30V
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.21Å | |
C | CA | sing | 1.51Å | 1.52Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | N | sing | 1.47Å | 1.43Å | |
CB | SG | sing | 1.81Å | 1.79Å | |
C19 | C18 | doub | 1.38Å | 1.39Å | Aromatic |
C19 | C20 | sing | 1.38Å | 1.39Å | Aromatic |
C18 | C17 | sing | 1.38Å | 1.39Å | Aromatic |
C20 | C06 | doub | 1.38Å | 1.38Å | Aromatic |
C17 | C07 | doub | 1.40Å | 1.39Å | Aromatic |
SG | SE | sing | 2.21Å | 2.24Å | |
C06 | C07 | sing | 1.40Å | 1.40Å | Aromatic |
C06 | SE | sing | 1.96Å | 1.92Å | |
C07 | C08 | sing | 1.48Å | 1.53Å | |
C08 | O16 | doub | 1.22Å | 1.21Å | |
C08 | N09 | sing | 1.35Å | 1.43Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
N09 | H7 | sing | 0.97Å | 1.00Å | |
N09 | H8 | sing | 0.97Å | 1.00Å | |
C17 | H9 | sing | 1.08Å | 1.08Å | |
C18 | H10 | sing | 1.08Å | 1.08Å | |
C19 | H11 | sing | 1.08Å | 1.08Å | |
C20 | H12 | sing | 1.08Å | 1.08Å | |
C | OXT | sing | 1.34Å | 72.22Å | |
OXT | HXT | sing | 0.97Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 120.9° | 120.0° |
O | C | OXT | 134.8° | 120.0° |
C | CA | CB | 110.0° | 109.5° |
C | CA | N | 106.0° | 109.5° |
C | CA | HA | 109.6° | 109.4° |
CA | C | OXT | 89.8° | 120.0° |
CB | CA | N | 110.8° | 109.5° |
CA | CB | SG | 116.3° | 109.5° |
CB | CA | HA | 109.5° | 109.5° |
CA | CB | HB2 | 107.8° | 109.5° |
CA | CB | HB1 | 107.7° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.4° | 111.0° |
N | CA | HA | 110.9° | 109.5° |
CB | SG | SE | 105.9° | 103.0° |
SG | CB | HB2 | 107.7° | 109.5° |
SG | CB | HB1 | 107.7° | 109.5° |
C18 | C19 | C20 | 119.9° | 120.3° |
C19 | C18 | C17 | 119.0° | 120.2° |
C19 | C18 | H10 | 120.5° | 119.9° |
C18 | C19 | H11 | 120.1° | 119.9° |
C19 | C20 | C06 | 121.3° | 120.1° |
C20 | C19 | H11 | 120.0° | 119.9° |
C19 | C20 | H12 | 119.4° | 119.9° |
C18 | C17 | C07 | 121.6° | 119.8° |
C18 | C17 | H9 | 119.2° | 120.1° |
C17 | C18 | H10 | 120.5° | 119.9° |
C20 | C06 | C07 | 119.3° | 119.8° |
C20 | C06 | SE | 117.1° | 120.0° |
C06 | C20 | H12 | 119.3° | 119.9° |
C17 | C07 | C06 | 118.9° | 119.8° |
C17 | C07 | C08 | 116.5° | 120.1° |
C07 | C17 | H9 | 119.2° | 120.1° |
SG | SE | C06 | 107.6° | 101.0° |
C07 | C06 | SE | 123.7° | 120.1° |
C06 | C07 | C08 | 124.7° | 120.1° |
C07 | C08 | O16 | 118.3° | 120.0° |
C07 | C08 | N09 | 123.8° | 120.0° |
O16 | C08 | N09 | 117.9° | 120.0° |
C08 | N09 | H7 | 120.0° | 120.0° |
C08 | N09 | H8 | 120.0° | 120.0° |
H | N | H2 | 109.5° | 111.0° |
HB2 | CB | HB1 | 109.5° | 109.5° |
H7 | N09 | H8 | 120.0° | 120.0° |
C | OXT | HXT | 90.0° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 145.0° | 179.9° |
O | C | CA | CB | 55.1° | 100.0° |
O | C | CA | N | 64.8° | 20.1° |
O | C | CA | HA | 175.5° | 140.0° |
O | C | OXT | HXT | 90.0° | 0.0° |
C | CA | CB | N | 116.9° | 120.0° |
C | CA | CB | HA | 120.5° | 120.0° |
C | CA | N | HA | 118.8° | 120.0° |
C | CA | CB | SG | 172.7° | 180.0° |
C | CA | N | H | 180.0° | 63.9° |
C | CA | N | H2 | 60.0° | 60.1° |
C | CA | CB | HB2 | 51.8° | 60.0° |
C | CA | CB | HB1 | 66.3° | 60.0° |
CA | C | OXT | HXT | 90.0° | 180.0° |
CB | CA | N | HA | 121.9° | 120.0° |
CA | CB | SG | HB2 | 121.0° | 120.0° |
CA | CB | SG | HB1 | 121.0° | 120.0° |
CA | CB | SG | SE | 128.7° | 75.0° |
CB | CA | N | H | 60.7° | 176.1° |
CB | CA | N | H2 | 179.3° | 60.0° |
CA | CB | HB2 | HB1 | 116.9° | 120.0° |
CB | CA | C | OXT | 89.9° | 80.0° |
N | CA | CB | SG | 55.9° | 60.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB | HB2 | 65.1° | 60.0° |
N | CA | CB | HB1 | 176.9° | 180.0° |
N | CA | C | OXT | 150.3° | 160.0° |
CB | SG | SE | C06 | 76.6° | 180.0° |
SG | CB | CA | HA | 66.8° | 60.0° |
SG | CB | HB2 | HB1 | 116.9° | 120.0° |
C18 | C19 | C20 | H11 | 180.0° | 179.8° |
C19 | C18 | C17 | H10 | 180.0° | 180.0° |
C18 | C19 | C20 | C06 | 0.2° | 0.5° |
C19 | C18 | C17 | C07 | 0.1° | 0.1° |
C19 | C18 | C17 | H9 | 180.0° | 180.0° |
C18 | C19 | C20 | H12 | 179.8° | 180.0° |
C20 | C19 | C18 | C17 | 0.1° | 0.3° |
C19 | C20 | C06 | H12 | 180.0° | 179.5° |
C19 | C20 | C06 | C07 | 0.6° | 0.5° |
C19 | C20 | C06 | SE | 180.0° | 179.8° |
C20 | C19 | C18 | H10 | 179.9° | 179.7° |
C18 | C17 | C07 | H9 | 180.0° | 180.0° |
C18 | C17 | C07 | C06 | 0.3° | 0.0° |
C18 | C17 | C07 | C08 | 179.9° | 180.0° |
C17 | C18 | C19 | H11 | 179.9° | 179.9° |
C20 | C06 | C07 | C17 | 0.6° | 0.3° |
C20 | C06 | SE | SG | 4.0° | 90.3° |
C20 | C06 | C07 | SE | 179.4° | 179.7° |
C20 | C06 | C07 | C08 | 179.6° | 179.7° |
C06 | C20 | C19 | H11 | 179.8° | 179.7° |
C17 | C07 | C06 | C08 | 179.8° | 180.0° |
C17 | C07 | C06 | SE | 180.0° | 180.0° |
C17 | C07 | C08 | O16 | 0.0° | 180.0° |
C17 | C07 | C08 | N09 | 179.9° | 0.0° |
C07 | C17 | C18 | H10 | 180.0° | 180.0° |
SG | SE | C06 | C07 | 175.4° | 90.0° |
SE | SG | CB | HB2 | 7.7° | 45.0° |
SE | SG | CB | HB1 | 110.3° | 165.0° |
C06 | C07 | C08 | O16 | 179.8° | 0.0° |
C06 | C07 | C08 | N09 | 0.2° | 180.0° |
C06 | C07 | C17 | H9 | 179.7° | 180.0° |
C07 | C06 | C20 | H12 | 179.4° | 180.0° |
SE | C06 | C07 | C08 | 0.3° | 0.0° |
SE | C06 | C20 | H12 | 0.0° | 0.3° |
C07 | C08 | O16 | N09 | 180.0° | 180.0° |
C07 | C08 | N09 | H7 | 180.0° | 0.0° |
C07 | C08 | N09 | H8 | 0.1° | 180.0° |
C08 | C07 | C17 | H9 | 0.1° | 0.0° |
O16 | C08 | N09 | H7 | 0.0° | 180.0° |
O16 | C08 | N09 | H8 | 180.0° | 0.0° |
C08 | N09 | H7 | H8 | 180.0° | 180.0° |
H | N | CA | HA | 61.2° | 56.0° |
H2 | N | CA | HA | 58.9° | 180.0° |
HA | CA | CB | HB2 | 172.2° | 180.0° |
HA | CA | CB | HB1 | 54.2° | 60.0° |
HA | CA | C | OXT | 30.6° | 40.0° |
H9 | C17 | C18 | H10 | 0.0° | 0.0° |
H10 | C18 | C19 | H11 | 0.1° | 0.0° |
H11 | C19 | C20 | H12 | 0.2° | 0.2° |