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2YD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OCdoub1.22Å1.22Å
O1C1sing1.36Å1.34Å
CC1sing1.48Å1.48Å
CC7sing1.41Å1.48Å
C8C7sing1.50Å1.51Å
C1C2doub1.35Å1.35Å
C7C6doub1.35Å1.34Å
C2C22sing1.50Å1.52Å
C2C3sing1.51Å1.52Å
C6C3sing1.51Å1.50Å
C6O3sing1.34Å1.35Å
C18C17sing1.53Å1.56Å
C10C9sing1.52Å1.56Å
C22O4sing1.44Å1.45Å
C22C23sing1.52Å1.56Å
C3C4sing1.53Å1.54Å
O3C5sing1.46Å1.44Å
C27C23sing1.54Å1.56Å
C19C17sing1.53Å1.57Å
C19C20sing1.54Å1.55Å
O4C21sing1.43Å1.43Å
C23C24sing1.53Å1.57Å
C17C16sing1.50Å1.54Å
C21C20sing1.52Å1.56Å
C21C25sing1.53Å1.57Å
C9C5sing1.52Å1.59Å
C9C11sing1.52Å1.56Å
C5C4sing1.54Å1.57Å
C5O2sing1.44Å1.45Å
C24C25sing1.53Å1.58Å
C24O5sing1.43Å1.45Å
C16C15doub1.30Å1.37Å
C25C26sing1.53Å1.56Å
C11C12sing1.52Å1.57Å
C12C13sing1.54Å1.56Å
C12C14sing1.53Å1.57Å
C15C14sing1.52Å1.54Å
C15C28sing1.51Å1.52Å
O1H1sing0.97Å0.95Å
C3H4sing1.10Å1.10Å
C22H5sing1.11Å1.10Å
C23H6sing1.09Å1.10Å
C27H7sing1.09Å1.10Å
C27H8sing1.09Å1.10Å
C27H9sing1.09Å1.10Å
C24H10sing1.09Å1.10Å
O5H11sing0.97Å0.95Å
C25H12sing1.09Å1.10Å
C26H13sing1.09Å1.10Å
C26H14sing1.09Å1.10Å
C26H15sing1.09Å1.10Å
C21H16sing1.10Å1.10Å
C20H17sing1.09Å1.10Å
C20H18sing1.09Å1.10Å
C19H19sing1.09Å1.10Å
C19H20sing1.09Å1.10Å
C17H21sing1.11Å1.10Å
C18H22sing1.09Å1.10Å
C18H23sing1.09Å1.10Å
C18H24sing1.09Å1.10Å
C16H25sing1.10Å1.08Å
C28H26sing1.09Å1.10Å
C28H27sing1.09Å1.10Å
C28H28sing1.09Å1.10Å
C14H29sing1.09Å1.10Å
C14H30sing1.09Å1.10Å
C12H31sing1.08Å1.10Å
C13H32sing1.09Å1.10Å
C13H33sing1.09Å1.10Å
C13H34sing1.09Å1.10Å
C11H35sing1.10Å1.10Å
C11H36sing1.09Å1.10Å
C9H37sing1.12Å1.10Å
C10H38sing1.09Å1.10Å
C10H39sing1.09Å1.10Å
C10H40sing1.09Å1.10Å
C4H41sing1.08Å1.10Å
C4H42sing1.10Å1.10Å
O2H43sing0.97Å0.95Å
C8H44sing1.09Å1.10Å
C8H45sing1.09Å1.10Å
C8H46sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCC1117.6°118.5°
OCC7121.0°119.4°
O1C1C117.3°116.7°
O1C1C2121.5°123.1°
C1O1H1109.5°114.0°
C1CC7121.4°122.0°
CC1C2121.1°120.2°
CC7C8122.6°120.4°
CC7C6116.5°119.6°
C8C7C6120.8°120.1°
C7C8H44109.5°109.5°
C7C8H45109.5°109.5°
C7C8H46109.5°109.5°
C1C2C22123.4°125.3°
C1C2C3117.5°115.2°
C7C6C3123.7°117.0°
C7C6O3123.3°134.2°
C22C2C3118.0°119.5°
C2C22O4103.8°109.6°
C2C22C23117.4°114.7°
C2C22H5108.5°107.2°
C2C3C6115.3°119.3°
C2C3C4130.7°112.2°
C2C3H4103.8°105.7°
C3C6O3112.5°108.7°
C6C3C496.4°105.5°
C6C3H4104.1°106.7°
C6O3C5108.1°111.5°
C18C17C19108.6°110.7°
C18C17C16108.6°112.1°
C18C17H21107.9°106.8°
C17C18H22109.5°109.5°
C17C18H23109.4°109.5°
C17C18H24109.5°109.5°
C10C9C5117.9°112.7°
C10C9C11111.2°112.5°
C10C9H37105.2°106.4°
C9C10H38109.5°109.5°
C9C10H39109.5°109.5°
C9C10H40109.5°109.5°
O4C22C23109.5°110.7°
C22O4C21117.4°111.8°
O4C22H5109.5°106.6°
C22C23C27113.5°109.4°
C22C23C24107.9°111.5°
C23C22H5108.0°107.6°
C22C23H6107.0°111.2°
C3C4C599.5°101.5°
C4C3H4103.7°106.6°
C3C4H41111.9°112.5°
C3C4H42111.9°110.2°
O3C5C9110.2°109.1°
O3C5C498.2°107.3°
O3C5O2107.9°107.4°
C27C23C24114.1°107.2°
C27C23H6107.0°109.5°
C23C27H7109.5°109.5°
C23C27H8109.5°109.5°
C23C27H9109.5°109.5°
C17C19C20113.4°109.2°
C19C17C16115.6°111.8°
C17C19H19108.5°111.2°
C17C19H20108.5°109.5°
C19C17H21107.7°107.4°
C19C20C21112.4°108.9°
C19C20H17108.7°108.8°
C19C20H18108.7°109.3°
C20C19H19108.5°108.9°
C20C19H20108.5°108.5°
O4C21C20102.7°111.7°
O4C21C25109.5°107.4°
O4C21H16110.5°108.1°
C23C24C25113.6°111.2°
C23C24O5110.7°109.0°
C24C23H6106.9°108.0°
C23C24H10107.0°108.9°
C17C16C15132.4°126.4°
C16C17H21108.2°107.8°
C17C16H25113.8°117.0°
C20C21C25116.7°111.8°
C20C21H16108.7°109.3°
C21C20H17108.7°110.3°
C21C20H18108.8°110.2°
C21C25C24109.2°108.0°
C21C25C26113.1°109.9°
C21C25H12106.5°109.5°
C25C21H16108.6°108.5°
C5C9C11111.2°112.2°
C9C5C4121.3°114.6°
C9C5O2108.3°109.5°
C5C9H37104.9°106.1°
C9C11C12118.5°112.9°
C9C11H35107.2°108.5°
C9C11H36107.2°110.5°
C11C9H37105.2°106.3°
C4C5O2110.0°108.6°
C5C4H41111.9°113.9°
C5C4H42111.9°110.1°
C5O2H43109.5°114.0°
C25C24O5109.9°109.2°
C24C25C26114.4°109.8°
C25C24H10106.9°109.2°
C24C25H12106.5°109.9°
O5C24H10108.5°109.2°
C24O5H11109.5°114.0°
C16C15C14123.3°118.0°
C16C15C28125.0°123.6°
C15C16H25113.8°116.6°
C26C25H12106.6°109.6°
C25C26H13109.5°109.5°
C25C26H14109.5°109.4°
C25C26H15109.4°109.5°
C11C12C13112.3°108.7°
C11C12C14109.5°109.9°
C11C12H31108.1°111.1°
C12C11H35107.2°108.3°
C12C11H36107.2°109.6°
C13C12C14110.5°108.0°
C13C12H31108.2°109.8°
C12C13H32109.5°109.5°
C12C13H33109.5°109.5°
C12C13H34109.5°109.5°
C12C14C15118.9°110.0°
C12C14H29107.1°109.1°
C12C14H30107.1°109.9°
C14C12H31108.1°109.2°
C14C15C28111.6°118.4°
C15C14H29107.1°108.6°
C15C14H30107.1°109.6°
C15C28H26109.5°109.4°
C15C28H27109.5°109.5°
C15C28H28109.5°109.5°
H7C27H8109.5°109.5°
H7C27H9109.5°109.5°
H8C27H9109.5°109.5°
H13C26H14109.4°109.4°
H13C26H15109.5°109.5°
H14C26H15109.5°109.5°
H17C20H18109.5°109.4°
H19C19H20109.5°109.5°
H22C18H23109.5°109.5°
H22C18H24109.4°109.4°
H23C18H24109.5°109.4°
H26C28H27109.5°109.5°
H26C28H28109.5°109.5°
H27C28H28109.4°109.4°
H29C14H30109.4°109.5°
H32C13H33109.4°109.5°
H32C13H34109.5°109.5°
H33C13H34109.5°109.5°
H35C11H36109.5°106.8°
H38C10H39109.5°109.4°
H38C10H40109.4°109.4°
H39C10H40109.5°109.4°
H41C4H42109.5°108.5°
H44C8H45109.5°109.5°
H44C8H46109.5°109.4°
H45C8H46109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCC1O16.5°15.4°
OCC1C7178.0°180.0°
OCC7C81.9°12.4°
OCC1C2175.2°165.2°
OCC7C6177.6°167.5°
O1C1CC2178.3°179.5°
O1C1CC7175.5°164.6°
O1C1C2C224.4°2.2°
O1C1C2C3163.2°176.2°
C1CC7C8176.1°167.6°
C1CC7C60.4°12.5°
CC1C2C22177.4°177.2°
CC1C2C315.1°4.3°
CC1O1H13.1°0.5°
CC7C8C6175.5°179.9°
C7CC1C22.8°14.8°
CC7C6C311.4°8.3°
CC7C6O3177.4°167.8°
CC7C8H44180.0°0.0°
CC7C8H4560.0°120.1°
CC7C8H4660.0°120.0°
C8C7C6C3172.8°171.6°
C8C7C6O31.6°12.3°
C7C8H44H45120.0°120.0°
C7C8H44H46120.0°120.0°
C7C8H45H46120.0°120.0°
C1C2C22C3167.5°178.4°
C1C2C3C624.2°24.9°
C1C2C22O4128.0°107.6°
C1C2C22C23111.0°17.7°
C1C2C3C4148.8°149.0°
C2C1O1H1178.6°180.0°
C1C2C3H489.0°95.2°
C1C2C22H511.7°137.1°
C7C6C3C223.2°27.5°
C7C6C3O3172.1°177.1°
C7C6C3C4164.4°154.7°
C7C6O3C5164.0°164.5°
C7C6C3H489.8°92.1°
C6C7C8H444.5°179.8°
C6C7C8H45115.5°59.8°
C6C7C8H46124.5°60.2°
C22C2C3C6167.6°156.6°
C2C22O4C23126.1°127.5°
C2C22O4H5115.6°115.7°
C2C22C23H5122.9°119.2°
C22C2C3C442.9°32.5°
C2C22C23C2760.4°66.6°
C2C22O4C21170.6°170.8°
C2C22C23C24172.1°174.9°
C22C2C3H479.3°83.3°
C2C22C23H657.4°54.4°
C2C3C6C4141.1°127.2°
C2C3C6H4113.0°119.6°
C2C3C6O3164.7°149.6°
C3C2C22O439.5°74.1°
C3C2C22C2381.5°160.7°
C2C3C4H4122.2°115.3°
C2C3C4C5174.0°154.0°
C3C2C22H5155.8°41.3°
C2C3C4H4167.6°83.9°
C2C3C4H4255.6°37.4°
C6C3C4H4106.2°113.3°
C3C6O3C58.1°11.8°
C6C3C4C542.5°22.5°
C6C3C4H41160.8°144.7°
C6C3C4H4275.9°94.0°
O3C6C3C423.6°22.3°
C6O3C5C992.5°121.4°
C6O3C5C435.3°3.3°
C6O3C5O2149.5°119.9°
O3C6C3H482.3°90.9°
C18C17C19C16122.3°125.7°
C18C17C19H21116.6°116.2°
C18C17C19C20169.9°142.2°
C18C17C16H21116.8°117.2°
C18C17C16C15135.5°60.8°
C18C17C19H1949.3°97.6°
C18C17C19H2069.5°23.5°
C17C18H22H23120.0°120.1°
C17C18H22H24120.0°120.0°
C17C18H23H24120.0°120.1°
C18C17C16H2544.5°119.0°
C10C9C5O343.7°86.6°
C10C9C5C11130.1°128.2°
C10C9C5H37116.6°116.0°
C10C9C11H37113.4°116.1°
C10C9C5C470.0°33.8°
C10C9C5O2161.5°156.2°
C10C9C11C1265.7°47.0°
C10C9C11H3555.6°73.0°
C10C9C11H36173.0°170.2°
C9C10H38H39120.0°120.0°
C9C10H38H40120.0°120.1°
C9C10H39H40120.0°120.0°
O4C22C23H5119.2°116.2°
O4C22C23C27178.3°168.7°
O4C22C23C2454.2°50.3°
C22O4C21C20174.0°168.9°
C22O4C21C2561.3°68.2°
O4C22C23H660.5°70.3°
C22O4C21H1658.3°48.6°
C22C23C27C24124.2°121.1°
C22C23C27H6117.7°122.0°
C23C22O4C2163.3°61.7°
C22C23C24H6114.8°122.4°
C22C23C24C2551.9°48.4°
C22C23C24O5176.2°168.9°
C22C23C27H7180.0°60.0°
C22C23C27H860.0°180.0°
C22C23C27H960.0°60.0°
C22C23C24H1065.8°72.0°
C3C4C5O348.7°16.3°
C3C4C5C971.0°105.0°
C3C4C5H41118.4°121.2°
C3C4C5H42118.4°116.7°
C3C4C5O2161.2°132.1°
C3C4H41H42124.7°122.2°
O3C5C9C4113.7°120.3°
O3C5C9O2117.8°117.3°
O3C5C9C11173.9°145.2°
O3C5C4O2112.5°115.8°
O3C5C9H3772.9°29.5°
O3C5C4H41167.1°137.5°
O3C5C4H4269.7°100.4°
O3C5O2H43180.0°61.6°
C27C23C24H6118.1°117.8°
C27C23C24C25179.0°168.2°
C27C23C24O556.7°71.3°
C27C23C22H562.5°52.6°
C23C27H7H8120.0°120.0°
C23C27H7H9120.0°120.0°
C23C27H8H9120.0°120.0°
C27C23C24H1061.4°47.8°
C17C19C20H19120.6°121.6°
C17C19C20H20120.6°119.3°
C19C17C16H21120.9°117.8°
C17C19C20C21174.2°148.3°
C19C17C16C15102.2°64.2°
C17C19C20H1753.8°91.4°
C17C19C20H1865.3°27.9°
C17C19H19H20118.2°121.1°
C19C17C18H22180.0°60.0°
C19C17C18H2360.0°180.0°
C19C17C18H2460.0°60.0°
C19C17C16H2577.8°116.0°
C19C20C21O462.3°122.9°
C20C19C17C1667.8°92.1°
C19C20C21H17120.4°119.3°
C19C20C21H18120.4°119.8°
C19C20C21C25177.9°116.7°
C19C20C21H1654.7°3.4°
C19C20H17H18118.6°119.3°
C20C19H19H20118.2°118.5°
C20C19C17H2153.3°26.0°
O4C21C20C25119.8°120.4°
O4C21C20H16117.0°119.5°
O4C21C25H16120.7°116.6°
O4C21C25C2451.3°63.1°
O4C21C25C2677.3°56.7°
C21O4C22H554.9°55.1°
O4C21C25H12165.9°177.2°
O4C21C20H1758.1°117.8°
O4C21C20H18177.2°3.1°
C23C24C25C2150.7°54.4°
C23C24C25O5124.7°120.4°
C23C24C25H10117.8°120.2°
C23C24O5H10117.1°118.9°
C23C24C25C2677.2°65.4°
C24C23C22H564.9°65.9°
C24C23C27H755.8°178.9°
C24C23C27H864.2°58.9°
C24C23C27H9175.8°61.1°
C23C24O5H11180.0°60.0°
C23C24C25H12165.4°173.9°
C17C16C15H25180.0°179.8°
C17C16C15C14175.2°179.0°
C17C16C15C282.7°0.3°
C16C17C19H19171.6°28.1°
C16C17C19H2052.8°149.2°
C16C17C18H2253.6°174.4°
C16C17C18H2366.4°54.4°
C16C17C18H24173.5°65.6°
C20C21C25H16123.2°120.5°
C20C21C25C24167.4°174.0°
C20C21C25C2638.8°66.2°
C20C21C25H1278.0°54.3°
C21C20H17H18118.7°121.4°
C21C20C19H1965.2°26.7°
C21C20C19H2053.7°92.4°
C21C25C24C26127.9°119.8°
C21C25C24H12114.6°119.5°
C21C25C24O5175.4°174.8°
C21C25C26H12116.7°120.4°
C21C25C24H1067.1°65.8°
C21C25C26H13180.0°58.6°
C21C25C26H1460.0°61.3°
C21C25C26H1560.0°178.7°
C25C21C20H1761.7°2.6°
C25C21C20H1857.5°123.5°
C5C9C11H37113.1°115.6°
C9C5C4O2127.7°122.9°
C5C9C11C12160.7°81.3°
C5C9C11H3578.0°158.7°
C5C9C11H3639.5°41.9°
C5C9C10H38180.0°60.0°
C5C9C10H3960.0°180.0°
C5C9C10H4060.0°60.0°
C9C5C4H4147.3°16.1°
C9C5C4H42170.6°138.3°
C9C5O2H4360.7°180.0°
C11C9C5C460.2°94.5°
C11C9C5O268.4°27.9°
C9C11C12H35121.3°120.1°
C9C11C12H36121.3°123.7°
C9C11C12C1374.0°104.5°
C9C11C12C14162.9°137.5°
C9C11C12H3145.3°16.5°
C9C11H35H36115.9°119.2°
C11C9C10H3849.9°68.0°
C11C9C10H39169.9°51.9°
C11C9C10H4070.1°171.9°
C5C4C3H463.8°90.7°
C4C5C9H37173.4°149.8°
C5C4H41H42124.6°123.0°
C4C5O2H4373.9°54.1°
O2C5C9H3744.9°87.8°
O2C5C4H4180.4°106.7°
O2C5C4H4242.8°15.4°
C25C24O5H10116.5°119.4°
C24C25C26H12117.4°120.9°
C25C24C23H662.8°74.0°
C25C24O5H1153.6°178.2°
C24C25C26H1354.1°60.1°
C24C25C26H1465.8°180.0°
C24C25C26H15174.1°60.0°
C24C25C21H1669.4°53.5°
O5C24C25C2647.5°55.0°
O5C24C23H661.5°46.5°
O5C24C25H1270.0°65.7°
C16C15C14C1218.9°117.8°
C16C15C14C28178.1°179.3°
C15C16C17H2118.7°178.0°
C16C15C28H26180.0°0.0°
C16C15C28H2760.0°120.1°
C16C15C28H2860.0°120.0°
C16C15C14H29140.3°122.8°
C16C15C14H30102.5°3.2°
C26C25C24H10165.1°174.4°
C25C26H13H14120.0°119.9°
C25C26H13H15120.0°120.1°
C25C26H14H15120.0°120.0°
C26C25C21H16162.0°173.3°
C11C12C13C14122.6°119.2°
C11C12C13H31119.2°121.8°
C11C12C14H31117.5°122.2°
C11C12C14C1562.2°144.1°
C11C12C14H2959.1°96.8°
C11C12C14H30176.4°23.3°
C11C12C13H32180.0°59.2°
C11C12C13H3360.0°60.8°
C11C12C13H3460.0°179.2°
C12C11H35H36115.9°118.0°
C12C11C9H3747.7°163.1°
C13C12C14H31118.3°119.4°
C13C12C14C15173.6°97.5°
C13C12C14H2965.0°21.6°
C13C12C14H3052.2°141.7°
C12C13H32H33120.0°120.0°
C12C13H32H34120.0°120.0°
C12C13H33H34120.0°120.0°
C13C12C11H35164.7°15.7°
C13C12C11H3647.3°131.8°
C12C14C15H29121.4°119.4°
C12C14C15H30121.4°121.0°
C12C14C15C28159.3°62.9°
C12C14H29H30115.7°120.4°
C14C12C13H3257.4°60.0°
C14C12C13H3362.6°180.0°
C14C12C13H34177.4°60.0°
C14C12C11H3541.6°102.4°
C14C12C11H3675.9°13.8°
C14C15C16H254.8°0.8°
C14C15C28H261.9°179.2°
C14C15C28H27121.9°59.2°
C14C15C28H28118.1°60.8°
C15C14H29H30115.7°119.7°
C15C14C12H3155.3°21.9°
C28C15C16H25177.3°179.9°
C15C28H26H27120.0°120.0°
C15C28H26H28120.0°120.0°
C15C28H27H28120.0°120.0°
C28C15C14H2937.9°56.5°
C28C15C14H3079.4°176.1°
H4C3C4H4154.6°31.4°
H4C3C4H42177.9°152.7°
H5C22C23H6179.7°173.6°
H6C23C27H762.3°62.1°
H6C23C27H8177.7°58.0°
H6C23C27H957.8°177.9°
H6C23C24H10179.5°165.6°
H7C27H8H9120.0°120.0°
H10C24O5H1162.9°58.9°
H10C24C25H1247.6°53.7°
H12C25C26H1363.3°179.1°
H12C25C26H14176.7°59.1°
H12C25C26H1556.7°60.9°
H12C25C21H1645.2°66.2°
H13C26H14H15120.0°120.0°
H16C21C20H17175.1°122.7°
H16C21C20H1865.7°116.4°
H17C20C19H19174.4°146.9°
H17C20C19H2066.8°27.9°
H18C20C19H1955.3°93.7°
H18C20C19H20174.1°147.2°
H19C19C17H2167.3°146.2°
H20C19C17H21173.9°92.7°
H21C17C18H2263.5°56.7°
H21C17C18H23176.5°63.4°
H21C17C18H2456.5°176.6°
H21C17C16H25161.3°1.8°
H22C18H23H24120.0°119.9°
H26C28H27H28120.0°120.0°
H29C14C12H31176.6°141.0°
H30C14C12H3166.1°98.8°
H31C12C13H3260.8°179.0°
H31C12C13H33179.2°61.0°
H31C12C13H3459.2°59.0°
H31C12C11H3576.0°136.6°
H31C12C11H36166.6°107.2°
H32C13H33H34120.0°120.0°
H35C11C9H37169.0°43.1°
H36C11C9H3773.6°73.7°
H37C9C10H3863.5°175.9°
H37C9C10H3956.5°64.1°
H37C9C10H40176.5°55.9°
H38C10H39H40120.0°119.9°
H44C8H45H46120.0°119.9°

224931

PDB entries from 2024-09-11

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