3'CV'H34'108.9°109.5°
C3'C4'C5'120.3°120.3°
C3'C4'HC4'119.2°119.9°
H32'CV'H33'109.2°109.4°
H32'CV'H34'109.2°109.5°
H33'CV'H34'109.5°109.5°
C5'C4'HC4'120.5°119.8°
C4'C5'C6'119.4°120.1°
C4'C5'BR5'120.9°119.9°
C6'C5'BR5'119.7°120.0°
C5'C6'O6'118.0°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6C7180.0°180.0°
C1C2C3HC2179.7°180.0°
C1C2C3C40.0°0.0°
C1C2C3HC3179.8°180.0°
C2C1C6C50.4°0.0°
C2C1C6HC6179.5°180.0°
C2C1C7N1178.9°0.0°
C2C1C7N21.1°180.0°
C6C1C2C30.4°0.0°
C6C1C2HC2179.9°179.9°
C1C6C5C40.1°0.0°
C1C6C5HC6179.9°180.0°
C1C6C5N4179.6°179.7°
C6C1C7N11.1°180.0°
C6C1C7N2179.0°0.0°
C7C1C2C3179.5°180.0°
C7C1C2HC20.2°0.0°
C7C1C6C5179.6°180.0°
C7C1C6HC60.5°0.0°
C1C7N1N2180.0°180.0°
C1C7N1HH111.7°0.0°
C1C7N1HH12179.9°180.0°
C1C7N2HH210.1°180.0°
C1C7N2HH22178.2°0.0°
C2C3C4HC3179.8°180.0°
C2C3C4C50.5°0.0°
C2C3C4N3179.8°179.9°
HC2C2C3C4179.7°179.9°
HC2C2C3HC30.5°0.1°
C3C4C5N3179.8°179.9°
C3C4C5C60.5°0.0°
C3C4C5N4179.9°179.7°
C3C4N3C8179.8°180.0°
C3C4N3HN30.1°0.1°
HC3C3C4C5179.3°180.0°
HC3C3C4N30.4°0.1°
C4C5C6N4179.5°179.7°
C4C5C6HC6180.0°180.0°
C5C4N3C80.0°0.0°
C5C4N3HN3179.8°180.0°
C4C5N4C80.1°0.4°
N3C4C5C6179.7°180.0°
N3C4C5N40.1°0.2°
C4N3C8HN3179.9°179.9°
C4N3C8N40.1°0.3°
C4N3C8C1'178.0°180.0°
C6C5N4C8179.7°179.9°
N4C5C6HC60.5°0.3°
C5N4C8N30.1°0.4°
C5N4C8C1'177.9°179.9°
C7N1HH11HH12178.6°179.9°
N1C7N2HH21179.9°0.0°
N1C7N2HH221.7°180.0°
N2C7N1HH11178.3°180.0°
N2C7N1HH120.1°0.0°
C7N2HH21HH22178.3°180.0°
N3C8N4C1'177.8°179.7°
N3C8C1'C2'170.1°139.7°
N3C8C1'C6'9.7°40.0°
HN3N3C8N4179.9°179.8°
HN3N3C8C1'2.1°0.1°
N4C8C1'C2'7.5°39.9°
N4C8C1'C6'172.7°140.3°
C8C1'C2'C6'179.8°179.7°
C8C1'C2'C3'179.9°179.8°
C8C1'C2'HC2'0.2°0.2°
C8C1'C6'C5'179.5°180.0°
C8C1'C6'O6'2.1°0.0°
C1'C2'C3'HC2'179.9°179.6°
C1'C2'C3'CV'180.0°179.8°
C1'C2'C3'C4'0.2°0.5°
C2'C1'C6'C5'0.3°0.3°
C2'C1'C6'O6'178.1°179.7°
C6'C1'C2'C3'0.0°0.5°
C6'C1'C2'HC2'180.0°179.9°
C1'C6'C5'C4'0.5°0.0°
C1'C6'C5'O6'178.5°180.0°
C1'C6'C5'BR5'177.2°180.0°
C2'C3'CV'C4'179.8°179.8°
C2'C3'CV'H32'128.1°90.2°
C2'C3'CV'H33'7.8°29.7°
C2'C3'CV'H34'112.5°149.7°
C2'C3'C4'C5'0.0°0.3°
C2'C3'C4'HC4'179.5°179.7°
HC2'C2'C3'CV'0.1°0.2°
HC2'C2'C3'C4'179.9°179.9°
C3'CV'H32'H33'121.1°120.0°
C3'CV'H32'H34'119.1°120.0°
C3'CV'H33'H34'120.0°120.0°
CV'C3'C4'C5'179.8°180.0°
CV'C3'C4'HC4'0.7°0.0°
C4'C3'CV'H32'52.1°90.0°
C4'C3'CV'H33'172.4°150.0°
C4'C3'CV'H34'67.3°30.0°
C3'C4'C5'HC4'179.5°180.0°
C3'C4'C5'C6'0.4°0.0°
C3'C4'C5'BR5'177.4°180.0°
H32'CV'H33'H34'119.6°120.0°
C4'C5'C6'BR5'177.8°180.0°
C4'C5'C6'O6'178.0°180.0°
HC4'C4'C5'C6'179.1°180.0°
HC4'C4'C5'BR5'3.1°0.0°
BR5'C5'C6'O6'4.3°0.0°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon