2Y7
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CAA | OAP | sing | 1.43Å | 1.45Å | |
| OAP | CAX | sing | 1.36Å | 1.39Å | |
| CAH | CAX | doub | 1.39Å | 1.40Å | Aromatic |
| CAH | CAG | sing | 1.38Å | 1.40Å | Aromatic |
| CAX | CAY | sing | 1.39Å | 1.40Å | Aromatic |
| CAG | CAW | doub | 1.40Å | 1.38Å | Aromatic |
| CAY | OAQ | sing | 1.36Å | 1.39Å | |
| CAY | CAJ | doub | 1.38Å | 1.41Å | Aromatic |
| OAQ | CAL | sing | 1.43Å | 1.44Å | |
| CAW | CAJ | sing | 1.40Å | 1.41Å | Aromatic |
| CAW | CBA | sing | 1.48Å | 1.34Å | |
| SAS | CBA | sing | 1.76Å | 1.72Å | Aromatic |
| SAS | CAV | sing | 1.76Å | 1.59Å | Aromatic |
| CAK | CAL | sing | 1.53Å | 1.52Å | |
| CAK | FAF | sing | 1.40Å | 1.20Å | |
| CBA | NAO | doub | 1.30Å | 1.33Å | Aromatic |
| CAV | CAB | sing | 1.51Å | 1.54Å | |
| CAV | CBB | doub | 1.34Å | 1.33Å | Aromatic |
| NAO | CBB | sing | 1.31Å | 1.35Å | Aromatic |
| CBB | CBC | sing | 1.51Å | 1.53Å | |
| CBC | CAC | sing | 1.53Å | 1.54Å | |
| CBC | SAR | sing | 1.81Å | 1.79Å | |
| SAR | C2 | sing | 1.76Å | 1.69Å | |
| N3 | C2 | doub | 1.33Å | 1.36Å | Aromatic |
| N3 | C4 | sing | 1.33Å | 1.36Å | Aromatic |
| NAE | C4 | sing | 1.39Å | 1.32Å | |
| C2 | N1 | sing | 1.32Å | 1.33Å | Aromatic |
| C4 | C5 | doub | 1.39Å | 1.39Å | Aromatic |
| N1 | C6 | doub | 1.33Å | 1.33Å | Aromatic |
| C5 | C6 | sing | 1.39Å | 1.39Å | Aromatic |
| C6 | NAD | sing | 1.39Å | 1.31Å | |
| CAK | H1 | sing | 1.09Å | 1.10Å | |
| CAK | H2 | sing | 1.09Å | 1.10Å | |
| CAL | H3 | sing | 1.09Å | 1.10Å | |
| CAL | H4 | sing | 1.09Å | 1.10Å | |
| CAJ | H5 | sing | 1.08Å | 1.08Å | |
| CAA | H6 | sing | 1.09Å | 1.10Å | |
| CAA | H7 | sing | 1.09Å | 1.10Å | |
| CAA | H8 | sing | 1.09Å | 1.10Å | |
| CAH | H9 | sing | 1.08Å | 1.08Å | |
| CAG | H10 | sing | 1.08Å | 1.08Å | |
| CAB | H11 | sing | 1.09Å | 1.10Å | |
| CAB | H12 | sing | 1.09Å | 1.10Å | |
| CAB | H13 | sing | 1.09Å | 1.10Å | |
| CBC | H14 | sing | 1.09Å | 1.10Å | |
| CAC | H15 | sing | 1.09Å | 1.10Å | |
| CAC | H16 | sing | 1.09Å | 1.10Å | |
| CAC | H17 | sing | 1.09Å | 1.10Å | |
| NAD | H18 | sing | 0.97Å | 1.00Å | |
| NAD | H19 | sing | 0.97Å | 1.00Å | |
| C5 | H20 | sing | 1.08Å | 1.08Å | |
| NAE | H21 | sing | 0.97Å | 1.00Å | |
| NAE | H22 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CAA | OAP | CAX | 121.3° | 117.0° |
| OAP | CAA | H6 | 109.5° | 109.4° |
| OAP | CAA | H7 | 109.4° | 109.5° |
| OAP | CAA | H8 | 109.5° | 109.5° |
| OAP | CAX | CAH | 125.2° | 119.9° |
| OAP | CAX | CAY | 116.4° | 119.9° |
| CAX | CAH | CAG | 121.8° | 120.2° |
| CAH | CAX | CAY | 118.4° | 120.2° |
| CAX | CAH | H9 | 119.1° | 119.9° |
| CAH | CAG | CAW | 120.1° | 120.0° |
| CAG | CAH | H9 | 119.1° | 120.0° |
| CAH | CAG | H10 | 119.9° | 120.0° |
| CAX | CAY | OAQ | 115.2° | 120.0° |
| CAX | CAY | CAJ | 119.9° | 120.0° |
| CAG | CAW | CAJ | 118.8° | 119.9° |
| CAG | CAW | CBA | 119.3° | 120.1° |
| CAW | CAG | H10 | 120.0° | 120.0° |
| OAQ | CAY | CAJ | 125.0° | 120.0° |
| CAY | OAQ | CAL | 116.8° | 117.0° |
| CAY | CAJ | CAW | 120.9° | 119.9° |
| CAY | CAJ | H5 | 119.5° | 120.1° |
| OAQ | CAL | CAK | 107.5° | 109.5° |
| OAQ | CAL | H3 | 110.0° | 109.5° |
| OAQ | CAL | H4 | 109.9° | 109.5° |
| CAJ | CAW | CBA | 121.8° | 120.0° |
| CAW | CAJ | H5 | 119.5° | 120.1° |
| CAW | CBA | SAS | 125.0° | 125.5° |
| CAW | CBA | NAO | 127.4° | 125.4° |
| CBA | SAS | CAV | 94.9° | 89.8° |
| SAS | CBA | NAO | 107.6° | 109.1° |
| SAS | CAV | CAB | 125.7° | 125.9° |
| SAS | CAV | CBB | 109.3° | 108.2° |
| CAL | CAK | FAF | 105.4° | 109.5° |
| CAL | CAK | H1 | 110.5° | 109.5° |
| CAL | CAK | H2 | 110.5° | 109.5° |
| CAK | CAL | H3 | 109.9° | 109.5° |
| CAK | CAL | H4 | 110.0° | 109.5° |
| FAF | CAK | H1 | 110.5° | 109.5° |
| FAF | CAK | H2 | 110.5° | 109.4° |
| CBA | NAO | CBB | 112.1° | 117.0° |
| CAB | CAV | CBB | 125.1° | 125.9° |
| CAV | CAB | H11 | 109.5° | 109.4° |
| CAV | CAB | H12 | 109.5° | 109.4° |
| CAV | CAB | H13 | 109.5° | 109.4° |
| CAV | CBB | NAO | 116.0° | 115.9° |
| CAV | CBB | CBC | 119.8° | 122.0° |
| NAO | CBB | CBC | 124.1° | 122.1° |
| CBB | CBC | CAC | 110.7° | 109.4° |
| CBB | CBC | SAR | 109.4° | 109.5° |
| CBB | CBC | H14 | 109.2° | 109.5° |
| CAC | CBC | SAR | 112.1° | 109.5° |
| CAC | CBC | H14 | 109.0° | 109.5° |
| CBC | CAC | H15 | 109.5° | 109.5° |
| CBC | CAC | H16 | 109.5° | 109.5° |
| CBC | CAC | H17 | 109.5° | 109.5° |
| CBC | SAR | C2 | 101.8° | 100.0° |
| SAR | CBC | H14 | 106.3° | 109.5° |
| SAR | C2 | N3 | 123.8° | 119.1° |
| SAR | C2 | N1 | 115.2° | 119.2° |
| C2 | N3 | C4 | 119.7° | 120.8° |
| N3 | C2 | N1 | 121.0° | 121.7° |
| N3 | C4 | NAE | 120.7° | 120.5° |
| N3 | C4 | C5 | 119.9° | 119.1° |
| NAE | C4 | C5 | 119.4° | 120.4° |
| C4 | NAE | H21 | 109.5° | 120.0° |
| C4 | NAE | H22 | 109.4° | 120.0° |
| C2 | N1 | C6 | 120.9° | 120.9° |
| C4 | C5 | C6 | 118.0° | 118.4° |
| C4 | C5 | H20 | 121.0° | 120.8° |
| N1 | C6 | C5 | 120.5° | 119.1° |
| N1 | C6 | NAD | 118.4° | 120.5° |
| C5 | C6 | NAD | 121.2° | 120.4° |
| C6 | C5 | H20 | 121.0° | 120.8° |
| C6 | NAD | H18 | 109.5° | 120.0° |
| C6 | NAD | H19 | 109.5° | 120.0° |
| H1 | CAK | H2 | 109.5° | 109.4° |
| H3 | CAL | H4 | 109.5° | 109.5° |
| H6 | CAA | H7 | 109.5° | 109.5° |
| H6 | CAA | H8 | 109.5° | 109.4° |
| H7 | CAA | H8 | 109.5° | 109.5° |
| H11 | CAB | H12 | 109.5° | 109.5° |
| H11 | CAB | H13 | 109.4° | 109.5° |
| H12 | CAB | H13 | 109.5° | 109.5° |
| H15 | CAC | H16 | 109.5° | 109.4° |
| H15 | CAC | H17 | 109.4° | 109.5° |
| H16 | CAC | H17 | 109.5° | 109.5° |
| H18 | NAD | H19 | 109.4° | 120.0° |
| H21 | NAE | H22 | 109.5° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CAA | OAP | CAX | CAH | 5.9° | 0.1° |
| CAA | OAP | CAX | CAY | 174.9° | 180.0° |
| OAP | CAA | H6 | H7 | 120.0° | 120.0° |
| OAP | CAA | H6 | H8 | 120.0° | 119.9° |
| OAP | CAA | H7 | H8 | 120.0° | 120.0° |
| OAP | CAX | CAH | CAY | 179.2° | 180.0° |
| OAP | CAX | CAH | CAG | 179.8° | 180.0° |
| OAP | CAX | CAY | OAQ | 1.0° | 0.0° |
| OAP | CAX | CAY | CAJ | 179.6° | 179.7° |
| CAX | OAP | CAA | H6 | 180.0° | 180.0° |
| CAX | OAP | CAA | H7 | 60.0° | 60.0° |
| CAX | OAP | CAA | H8 | 60.0° | 60.1° |
| OAP | CAX | CAH | H9 | 0.2° | 0.0° |
| CAX | CAH | CAG | H9 | 180.0° | 180.0° |
| CAX | CAH | CAG | CAW | 1.4° | 0.2° |
| CAH | CAX | CAY | OAQ | 179.7° | 179.9° |
| CAH | CAX | CAY | CAJ | 0.3° | 0.3° |
| CAX | CAH | CAG | H10 | 178.6° | 180.0° |
| CAG | CAH | CAX | CAY | 0.6° | 0.0° |
| CAH | CAG | CAW | H10 | 180.0° | 179.8° |
| CAH | CAG | CAW | CAJ | 1.9° | 0.2° |
| CAH | CAG | CAW | CBA | 178.4° | 180.0° |
| CAX | CAY | OAQ | CAJ | 179.4° | 179.6° |
| CAX | CAY | OAQ | CAL | 157.7° | 179.7° |
| CAX | CAY | CAJ | CAW | 0.9° | 0.3° |
| CAX | CAY | CAJ | H5 | 179.1° | 179.8° |
| CAY | CAX | CAH | H9 | 179.4° | 180.0° |
| CAG | CAW | CAJ | CAY | 1.7° | 0.1° |
| CAG | CAW | CAJ | CBA | 176.4° | 179.8° |
| CAG | CAW | CBA | SAS | 19.5° | 179.7° |
| CAG | CAW | CBA | NAO | 163.8° | 0.1° |
| CAG | CAW | CAJ | H5 | 178.3° | 180.0° |
| CAW | CAG | CAH | H9 | 178.6° | 179.7° |
| OAQ | CAY | CAJ | CAW | 179.8° | 180.0° |
| CAY | OAQ | CAL | CAK | 178.1° | 180.0° |
| CAY | OAQ | CAL | H3 | 62.2° | 60.0° |
| CAY | OAQ | CAL | H4 | 58.4° | 60.1° |
| OAQ | CAY | CAJ | H5 | 0.2° | 0.1° |
| CAJ | CAY | OAQ | CAL | 22.9° | 0.1° |
| CAY | CAJ | CAW | H5 | 180.0° | 179.9° |
| CAY | CAJ | CAW | CBA | 178.0° | 179.7° |
| OAQ | CAL | CAK | H3 | 119.7° | 120.0° |
| OAQ | CAL | CAK | H4 | 119.7° | 120.0° |
| OAQ | CAL | CAK | FAF | 142.1° | 65.0° |
| OAQ | CAL | CAK | H1 | 22.8° | 55.0° |
| OAQ | CAL | CAK | H2 | 98.5° | 175.0° |
| OAQ | CAL | H3 | H4 | 120.9° | 120.0° |
| CAJ | CAW | CBA | SAS | 156.9° | 0.1° |
| CAJ | CAW | CBA | NAO | 19.8° | 179.7° |
| CAJ | CAW | CAG | H10 | 178.1° | 180.0° |
| CAW | CBA | SAS | NAO | 177.3° | 179.7° |
| CAW | CBA | SAS | CAV | 178.3° | 180.0° |
| CAW | CBA | NAO | CBB | 177.5° | 180.0° |
| CBA | CAW | CAJ | H5 | 2.0° | 0.2° |
| CBA | CAW | CAG | H10 | 1.6° | 0.2° |
| CBA | SAS | CAV | CAB | 178.8° | 180.0° |
| CBA | SAS | CAV | CBB | 1.5° | 0.2° |
| SAS | CBA | NAO | CBB | 0.3° | 0.3° |
| CAV | SAS | CBA | NAO | 1.1° | 0.3° |
| SAS | CAV | CAB | CBB | 179.6° | 179.8° |
| SAS | CAV | CBB | NAO | 1.7° | 0.1° |
| SAS | CAV | CBB | CBC | 179.3° | 179.9° |
| SAS | CAV | CAB | H11 | 0.0° | 0.0° |
| SAS | CAV | CAB | H12 | 120.0° | 119.9° |
| SAS | CAV | CAB | H13 | 120.0° | 120.1° |
| CAL | CAK | FAF | H1 | 119.3° | 120.0° |
| CAL | CAK | FAF | H2 | 119.4° | 120.1° |
| CAL | CAK | H1 | H2 | 121.9° | 120.1° |
| CAK | CAL | H3 | H4 | 120.9° | 120.0° |
| FAF | CAK | H1 | H2 | 121.9° | 119.9° |
| FAF | CAK | CAL | H3 | 98.2° | 175.0° |
| FAF | CAK | CAL | H4 | 22.4° | 55.0° |
| CBA | NAO | CBB | CAV | 0.8° | 0.1° |
| CBA | NAO | CBB | CBC | 179.8° | 179.9° |
| CAB | CAV | CBB | NAO | 178.6° | 179.9° |
| CAB | CAV | CBB | CBC | 0.4° | 0.0° |
| CAV | CAB | H11 | H12 | 120.0° | 119.9° |
| CAV | CAB | H11 | H13 | 120.0° | 120.0° |
| CAV | CAB | H12 | H13 | 120.0° | 120.0° |
| CAV | CBB | NAO | CBC | 179.0° | 179.9° |
| CAV | CBB | CBC | CAC | 147.0° | 104.9° |
| CAV | CBB | CBC | SAR | 89.0° | 135.1° |
| CBB | CAV | CAB | H11 | 179.6° | 179.8° |
| CBB | CAV | CAB | H12 | 60.3° | 60.3° |
| CBB | CAV | CAB | H13 | 59.7° | 59.7° |
| CAV | CBB | CBC | H14 | 27.0° | 15.1° |
| NAO | CBB | CBC | CAC | 34.1° | 75.0° |
| NAO | CBB | CBC | SAR | 90.0° | 45.0° |
| NAO | CBB | CBC | H14 | 154.1° | 165.0° |
| CBB | CBC | CAC | SAR | 122.4° | 120.0° |
| CBB | CBC | CAC | H14 | 120.1° | 120.0° |
| CBB | CBC | SAR | H14 | 117.8° | 120.0° |
| CBB | CBC | SAR | C2 | 171.0° | 175.0° |
| CBB | CBC | CAC | H15 | 180.0° | 60.0° |
| CBB | CBC | CAC | H16 | 60.0° | 60.0° |
| CBB | CBC | CAC | H17 | 60.0° | 180.0° |
| CAC | CBC | SAR | H14 | 119.1° | 120.0° |
| CAC | CBC | SAR | C2 | 65.8° | 65.0° |
| CBC | CAC | H15 | H16 | 120.0° | 120.0° |
| CBC | CAC | H15 | H17 | 120.0° | 120.0° |
| CBC | CAC | H16 | H17 | 120.0° | 120.0° |
| CBC | SAR | C2 | N3 | 29.1° | 0.3° |
| CBC | SAR | C2 | N1 | 151.0° | 180.0° |
| SAR | CBC | CAC | H15 | 57.6° | 60.0° |
| SAR | CBC | CAC | H16 | 62.5° | 180.0° |
| SAR | CBC | CAC | H17 | 177.6° | 60.0° |
| SAR | C2 | N3 | N1 | 179.9° | 179.7° |
| SAR | C2 | N3 | C4 | 179.6° | 180.0° |
| SAR | C2 | N1 | C6 | 179.5° | 180.0° |
| C2 | SAR | CBC | H14 | 53.3° | 55.0° |
| C2 | N3 | C4 | NAE | 179.8° | 180.0° |
| C2 | N3 | C4 | C5 | 0.1° | 0.0° |
| N3 | C2 | N1 | C6 | 0.5° | 0.3° |
| N3 | C4 | NAE | C5 | 179.9° | 179.9° |
| C4 | N3 | C2 | N1 | 0.3° | 0.2° |
| N3 | C4 | C5 | C6 | 0.1° | 0.3° |
| N3 | C4 | C5 | H20 | 179.9° | 180.0° |
| N3 | C4 | NAE | H21 | 0.0° | 0.1° |
| N3 | C4 | NAE | H22 | 120.0° | 180.0° |
| NAE | C4 | C5 | C6 | 179.8° | 179.8° |
| NAE | C4 | C5 | H20 | 0.2° | 0.0° |
| C4 | NAE | H21 | H22 | 120.0° | 180.0° |
| C2 | N1 | C6 | C5 | 0.4° | 0.0° |
| C2 | N1 | C6 | NAD | 179.2° | 180.0° |
| C4 | C5 | C6 | N1 | 0.3° | 0.3° |
| C4 | C5 | C6 | H20 | 180.0° | 179.7° |
| C4 | C5 | C6 | NAD | 179.4° | 179.7° |
| C5 | C4 | NAE | H21 | 179.9° | 180.0° |
| C5 | C4 | NAE | H22 | 59.9° | 0.0° |
| N1 | C6 | C5 | NAD | 179.6° | 180.0° |
| N1 | C6 | NAD | H18 | 0.0° | 0.1° |
| N1 | C6 | NAD | H19 | 120.0° | 180.0° |
| N1 | C6 | C5 | H20 | 179.7° | 180.0° |
| C5 | C6 | NAD | H18 | 179.6° | 180.0° |
| C5 | C6 | NAD | H19 | 60.4° | 0.0° |
| C6 | NAD | H18 | H19 | 120.0° | 179.9° |
| NAD | C6 | C5 | H20 | 0.7° | 0.0° |
| H1 | CAK | CAL | H3 | 142.5° | 65.0° |
| H1 | CAK | CAL | H4 | 96.9° | 175.0° |
| H2 | CAK | CAL | H3 | 21.2° | 55.0° |
| H2 | CAK | CAL | H4 | 141.8° | 65.0° |
| H6 | CAA | H7 | H8 | 120.0° | 120.0° |
| H9 | CAH | CAG | H10 | 1.4° | 0.0° |
| H11 | CAB | H12 | H13 | 120.0° | 120.1° |
| H14 | CBC | CAC | H15 | 59.9° | 179.9° |
| H14 | CBC | CAC | H16 | 179.9° | 60.0° |
| H14 | CBC | CAC | H17 | 60.1° | 60.1° |
| H15 | CAC | H16 | H17 | 120.0° | 120.0° |
