Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2YN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O32PA2doub1.48Å1.47Å
O21PA1doub1.48Å1.47Å
O22PA2sing1.61Å1.47Å
PA2O42sing1.61Å1.49Å
PA2O12sing1.61Å1.64Å
O41PA1sing1.61Å1.49Å
PA1O11sing1.61Å1.63Å
PA1O31sing1.61Å1.49Å
O33PA3doub1.48Å1.49Å
O11C1sing1.43Å1.49Å
O53PB3doub1.48Å1.48Å
O12C2sing1.43Å1.40Å
C2C1sing1.53Å1.55Å
C2C3sing1.53Å1.54Å
C1C6sing1.53Å1.51Å
PA3O23sing1.61Å1.62Å
PA3O13sing1.61Å1.62Å
PA3O43sing1.61Å1.58Å
O36PA6doub1.48Å1.50Å
O63PB3sing1.61Å1.47Å
PB3O43sing1.61Å1.61Å
PB3O73sing1.61Å1.46Å
O13C3sing1.43Å1.44Å
C3C4sing1.53Å1.50Å
C6O16sing1.43Å1.43Å
C6C5sing1.53Å1.53Å
O16PA6sing1.61Å1.59Å
O46PA6sing1.61Å1.47Å
PA6O26sing1.61Å1.48Å
C4C5sing1.53Å1.49Å
C4O14sing1.43Å1.45Å
C5O15sing1.43Å1.41Å
O14PA4sing1.61Å1.62Å
O15PA5sing1.61Å1.64Å
O24PA4doub1.48Å1.46Å
O34PA4sing1.61Å1.47Å
PA4O44sing1.61Å1.48Å
O45PA5sing1.61Å1.65Å
O45PB5sing1.61Å1.63Å
PA5O25doub1.48Å1.48Å
PA5O35sing1.61Å1.48Å
O65PB5doub1.48Å1.48Å
PB5O55sing1.61Å1.62Å
PB5O75sing1.61Å1.49Å
O55H1sing0.97Å0.95Å
O75H2sing0.97Å0.95Å
O35H3sing0.97Å0.95Å
C5H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
O34H6sing0.97Å0.95Å
O44H7sing0.97Å0.95Å
C6H8sing1.09Å1.10Å
O46H9sing0.97Å0.95Å
O26H10sing0.97Å0.95Å
C1H11sing1.09Å1.10Å
O31H12sing0.97Å0.95Å
O41H13sing0.97Å0.95Å
C2H14sing1.09Å1.10Å
O22H15sing0.97Å0.95Å
O42H16sing0.97Å0.95Å
C3H17sing1.09Å1.10Å
O23H18sing0.97Å0.95Å
O63H19sing0.97Å0.95Å
O73H20sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O32PA2O22115.2°109.5°
O32PA2O42113.7°109.5°
O32PA2O12108.3°109.4°
O21PA1O41115.8°109.5°
O21PA1O11104.4°109.4°
O21PA1O31115.6°109.5°
O22PA2O42116.5°109.5°
O22PA2O12101.5°109.4°
PA2O22H15109.5°113.9°
O42PA2O1299.0°109.4°
PA2O42H16109.5°114.0°
PA2O12C2121.3°123.0°
O41PA1O11100.4°109.5°
O41PA1O31114.3°109.5°
PA1O41H13109.5°114.1°
O11PA1O31103.5°109.5°
PA1O11C1119.2°123.0°
PA1O31H12109.5°114.0°
O33PA3O23110.2°109.5°
O33PA3O13110.6°109.5°
O33PA3O43117.9°109.4°
O11C1C2110.3°109.5°
O11C1C6108.2°109.5°
O11C1H11109.5°109.5°
O53PB3O63114.0°109.5°
O53PB3O4399.7°109.4°
O53PB3O73115.4°109.5°
O12C2C1107.3°109.5°
