2YC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C11 | C10 | sing | 1.53Å | 1.53Å | |
| C10 | C9 | sing | 1.55Å | 1.52Å | |
| C10 | C7 | sing | 1.55Å | 1.53Å | |
| C9 | C8 | sing | 1.51Å | 1.50Å | |
| O | C | doub | 1.21Å | 1.22Å | |
| C7 | C | sing | 1.51Å | 1.51Å | |
| C7 | N2 | sing | 1.47Å | 1.45Å | |
| O1 | C6 | doub | 1.21Å | 1.34Å | |
| C | N | sing | 1.35Å | 1.34Å | |
| C8 | N2 | doub | 1.27Å | 1.26Å | |
| C6 | O2 | sing | 1.34Å | 1.24Å | |
| C6 | C5 | sing | 1.51Å | 1.50Å | |
| N | C1 | sing | 1.47Å | 1.45Å | |
| C2 | C1 | sing | 1.53Å | 1.52Å | |
| C2 | C3 | sing | 1.53Å | 1.51Å | |
| C4 | C5 | sing | 1.53Å | 1.52Å | |
| C4 | C3 | sing | 1.53Å | 1.52Å | |
| C5 | N1 | sing | 1.47Å | 1.45Å | |
| O2 | H1 | sing | 0.97Å | 0.95Å | |
| C5 | H2 | sing | 1.09Å | 1.10Å | |
| N1 | H3 | sing | 1.01Å | 1.00Å | |
| N1 | H4 | sing | 1.01Å | 1.00Å | |
| C4 | H6 | sing | 1.09Å | 1.10Å | |
| C4 | H7 | sing | 1.09Å | 1.10Å | |
| C3 | H8 | sing | 1.09Å | 1.10Å | |
| C3 | H9 | sing | 1.09Å | 1.10Å | |
| C2 | H10 | sing | 1.09Å | 1.10Å | |
| C2 | H11 | sing | 1.09Å | 1.10Å | |
| C1 | H12 | sing | 1.09Å | 1.10Å | |
| C1 | H13 | sing | 1.09Å | 1.10Å | |
| N | H14 | sing | 0.97Å | 1.00Å | |
| C7 | H15 | sing | 1.09Å | 1.10Å | |
| C10 | H16 | sing | 1.09Å | 1.10Å | |
| C11 | H17 | sing | 1.09Å | 1.10Å | |
| C11 | H18 | sing | 1.09Å | 1.10Å | |
| C11 | H19 | sing | 1.09Å | 1.10Å | |
| C9 | H20 | sing | 1.09Å | 1.10Å | |
| C9 | H21 | sing | 1.09Å | 1.10Å | |
| C8 | H22 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C11 | C10 | C9 | 111.8° | 111.1° |
| C11 | C10 | C7 | 112.4° | 111.2° |
| C11 | C10 | H16 | 108.8° | 111.0° |
| C10 | C11 | H17 | 109.5° | 109.5° |
| C10 | C11 | H18 | 109.5° | 109.5° |
| C10 | C11 | H19 | 109.5° | 109.5° |
| C9 | C10 | C7 | 106.3° | 100.9° |
| C10 | C9 | C8 | 100.3° | 103.7° |
| C9 | C10 | H16 | 108.7° | 111.2° |
| C10 | C9 | H20 | 111.7° | 110.6° |
| C10 | C9 | H21 | 111.8° | 110.5° |
| C10 | C7 | C | 110.8° | 110.4° |
| C10 | C7 | N2 | 101.4° | 105.0° |
| C10 | C7 | H15 | 110.2° | 110.4° |
| C7 | C10 | H16 | 108.7° | 111.1° |
| C9 | C8 | N2 | 113.5° | 111.3° |
| C8 | C9 | H20 | 111.7° | 110.6° |
| C8 | C9 | H21 | 111.7° | 110.5° |
| C9 | C8 | H22 | 123.2° | 124.3° |
| O | C | C7 | 119.5° | 120.0° |
| O | C | N | 121.6° | 120.0° |
| C | C7 | N2 | 112.1° | 110.3° |
| C7 | C | N | 118.9° | 120.0° |
| C | C7 | H15 | 110.5° | 110.3° |
| C7 | N2 | C8 | 113.6° | 112.6° |
| N2 | C7 | H15 | 111.4° | 110.3° |
| O1 | C6 | O2 | 120.1° | 120.0° |
| O1 | C6 | C5 | 119.1° | 120.0° |
| C | N | C1 | 121.0° | 120.1° |
| C | N | H14 | 119.5° | 120.0° |
| N2 | C8 | H22 | 123.3° | 124.4° |
| O2 | C6 | C5 | 120.9° | 120.0° |
| C6 | O2 | H1 | 109.5° | 117.0° |
| C6 | C5 | C4 | 110.1° | 109.5° |
| C6 | C5 | N1 | 110.3° | 109.4° |
| C6 | C5 | H2 | 108.7° | 109.5° |
| N | C1 | C2 | 112.6° | 109.5° |
| N | C1 | H12 | 108.7° | 109.4° |
| N | C1 | H13 | 108.7° | 109.5° |
| C1 | N | H14 | 119.5° | 119.9° |
| C1 | C2 | C3 | 112.1° | 109.5° |
| C1 | C2 | H10 | 108.8° | 109.4° |
| C1 | C2 | H11 | 108.8° | 109.4° |
| C2 | C1 | H12 | 108.7° | 109.4° |
| C2 | C1 | H13 | 108.7° | 109.5° |
| C2 | C3 | C4 | 110.4° | 109.5° |
| C2 | C3 | H8 | 109.3° | 109.5° |
| C2 | C3 | H9 | 109.2° | 109.5° |
| C3 | C2 | H10 | 108.8° | 109.5° |
| C3 | C2 | H11 | 108.8° | 109.5° |
| C5 | C4 | C3 | 112.6° | 109.5° |
| C4 | C5 | N1 | 109.9° | 109.5° |
| C4 | C5 | H2 | 108.4° | 109.5° |
| C5 | C4 | H6 | 108.7° | 109.5° |
| C5 | C4 | H7 | 108.7° | 109.5° |
| C3 | C4 | H6 | 108.7° | 109.5° |
| C3 | C4 | H7 | 108.7° | 109.5° |
| C4 | C3 | H8 | 109.2° | 109.5° |
| C4 | C3 | H9 | 109.3° | 109.5° |
| N1 | C5 | H2 | 109.4° | 109.5° |
| C5 | N1 | H3 | 109.5° | 111.0° |
| C5 | N1 | H4 | 109.4° | 111.0° |
| H3 | N1 | H4 | 109.4° | 111.0° |
| H6 | C4 | H7 | 109.5° | 109.5° |
| H8 | C3 | H9 | 109.4° | 109.4° |
| H10 | C2 | H11 | 109.5° | 109.5° |
| H12 | C1 | H13 | 109.5° | 109.5° |
| H17 | C11 | H18 | 109.4° | 109.4° |
| H17 | C11 | H19 | 109.5° | 109.4° |
| H18 | C11 | H19 | 109.4° | 109.4° |
| H20 | C9 | H21 | 109.4° | 110.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C11 | C10 | C9 | C7 | 123.0° | 117.9° |
| C11 | C10 | C9 | H16 | 120.1° | 124.2° |
| C11 | C10 | C7 | H16 | 120.4° | 124.2° |
| C11 | C10 | C9 | C8 | 103.9° | 141.4° |
| C11 | C10 | C7 | C | 140.2° | 99.3° |
| C11 | C10 | C7 | N2 | 100.6° | 141.9° |
| C11 | C10 | C7 | H15 | 17.5° | 23.0° |
| C10 | C11 | H17 | H18 | 120.0° | 120.1° |
| C10 | C11 | H17 | H19 | 120.0° | 120.0° |
| C10 | C11 | H18 | H19 | 120.0° | 120.0° |
| C11 | C10 | C9 | H20 | 137.6° | 100.0° |
| C11 | C10 | C9 | H21 | 14.6° | 22.9° |
| C9 | C10 | C7 | H16 | 116.9° | 117.9° |
| C10 | C9 | C8 | H20 | 118.5° | 118.6° |
| C10 | C9 | C8 | H21 | 118.5° | 118.5° |
| C9 | C10 | C7 | C | 97.2° | 142.8° |
| C9 | C10 | C7 | N2 | 22.0° | 24.0° |
| C10 | C9 | C8 | N2 | 9.4° | 15.9° |
| C9 | C10 | C7 | H15 | 140.2° | 94.9° |
| C9 | C10 | C11 | H17 | 180.0° | 61.4° |
| C9 | C10 | C11 | H18 | 60.0° | 178.6° |
| C9 | C10 | C11 | H19 | 60.0° | 58.6° |
| C10 | C9 | H20 | H21 | 124.3° | 122.8° |
| C10 | C9 | C8 | H22 | 170.6° | 164.0° |
| C7 | C10 | C9 | C8 | 19.1° | 23.5° |
| C10 | C7 | C | O | 79.3° | 97.1° |
| C10 | C7 | C | N2 | 112.5° | 115.6° |
| C10 | C7 | C | H15 | 122.5° | 122.3° |
| C10 | C7 | N2 | H15 | 117.3° | 119.0° |
| C10 | C7 | C | N | 99.9° | 82.9° |
| C10 | C7 | N2 | C8 | 17.2° | 16.2° |
| C7 | C10 | C11 | H17 | 60.5° | 172.9° |
| C7 | C10 | C11 | H18 | 59.5° | 67.1° |
| C7 | C10 | C11 | H19 | 179.5° | 52.9° |
| C7 | C10 | C9 | H20 | 99.4° | 142.1° |
| C7 | C10 | C9 | H21 | 137.6° | 95.0° |
| C9 | C8 | N2 | C7 | 5.2° | 0.1° |
| C9 | C8 | N2 | H22 | 180.0° | 179.9° |
| C8 | C9 | C10 | H16 | 136.0° | 94.4° |
| C8 | C9 | H20 | H21 | 124.3° | 122.8° |
| O | C | C7 | N | 179.1° | 180.0° |
| O | C | C7 | N2 | 168.2° | 18.6° |
| O | C | N | C1 | 0.3° | 0.0° |
| O | C | N | H14 | 179.7° | 180.0° |
| O | C | C7 | H15 | 43.2° | 140.7° |
| C | C7 | N2 | H15 | 124.5° | 122.1° |
| C | C7 | N2 | C8 | 101.0° | 135.1° |
| C7 | C | N | C1 | 178.8° | 180.0° |
| C7 | C | N | H14 | 1.2° | 0.0° |
| C | C7 | C10 | H16 | 19.7° | 24.9° |
| N2 | C7 | C | N | 12.7° | 161.4° |
| N2 | C7 | C10 | H16 | 138.9° | 94.0° |
| C7 | N2 | C8 | H22 | 174.8° | 180.0° |
| O1 | C6 | O2 | C5 | 179.5° | 180.0° |
| O1 | C6 | C5 | C4 | 87.2° | 100.0° |
| O1 | C6 | C5 | N1 | 151.4° | 20.0° |
| O1 | C6 | O2 | H1 | 0.0° | 0.0° |
| O1 | C6 | C5 | H2 | 31.5° | 140.0° |
| C | N | C1 | H14 | 180.0° | 180.0° |
| C | N | C1 | C2 | 97.6° | 180.0° |
| C | N | C1 | H12 | 142.0° | 60.0° |
| C | N | C1 | H13 | 22.9° | 60.0° |
| N | C | C7 | H15 | 137.6° | 39.4° |
| C8 | N2 | C7 | H15 | 134.5° | 102.8° |
| N2 | C8 | C9 | H20 | 109.1° | 134.4° |
| N2 | C8 | C9 | H21 | 127.9° | 102.6° |
| O2 | C6 | C5 | C4 | 92.4° | 80.0° |
| O2 | C6 | C5 | N1 | 29.0° | 160.0° |
| O2 | C6 | C5 | H2 | 149.0° | 40.0° |
| C6 | C5 | C4 | N1 | 121.7° | 119.9° |
| C6 | C5 | C4 | H2 | 118.8° | 120.0° |
| C6 | C5 | C4 | C3 | 177.3° | 175.0° |
| C6 | C5 | N1 | H2 | 119.6° | 120.0° |
| C5 | C6 | O2 | H1 | 179.5° | 180.0° |
| C6 | C5 | N1 | H3 | 180.0° | 64.0° |
| C6 | C5 | N1 | H4 | 60.0° | 60.0° |
| C6 | C5 | C4 | H6 | 56.8° | 65.0° |
| C6 | C5 | C4 | H7 | 62.2° | 55.0° |
| N | C1 | C2 | H12 | 120.5° | 120.0° |
| N | C1 | C2 | H13 | 120.5° | 120.0° |
| N | C1 | C2 | C3 | 170.3° | 180.0° |
| N | C1 | C2 | H10 | 69.3° | 60.0° |
| N | C1 | C2 | H11 | 49.9° | 60.0° |
| N | C1 | H12 | H13 | 118.6° | 120.0° |
| C1 | C2 | C3 | H10 | 120.4° | 120.0° |
| C1 | C2 | C3 | H11 | 120.4° | 119.9° |
| C1 | C2 | C3 | C4 | 169.1° | 180.0° |
| C1 | C2 | C3 | H8 | 70.7° | 60.0° |
| C1 | C2 | C3 | H9 | 49.0° | 60.0° |
| C1 | C2 | H10 | H11 | 118.8° | 119.9° |
| C2 | C1 | H12 | H13 | 118.6° | 120.0° |
| C2 | C1 | N | H14 | 82.4° | 0.0° |
| C2 | C3 | C4 | C5 | 173.4° | 180.0° |
| C2 | C3 | C4 | H8 | 120.2° | 120.0° |
| C2 | C3 | C4 | H9 | 120.1° | 120.0° |
| C2 | C3 | C4 | H6 | 66.1° | 60.0° |
| C2 | C3 | C4 | H7 | 53.0° | 60.0° |
| C2 | C3 | H8 | H9 | 119.5° | 120.0° |
| C3 | C2 | H10 | H11 | 118.8° | 120.1° |
| C3 | C2 | C1 | H12 | 49.9° | 60.0° |
| C3 | C2 | C1 | H13 | 69.2° | 60.0° |
| C5 | C4 | C3 | H6 | 120.5° | 120.0° |
| C5 | C4 | C3 | H7 | 120.5° | 120.0° |
| C4 | C5 | N1 | H2 | 118.9° | 120.0° |
| C4 | C5 | N1 | H3 | 58.5° | 176.0° |
| C4 | C5 | N1 | H4 | 178.5° | 60.0° |
| C5 | C4 | H6 | H7 | 118.5° | 120.0° |
| C5 | C4 | C3 | H8 | 66.4° | 60.0° |
| C5 | C4 | C3 | H9 | 53.3° | 60.0° |
| C3 | C4 | C5 | N1 | 55.6° | 65.1° |
| C3 | C4 | C5 | H2 | 63.9° | 55.0° |
| C3 | C4 | H6 | H7 | 118.6° | 120.0° |
| C4 | C3 | H8 | H9 | 119.6° | 120.0° |
| C4 | C3 | C2 | H10 | 48.7° | 60.0° |
| C4 | C3 | C2 | H11 | 70.5° | 60.1° |
| C5 | N1 | H3 | H4 | 120.0° | 124.0° |
| N1 | C5 | C4 | H6 | 64.9° | 55.0° |
| N1 | C5 | C4 | H7 | 176.1° | 175.0° |
| H2 | C5 | N1 | H3 | 60.4° | 56.0° |
| H2 | C5 | N1 | H4 | 59.6° | 180.0° |
| H2 | C5 | C4 | H6 | 175.6° | 175.0° |
| H2 | C5 | C4 | H7 | 56.6° | 65.0° |
| H6 | C4 | C3 | H8 | 54.1° | 180.0° |
| H6 | C4 | C3 | H9 | 173.7° | 60.0° |
| H7 | C4 | C3 | H8 | 173.1° | 60.0° |
| H7 | C4 | C3 | H9 | 67.2° | 180.0° |
| H8 | C3 | C2 | H10 | 168.9° | 180.0° |
| H8 | C3 | C2 | H11 | 49.7° | 60.0° |
| H9 | C3 | C2 | H10 | 71.4° | 60.0° |
| H9 | C3 | C2 | H11 | 169.3° | 179.9° |
| H10 | C2 | C1 | H12 | 170.3° | 180.0° |
| H10 | C2 | C1 | H13 | 51.2° | 60.0° |
| H11 | C2 | C1 | H12 | 70.5° | 60.0° |
| H11 | C2 | C1 | H13 | 170.4° | 180.0° |
| H12 | C1 | N | H14 | 38.0° | 120.0° |
| H13 | C1 | N | H14 | 157.1° | 120.1° |
| H15 | C7 | C10 | H16 | 102.9° | 147.1° |
| H16 | C10 | C11 | H17 | 59.9° | 62.8° |
| H16 | C10 | C11 | H18 | 179.9° | 57.2° |
| H16 | C10 | C11 | H19 | 60.1° | 177.2° |
| H16 | C10 | C9 | H20 | 17.5° | 24.2° |
| H16 | C10 | C9 | H21 | 105.5° | 147.1° |
| H17 | C11 | H18 | H19 | 120.0° | 119.9° |
| H20 | C9 | C8 | H22 | 70.9° | 45.5° |
| H21 | C9 | C8 | H22 | 52.1° | 77.5° |
