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31M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CEMSDMsing1.81Å1.78Å
SDMCGMsing1.81Å1.83Å
CGMCBMsing1.53Å1.53Å
CBMCAMsing1.53Å1.53Å
NMCAMsing1.47Å1.47Å
CAMCTMsing1.51Å1.54Å
CTMNsing1.35Å1.33Å
CTMOTMdoub1.21Å1.23Å
CE1CZdoub1.38Å1.39ÅAromatic
CE1CD1sing1.38Å1.39ÅAromatic
CZCE2sing1.38Å1.39ÅAromatic
NCAsing1.47Å1.49Å
CD1CGdoub1.38Å1.39ÅAromatic
CE2CD2doub1.38Å1.39ÅAromatic
CGCD2sing1.38Å1.39ÅAromatic
CGCBsing1.51Å1.39Å
CACBsing1.53Å1.53Å
CACsing1.51Å1.52Å
OCdoub1.21Å1.23Å
CN3'sing1.35Å1.35Å
N3'C3'sing1.47Å1.47Å
C3'C4'sing1.54Å1.52Å
C3'C2'sing1.55Å1.51Å
C5'O5'sing1.43Å1.42Å
C5'C4'sing1.53Å1.53Å
O5'Psing1.61Å1.60Å
C4'O4'sing1.44Å1.46Å
C2'O2'sing1.43Å1.44Å
C2'C1'sing1.55Å1.52Å
OP1Pdoub1.48Å1.48Å
OP2Psing1.61Å1.48Å
C8N7doub1.30Å1.32ÅAromatic
C8N9sing1.36Å1.32ÅAromatic
O4'C1'sing1.44Å1.45Å
N7C5sing1.35Å1.33ÅAromatic
C1'N9sing1.46Å1.50Å
N9C4sing1.37Å1.38ÅAromatic
C5C4doub1.41Å1.32ÅAromatic
C5C6sing1.40Å1.33ÅAromatic
C4N3sing1.33Å1.34ÅAromatic
N6C6sing1.38Å1.33Å
C6N1doub1.33Å1.31ÅAromatic
N3C2doub1.32Å1.31ÅAromatic
N1C2sing1.32Å1.38ÅAromatic
OP2HOP2sing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
N3'H3sing0.97Å1.00Å
C4'H4'sing1.09Å1.10Å
C5'H5`sing1.09Å1.10Å
C5'H5''sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
N6H61sing0.97Å1.00Å
N6H62sing0.97Å1.00Å
C2H2sing1.08Å1.08Å
CAHAsing1.09Å1.10Å
NHsing0.97Å1.00Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CD1HD1sing1.08Å1.08Å
CE1HE1sing1.08Å1.08Å
CZHZsing1.08Å1.08Å
CE2HE2sing1.08Å1.08Å
CD2HD2sing1.08Å1.08Å
CAMHAMsing1.09Å1.10Å
NMHNM2sing1.01Å1.00Å
NMHNM1sing1.01Å1.00Å
CBMHBM2sing1.09Å1.10Å
CBMHBM3sing1.09Å1.10Å
CGMHGM3sing1.09Å1.10Å
CGMHGM2sing1.09Å1.10Å
CEMHEM1sing1.09Å1.10Å
CEMHEM2sing1.09Å1.10Å
CEMHEM3sing1.09Å1.10Å
POP3sing1.61Å102.52Å
OP3HOP3sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CEMSDMCGM100.0°103.0°
SDMCEMHEM1109.5°109.5°
SDMCEMHEM2109.5°109.5°
SDMCEMHEM3109.5°109.5°
SDMCGMCBM112.2°109.5°
SDMCGMHGM3108.8°109.5°
SDMCGMHGM2108.8°109.5°
CGMCBMCAM109.7°109.5°
CGMCBMHBM2109.4°109.5°
CGMCBMHBM3109.4°109.5°
CBMCGMHGM3108.8°109.5°
CBMCGMHGM2108.8°109.5°
CBMCAMNM110.5°109.4°
CBMCAMCTM110.0°109.5°
CBMCAMHAM108.1°109.4°
CAMCBMHBM2109.4°109.4°
CAMCBMHBM3109.4°109.4°
NMCAMCTM111.2°109.5°
NMCAMHAM108.8°109.4°
CAMNMHNM2109.5°111.0°
CAMNMHNM1109.5°111.0°
CAMCTMN120.5°120.0°
CAMCTMOTM113.6°120.0°
CTMCAMHAM108.0°109.5°
NCTMOTM125.9°120.0°
CTMNCA122.3°120.0°
CTMNH118.8°120.0°
CZCE1CD1120.0°120.0°
CE1CZCE2120.0°120.0°
CZCE1HE1120.0°119.9°
CE1CZHZ120.0°120.0°
CE1CD1CG120.0°120.0°
CE1CD1HD1120.0°120.0°
CD1CE1HE1120.0°120.0°
CZCE2CD2120.0°120.0°
CE2CZHZ120.0°120.0°
CZCE2HE2120.0°120.0°
NCACB111.7°109.4°
NCAC112.2°109.5°
NCAHA109.1°109.4°
CANH118.8°120.0°
CD1CGCD2120.0°120.0°
CD1CGCB120.0°120.0°
CGCD1HD1120.0°120.0°
CE2CD2CG120.0°120.0°
CD2CE2HE2120.0°119.9°
CE2CD2HD2120.0°120.1°
CD2CGCB120.0°120.0°
CGCD2HD2120.0°120.0°
CGCBCA110.6°109.5°
CGCBHB2109.2°109.5°
CGCBHB3109.2°109.5°
CBCAC106.6°109.5°
CBCAHA108.5°109.5°
CACBHB2109.2°109.4°
CACBHB3109.2°109.5°
CACO120.2°120.0°
CACN3'115.0°120.0°
CCAHA108.6°109.5°
OCN3'124.8°120.0°
CN3'C3'121.5°120.0°
CN3'H3119.2°120.0°
N3'C3'C4'105.3°110.5°
N3'C3'C2'113.1°110.7°
N3'C3'H3'111.5°110.5°
C3'N3'H3119.2°120.0°
C4'C3'C2'104.8°104.2°
C3'C4'C5'108.3°109.9°
C3'C4'O4'107.9°107.3°
C4'C3'H3'110.8°110.5°
C3'C4'H4'110.0°109.9°
C3'C2'O2'109.8°110.9°
C3'C2'C1'104.2°102.1°
C3'C2'H2'110.5°110.9°
C2'C3'H3'110.9°110.4°
O5'C5'C4'110.3°109.5°
C5'O5'P119.1°123.0°
O5'C5'H5`109.3°109.4°
O5'C5'H5''109.2°109.5°
C5'C4'O4'109.8°109.9°
C5'C4'H4'109.9°110.0°
C4'C5'H5`109.3°109.5°
C4'C5'H5''109.3°109.5°
O5'POP1109.8°109.5°
O5'POP2108.7°109.5°
O5'POP373.3°109.5°
C4'O4'C1'108.7°106.9°
O4'C4'H4'110.9°109.8°
O2'C2'C1'110.0°110.9°
O2'C2'H2'111.7°110.8°
C2'O2'HO2'109.5°114.0°
C2'C1'O4'106.4°103.6°
C2'C1'N9112.1°110.7°
C2'C1'H1'109.4°110.6°
C1'C2'H2'110.4°110.9°
OP1POP2120.0°109.5°
OP1POP353.2°109.5°
POP2HOP2109.5°114.0°
OP2POP3172.6°109.4°
N7C8N9108.9°110.0°
C8N7C5109.0°109.5°
N7C8H8125.5°125.0°
C8N9C1'127.2°126.3°
C8N9C4106.3°107.4°
N9C8H8125.5°125.0°
O4'C1'N9108.9°110.6°
O4'C1'H1'110.3°110.6°
N7C5C4107.5°107.1°
N7C5C6132.8°134.7°
C1'N9C4126.4°126.2°
N9C1'H1'109.6°110.6°
N9C4C5108.3°106.0°
N9C4N3130.7°134.9°
C4C5C6119.8°118.2°
C5C4N3121.1°119.0°
C5C6N6119.3°120.8°
C5C6N1120.8°118.5°
C4N3C2119.1°120.6°
N6C6N1119.9°120.7°
C6N6H61109.5°120.1°
C6N6H62109.5°120.0°
C6N1C2119.1°121.2°
N3C2N1120.1°122.5°
N3C2H2119.9°118.8°
N1C2H2120.0°118.8°
H5`C5'H5''109.5°109.4°
H61N6H62109.5°120.0°
HB2CBHB3109.4°109.5°
HNM2NMHNM1109.4°111.0°
HBM2CBMHBM3109.5°109.5°
HGM3CGMHGM2109.5°109.4°
HEM1CEMHEM2109.5°109.4°
HEM1CEMHEM3109.5°109.5°
HEM2CEMHEM3109.5°109.5°
POP3HOP390.0°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CEMSDMCGMCBM46.6°180.0°
CEMSDMCGMHGM373.8°60.0°
CEMSDMCGMHGM2167.1°59.9°
SDMCEMHEM1HEM2120.0°120.0°
SDMCEMHEM1HEM3120.0°120.0°
SDMCEMHEM2HEM3120.0°120.0°
SDMCGMCBMHGM3120.4°120.0°
SDMCGMCBMHGM2120.4°120.0°
SDMCGMCBMCAM173.0°180.0°
SDMCGMCBMHBM252.9°60.0°
SDMCGMCBMHBM367.0°60.0°
SDMCGMHGM3HGM2118.7°120.0°
CGMSDMCEMHEM1180.0°180.0°
CGMSDMCEMHEM260.0°60.0°
CGMSDMCEMHEM360.0°60.0°
CGMCBMCAMHBM2120.0°120.0°
CGMCBMCAMHBM3120.1°120.0°
CGMCBMCAMNM151.1°65.0°
CGMCBMCAMCTM85.7°175.0°
CGMCBMCAMHAM32.0°54.9°
CGMCBMHBM2HBM3119.9°120.0°
CBMCGMHGM3HGM2118.7°120.0°
CBMCAMNMCTM122.5°120.0°
CBMCAMNMHAM118.6°119.9°
CBMCAMCTMHAM117.8°120.0°
CBMCAMCTMN168.4°80.1°
CBMCAMCTMOTM10.1°100.0°
CBMCAMNMHNM2180.0°176.1°
CBMCAMNMHNM160.0°60.1°
CAMCBMHBM2HBM3119.9°119.9°
CAMCBMCGMHGM366.6°60.0°
CAMCBMCGMHGM252.5°60.0°
NMCAMCTMHAM119.4°120.0°
NMCAMCTMN68.8°160.0°
NMCAMCTMOTM112.7°20.0°
CAMNMHNM2HNM1120.0°123.8°
NMCAMCBMHBM288.9°55.1°
NMCAMCBMHBM331.0°175.0°
CAMCTMNOTM178.3°179.9°
CAMCTMNCA167.1°180.0°
CAMCTMNH12.8°0.1°
CTMCAMNMHNM257.4°63.9°
CTMCAMNMHNM162.5°59.9°
CTMCAMCBMHBM234.3°65.0°
CTMCAMCBMHBM3154.2°55.0°
CTMNCAH180.0°179.9°
CTMNCACB151.9°85.0°
CTMNCAC88.4°155.0°
CTMNCAHA32.0°34.9°
NCTMCAMHAM50.6°39.9°
OTMCTMNCA14.6°0.1°
OTMCTMNH165.5°180.0°
OTMCTMCAMHAM127.9°140.0°
CZCE1CD1HE1180.0°179.9°
CE1CZCE2HZ180.0°180.0°
CZCE1CD1CG0.2°0.1°
CE1CZCE2CD20.1°0.0°
CZCE1CD1HD1179.8°180.0°
CE1CZCE2HE2180.0°180.0°
CD1CE1CZCE20.2°0.0°
CE1CD1CGHD1180.0°180.0°
CE1CD1CGCD20.1°0.1°
CE1CD1CGCB179.7°179.7°
CD1CE1CZHZ179.8°180.0°
CZCE2CD2HE2180.0°179.9°
CZCE2CD2CG0.1°0.0°
CE2CZCE1HE1179.8°180.0°
CZCE2CD2HD2179.9°179.8°
NCACBCG56.0°65.0°
NCACBC122.9°120.0°
NCACBHA120.3°119.9°
NCACHA120.7°120.0°
NCACO47.2°0.1°
NCACN3'134.1°180.0°
NCACBHB2176.2°55.0°
NCACBHB364.2°175.0°
CD1CGCD2CE20.1°0.0°
CD1CGCD2CB179.7°179.7°
CD1CGCBCA108.8°89.7°
CD1CGCBHB2131.1°150.3°
CD1CGCBHB311.4°30.3°
CGCD1CE1HE1179.8°180.0°
CD1CGCD2HD2179.9°179.8°
CE2CD2CGHD2180.0°179.8°
CE2CD2CGCB179.9°179.7°
CD2CE2CZHZ179.9°179.9°
CD2CGCBCA71.5°90.0°
CD2CGCBHB248.7°30.0°
CD2CGCBHB3168.3°150.0°
CD2CGCD1HD1179.9°180.0°
CGCD2CE2HE2179.9°180.0°
CGCBCAHB2120.2°120.0°
CGCBCAHB3120.2°120.0°
CGCBCAC178.9°175.0°
CGCBCAHA64.3°54.9°
CGCBHB2HB3119.5°120.0°
CBCGCD1HD10.3°0.3°
CBCGCD2HD20.2°0.1°
CBCACHA116.8°120.1°
CBCACO75.4°120.0°
CBCACN3'103.4°60.0°
CBCANH28.1°95.0°
CACBHB2HB3119.5°119.9°
CACON3'178.6°179.9°
CACN3'C3'170.6°179.9°
CACN3'H39.3°0.0°
CCANH91.6°25.0°
CCACBHB260.9°64.9°
CCACBHB358.8°55.0°
OCN3'C3'8.0°0.0°
OCN3'H3172.0°179.9°
OCCAHA167.9°119.9°
CN3'C3'H3180.0°179.9°
CN3'C3'C4'73.0°155.0°
CN3'C3'C2'173.1°90.1°
CN3'C3'H3'47.3°32.4°
N3'CCAHA13.4°60.0°
N3'C3'C4'C2'119.6°118.9°
N3'C3'C4'H3'120.7°122.6°
N3'C3'C2'H3'126.1°122.6°
N3'C3'C4'C5'107.1°119.7°
N3'C3'C4'O4'134.1°120.8°
N3'C3'C2'O2'22.0°20.3°
N3'C3'C2'C1'139.8°97.9°
N3'C3'C2'H2'101.6°143.9°
N3'C3'C4'H4'13.0°1.5°
C4'C3'C2'H3'119.7°118.6°
C3'C4'C5'O5'169.2°175.0°
C3'C4'C5'O4'117.6°117.9°
C3'C4'C5'H4'120.2°121.2°
C3'C4'O4'H4'120.6°119.4°
C4'C3'C2'O2'92.2°139.1°
C4'C3'C2'C1'25.6°20.9°
C3'C4'O4'C1'3.1°26.3°
C4'C3'C2'H2'144.2°97.3°
C4'C3'N3'H3107.0°25.1°
C3'C4'C5'H5`70.7°55.0°
C3'C4'C5'H5''49.1°64.9°
C2'C3'C4'C5'133.3°121.4°
C2'C3'C4'O4'14.5°1.9°
C3'C2'O2'C1'114.1°112.7°
C3'C2'O2'H2'123.0°123.7°
C3'C2'C1'H2'118.7°118.3°
C3'C2'C1'O4'28.1°37.0°
C3'C2'C1'N990.9°155.5°
C3'C2'C1'H1'147.3°81.6°
C3'C2'O2'HO2'180.0°174.2°
C2'C3'N3'H36.9°89.8°
C2'C3'C4'H4'106.6°117.4°
O5'C5'C4'H5`120.1°120.0°
O5'C5'C4'H5''120.1°120.1°
O5'C5'C4'O4'73.2°67.1°
C5'O5'POP123.4°55.0°
C5'O5'POP2156.4°65.0°
O5'C5'C4'H4'49.0°53.9°
O5'C5'H5`H5''119.6°119.9°
C5'O5'POP316.1°175.0°
C4'C5'O5'P119.8°180.0°
C5'C4'O4'H4'121.6°121.1°
C5'C4'O4'C1'114.7°145.8°
C5'C4'C3'H3'13.6°2.8°
C4'C5'H5`H5''119.7°120.0°
O5'POP1OP2126.9°120.0°
O5'POP1OP349.4°120.0°
O5'POP2OP3104.2°120.0°
O5'POP2HOP2127.5°60.0°
PO5'C5'H5`0.3°59.9°
PO5'C5'H5''120.1°59.9°
O5'POP3HOP390.0°179.9°
C4'O4'C1'C2'19.5°39.9°
C4'O4'C1'N9101.5°158.5°
C4'O4'C1'H1'138.1°78.7°
O4'C4'C3'H3'105.2°116.6°
O4'C4'C5'H5`46.9°172.9°
O4'C4'C5'H5''166.7°53.0°
O2'C2'C1'H2'123.6°123.6°
O2'C2'C1'O4'89.5°155.1°
O2'C2'C1'N9151.4°86.3°
O2'C2'C1'H1'29.6°36.6°
O2'C2'C3'H3'148.2°102.3°
C2'C1'N9C879.6°92.5°
C2'C1'O4'N9121.1°118.6°
C2'C1'O4'H1'118.6°118.6°
C2'C1'N9H1'121.7°122.9°
C2'C1'N9C4103.2°87.1°
C1'C2'O2'HO2'65.9°61.4°
C1'C2'C3'H3'94.1°139.5°
OP1POP2OP323.3°120.0°
OP1POP2HOP20.0°180.0°
OP1POP3HOP390.0°59.9°
OP2POP3HOP390.0°60.1°
N7C8N9H8180.0°180.0°
N7C8N9C1'179.1°179.9°
N7C8N9C41.5°0.3°
C8N7C5C40.2°0.3°
C8N7C5C6179.7°180.0°
C8N9C1'O4'37.9°21.8°
N9C8N7C51.1°0.0°
C8N9C1'C4177.2°179.6°
C8N9C4C51.3°0.4°
C8N9C4N3179.6°179.7°
C8N9C1'H1'158.8°144.6°
O4'C1'N9H1'120.8°122.9°
O4'C1'N9C4139.3°158.6°
O4'C1'C2'H2'146.8°81.3°
C1'O4'C4'H4'123.7°93.1°
N7C5C4N90.7°0.4°
N7C5C4C6180.0°179.8°
N7C5C4N3179.9°179.7°
N7C5C6N60.2°0.0°
N7C5C6N1179.8°179.2°
C5N7C8H8178.9°180.0°
C1'N9C4C5179.0°179.9°
C1'N9C4N31.9°0.1°
N9C1'C2'H2'27.8°37.3°
C1'N9C8H80.9°0.1°
N9C4C5N3179.2°179.9°
N9C4C5C6179.4°179.8°
N9C4N3C2179.2°180.0°
C4N9C1'H1'18.5°35.8°
C4N9C8H8178.5°179.7°
C4C5C6N6179.8°179.8°
C4C5C6N10.2°0.5°
C5C4N3C20.2°0.1°
C6C5C4N30.2°0.1°
C5C6N6N1179.6°179.2°
C5C6N1C20.3°0.7°
C5C6N6H61179.6°179.3°
C5C6N6H6260.4°0.8°
C4N3C2N10.3°0.1°
C4N3C2H2179.7°180.0°
N6C6N1C2179.9°180.0°
C6N6H61H62120.0°179.9°
C6N1C2N30.4°0.5°
N1C6N6H610.0°0.1°
N1C6N6H62120.0°180.0°
C6N1C2H2179.6°179.6°
N3C2N1H2180.0°179.9°
HOP2OP2POP323.3°60.0°
H1'C1'C2'H2'94.0°160.1°
H2'C2'O2'HO2'57.0°62.2°
H2'C2'C3'H3'24.5°21.3°
H3'C3'N3'H3132.8°147.6°
H3'C3'C4'H4'133.7°124.0°
H4'C4'C5'H5`169.1°66.1°
H4'C4'C5'H5''71.1°173.9°
HACANH148.0°145.0°
HACACBHB255.9°175.0°
HACACBHB3175.6°65.1°
HD1CD1CE1HE10.2°0.0°
HE1CE1CZHZ0.2°0.1°
HZCZCE2HE20.0°0.0°
HE2CE2CD2HD20.1°0.3°
HAMCAMNMHNM261.4°56.2°
HAMCAMNMHNM1178.6°180.0°
HAMCAMCBMHBM2152.0°175.0°
HAMCAMCBMHBM388.0°65.0°
HBM2CBMCGMHGM3173.3°180.0°
HBM2CBMCGMHGM267.5°60.0°
HBM3CBMCGMHGM353.4°60.0°
HBM3CBMCGMHGM2172.6°179.9°
HEM1CEMHEM2HEM3120.0°120.0°

222415

PDB entries from 2024-07-10

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