O12C2C3110.4°109.5°
O12C2H14110.8°109.4°
C1C2C3110.5°109.5°
C2C1C6110.7°109.5°
C2C1H11108.9°109.4°
C1C2H14108.8°109.4°
C2C3O13111.1°109.5°
C2C3C4110.9°109.5°
C3C2H14108.9°109.5°
C2C3H17108.1°109.5°
C1C6O16107.8°109.4°
C1C6C5110.8°109.5°
C1C6H8110.0°109.4°
C6C1H11109.3°109.5°
O23PA3O13108.8°109.5°
O23PA3O43105.0°109.5°
PA3O23H18109.5°114.0°
O13PA3O43103.9°109.5°
PA3O13C3118.3°123.0°
PA3O43PB3119.9°134.0°
O36PA6O1698.4°109.5°
O36PA6O46114.6°109.5°
O36PA6O26115.3°109.5°
O63PB3O43104.6°109.5°
O63PB3O73115.6°109.5°
PB3O63H19109.5°114.0°
O43PB3O73105.0°109.5°
PB3O73H20109.5°114.0°
O13C3C4108.8°109.5°
O13C3H17109.3°109.4°
C3C4C5109.4°109.5°
C3C4O14108.8°109.5°
C3C4H5110.3°109.4°
C4C3H17108.6°109.5°
O16C6C5107.3°109.5°
C6O16PA6121.3°122.9°
O16C6H8111.1°109.5°
C6C5C4111.7°109.5°
C6C5O15108.9°109.5°
C6C5H4109.3°109.5°
C5C6H8109.8°109.5°
O16PA6O46106.7°109.4°
O16PA6O26104.4°109.5°
O46PA6O26114.9°109.5°
PA6O46H9109.5°113.9°
PA6O26H10109.5°114.0°
C5C4O14106.8°109.5°
C4C5O15106.0°109.5°
C4C5H4109.8°109.4°
C5C4H5110.4°109.5°
C4O14PA4122.9°123.0°
O14C4H5111.0°109.5°
C5O15PA5121.9°123.0°
O15C5H4111.1°109.5°
O14PA4O2499.8°109.5°
O14PA4O34107.0°109.5°
O14PA4O44100.7°109.5°
O15PA5O4597.8°109.5°
O15PA5O25109.5°109.5°
O15PA5O35107.2°109.5°
O24PA4O34117.2°109.5°
O24PA4O44115.4°109.4°
O34PA4O44113.6°109.5°
PA4O34H6109.5°114.1°
PA4O44H7109.5°113.9°
PA5O45PB5125.0°134.0°
O45PA5O25109.2°109.4°
O45PA5O35110.5°109.5°
O45PB5O65107.7°109.4°
O45PB5O55102.0°109.5°
O45PB5O75107.1°109.5°
O25PA5O35120.3°109.5°
PA5O35H3109.5°114.0°
O65PB5O55107.5°109.5°
O65PB5O75119.6°109.5°
O55PB5O75111.4°109.5°
PB5O55H1109.5°114.0°
PB5O75H2109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O32PA2O22O42137.0°120.1°
O32PA2O22O12116.7°120.0°
O32PA2O42O12114.6°119.9°
O32PA2O12C232.1°55.0°
O32PA2O22H150.0°60.0°
O32PA2O42H160.0°180.0°
O21PA1O41O11111.8°120.0°
O21PA1O41O31138.2°120.0°
O21PA1O11O31121.4°120.0°
O21PA1O11C1179.7°55.0°
O21PA1O31H120.0°60.1°
O21PA1O41H130.0°179.9°
O22PA2O42O12107.8°120.0°
O22PA2O12C2153.7°175.0°
O22PA2O42H16137.6°59.9°
O42PA2O12C286.7°65.0°
O42PA2O22H15137.0°60.0°
PA2O12C2C1110.8°120.0°
PA2O12C2C3128.6°120.0°
PA2O12C2H147.9°0.0°
O12PA2O22H15116.7°180.0°
O12PA2O42H16114.6°60.1°
O41PA1O11O31118.4°120.0°
O41PA1O11C160.0°65.0°
O41PA1O31H12138.2°60.0°
PA1O11C1C2126.2°120.0°
PA1O11C1C6112.6°120.0°
PA1O11C1H116.4°0.0°
O11PA1O31H12113.5°180.0°
O11PA1O41H13111.8°60.0°
O31PA1O11C158.3°175.0°
O31PA1O41H13138.2°60.0°
O33PA3O23O13121.4°120.0°
O33PA3O23O43127.9°120.0°
O33PA3O13O43127.4°120.0°
O33PA3O43PB351.7°45.0°
O33PA3O13C391.8°55.0°
O33PA3O23H180.0°179.9°
O11C1C2O1253.0°60.0°
O11C1C2C6119.7°120.0°
O11C1C2H11120.2°120.0°
O11C1C2C3173.4°180.0°
O11C1C6H11119.2°120.0°
O11C1C6O1668.3°60.0°
O11C1C6C5174.6°180.0°
O11C1C6H853.0°60.0°
O11C1C2H1467.0°60.0°
O53PB3O43PA321.2°40.0°
O53PB3O63O43107.9°119.9°
O53PB3O63O73137.2°120.0°
O53PB3O43O73119.7°120.0°
O53PB3O63H190.0°180.0°
O53PB3O73H200.0°60.0°
O12C2C1C3120.4°120.0°
O12C2C1H14119.9°119.9°
O12C2C3H14121.9°120.0°
O12C2C1C666.7°60.0°
O12C2C3O1359.5°60.0°
O12C2C3C461.6°60.0°
O12C2C1H11173.2°180.0°
O12C2C3H17179.4°180.0°
C1C2C3H14119.5°120.0°
C2C1C6H11119.8°120.0°
C1C2C3O13178.1°180.0°
C1C2C3C457.0°60.0°
C2C1C6O16170.7°180.0°
C2C1C6C553.6°60.0°
C2C1C6H868.0°60.0°
C1C2C3H1762.0°60.0°
C3C2C1C653.7°60.0°
C2C3O13PA383.8°120.0°
C2C3O13C4122.3°120.0°
C2C3O13H17119.2°120.0°
C2C3C4H17118.7°120.0°
C2C3C4C559.5°60.0°
C2C3C4O14175.9°180.0°
C2C3C4H562.1°60.0°
C3C2C1H1166.4°60.0°
C1C6O16C5119.4°120.0°
C1C6O16H8120.6°120.0°
C1C6C5H8121.7°120.0°
C1C6O16PA6125.8°120.0°
C1C6C5C457.4°60.0°
C1C6C5O15174.1°180.0°
C1C6C5H464.3°60.0°
C6C1C2H14173.3°180.0°
O23PA3O13O43111.5°120.0°
O23PA3O43PB3174.9°75.0°
O23PA3O13C329.4°65.0°
O13PA3O43PB371.0°165.0°
PA3O13C3C4153.9°120.0°
PA3O13C3H1735.5°0.0°
O13PA3O23H18121.4°60.0°
PA3O43PB3O63139.4°79.9°
PA3O43PB3O7398.5°160.0°
O43PA3O13C3140.8°175.0°
O43PA3O23H18127.9°60.0°
O36PA6O16C6103.2°55.0°
O36PA6O16O46118.9°120.0°
O36PA6O16O26118.9°120.1°
O36PA6O46O26137.0°120.0°
O36PA6O46H90.0°60.0°
O36PA6O26H100.0°180.0°
O63PB3O43O73122.1°120.0°
O63PB3O73H20136.6°60.0°
O43PB3O63H19107.9°60.0°
O43PB3O73H20108.7°180.0°
O73PB3O63H19137.1°60.0°
O13C3C4H17118.9°119.9°
O13C3C4C5178.0°180.0°
O13C3C4O1461.6°59.9°
O13C3C4H560.4°60.0°
O13C3C2H1462.4°60.0°
C3C4C5C659.8°60.0°
C3C4C5O14117.6°120.0°
C3C4C5H5121.6°119.9°
C3C4O14H5121.6°119.9°
C3C4C5O15178.2°180.0°
C3C4O14PA4117.9°120.0°
C3C4C5H461.7°60.0°
C4C3C2H14176.5°180.0°
O16C6C5H8120.9°120.1°
C6O16PA6O4615.7°175.0°
C6O16PA6O26137.9°65.1°
O16C6C5C4174.8°179.9°
O16C6C5O1568.5°60.0°
O16C6C5H453.1°60.0°
O16C6C1H1150.9°60.0°
C5C6O16PA6114.8°120.0°
C6C5C4O15118.4°120.0°
C6C5C4H4121.5°120.0°
C6C5C4O14177.4°180.0°
C6C5O15H4120.5°120.0°
C6C5O15PA5121.8°120.0°
C6C5C4H561.8°60.0°
C5C6C1H1166.2°60.0°
O16PA6O46O26115.2°119.9°
PA6O16C6H85.2°0.1°
O16PA6O46H9107.8°180.0°
O16PA6O26H10106.7°59.9°
O46PA6O26H10136.7°60.0°
O26PA6O46H9137.0°60.0°
C5C4O14H5120.4°120.0°
C4C5O15H4119.2°119.9°
C5C4O14PA4124.0°120.0°
C4C5O15PA5117.8°120.0°
C4C5C6H864.3°60.0°
C5C4C3H1759.1°60.1°
O14C4C5O1564.2°60.0°
C4O14PA4O2496.7°55.0°
C4O14PA4O3425.9°175.0°
C4O14PA4O44144.9°65.0°
O14C4C5H455.9°60.0°
O14C4C3H1757.2°60.0°
C5O15PA5O45123.1°175.0°
C5O15PA5O259.5°55.0°
C5O15PA5O35122.5°65.0°
O15C5C4H556.7°60.1°
O15C5C6H852.4°60.0°
O14PA4O24O34115.0°120.0°
O14PA4O24O44106.9°120.0°
O14PA4O34O44110.3°120.0°
PA4O14C4H53.6°0.0°
O14PA4O34H6111.0°180.0°
O14PA4O44H7106.4°60.0°
O15PA5O45O25113.9°120.0°
O15PA5O45O35111.7°120.0°
O15PA5O45PB5147.4°160.0°
O15PA5O25O35124.7°120.0°
O15PA5O35H3125.8°60.0°
PA5O15C5H41.4°0.1°
O24PA4O34O44138.7°120.0°
O24PA4O34H60.0°60.0°
O24PA4O44H70.0°180.0°
O34PA4O44H7139.5°60.0°
O44PA4O34H6138.8°60.0°
O45PA5O25O35129.3°120.0°
PA5O45PB5O65171.0°45.0°
PA5O45PB5O5558.0°165.0°
PA5O45PB5O7559.2°75.0°
O45PA5O35H3128.7°60.0°
PB5O45PA5O2598.8°40.0°
PB5O45PA5O3535.7°79.9°
O45PB5O65O55109.2°120.0°
O45PB5O65O75122.5°120.0°
O45PB5O55O75114.0°120.0°
O45PB5O55H1113.1°180.0°
O45PB5O75H2122.8°60.0°
O25PA5O35H30.0°179.9°
O65PB5O55O75132.9°120.0°
O65PB5O55H10.0°60.0°
O65PB5O75H20.0°180.0°
O55PB5O75H2126.5°60.0°
O75PB5O55H1132.9°60.0°
H4C5C4H5176.7°180.0°
H4C5C6H8174.0°179.9°
H5C4C3H17179.3°180.0°
H8C6C1H11172.2°180.0°
H11C1C2H1453.2°60.0°
H14C2C3H1757.5°60.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon