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2VP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C19C9sing1.51Å1.53Å
C10C9doub1.36Å1.38Å
C10C11sing1.40Å1.47Å
C12C11doub1.37Å1.40Å
C12C13sing1.40Å1.46Å
C9C8sing1.41Å1.48Å
C14C13doub1.36Å1.40Å
C14C15sing1.41Å1.46Å
C13C20sing1.51Å1.53Å
O2C15doub1.22Å1.25Å
C2'C1'sing1.53Å1.53Å
C2'C7sing1.51Å1.54Å
C15O1sing1.35Å1.25Å
C8C7doub1.35Å1.38Å
C1'C18sing1.53Å1.53Å
C7C6sing1.47Å1.45Å
C18C5sing1.50Å1.52Å
C6C5doub1.40Å1.41ÅAromatic
C6C1sing1.40Å1.38ÅAromatic
C5C4sing1.38Å1.38ÅAromatic
C1C2doub1.38Å1.40ÅAromatic
C4C3doub1.38Å1.39ÅAromatic
C2C3sing1.38Å1.38ÅAromatic
C2C7'sing1.51Å1.53Å
C2'H1sing1.09Å1.10Å
C2'H2sing1.09Å1.10Å
C1'H3sing1.09Å1.10Å
C1'H4sing1.09Å1.10Å
C18H5sing1.09Å1.10Å
C18H6sing1.09Å1.10Å
C4H7sing1.08Å1.08Å
C3H8sing1.08Å1.08Å
C7'H9sing1.09Å1.10Å
C7'H10sing1.09Å1.10Å
C7'H11sing1.09Å1.10Å
C1H12sing1.08Å1.08Å
C8H13sing1.08Å1.08Å
C19H14sing1.09Å1.10Å
C19H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C10H17sing1.08Å1.08Å
C11H18sing1.08Å1.08Å
C12H19sing1.08Å1.08Å
C20H20sing1.09Å1.10Å
C20H21sing1.09Å1.10Å
C20H22sing1.09Å1.10Å
C14H23sing1.08Å1.08Å
O1H24sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C19C9C10119.3°120.0°
C19C9C8119.0°120.0°
C9C19H14109.5°109.5°
C9C19H15109.5°109.4°
C9C19H16109.5°109.4°
C9C10C11123.3°120.0°
C10C9C8121.7°120.0°
C9C10H17118.3°120.0°
C10C11C12119.9°120.0°
C11C10H17118.3°120.0°
C10C11H18120.0°120.1°
C11C12C13121.1°120.0°
C12C11H18120.1°119.9°
C11C12H19119.5°119.9°
C12C13C14117.9°120.0°
C12C13C20120.4°120.0°
C13C12H19119.4°120.0°
C9C8C7123.2°120.0°
C9C8H13118.4°119.9°
C13C14C15124.7°120.0°
C14C13C20121.6°120.0°
C13C14H23117.6°120.0°
C14C15O2116.6°120.0°
C14C15O1119.6°120.0°
C15C14H23117.7°120.0°
C13C20H20109.5°109.5°
C13C20H21109.5°109.4°
C13C20H22109.5°109.4°
O2C15O1123.8°120.0°
C1'C2'C7112.4°107.4°
C2'C1'C18113.5°109.4°
C1'C2'H1108.7°109.9°
C1'C2'H2108.7°109.9°
C2'C1'H3108.5°109.5°
C2'C1'H4108.5°109.5°
C2'C7C8118.6°121.2°
C2'C7C6122.5°117.7°
C7C2'H1108.8°109.9°
C7C2'H2108.8°109.9°
C15O1H24109.5°114.0°
C8C7C6118.8°121.2°
C7C8H13118.4°120.0°
C1'C18C5112.5°111.2°
C18C1'H3108.5°109.5°
C18C1'H4108.5°109.5°
C1'C18H5108.7°109.1°
C1'C18H6108.7°109.1°
C7C6C5118.3°120.1°
C7C6C1122.0°119.7°
C18C5C6122.8°121.6°
C18C5C4118.3°119.1°
C5C18H5108.7°109.2°
C5C18H6108.7°109.2°
C5C6C1119.7°120.1°
C6C5C4119.0°119.3°
C6C1C2121.0°119.7°
C6C1H12119.5°120.1°
C5C4C3121.1°120.3°
C5C4H7119.5°119.8°
C1C2C3119.4°120.0°
C1C2C7'120.0°120.0°
C2C1H12119.5°120.2°
C4C3C2120.0°120.5°
C3C4H7119.5°119.8°
C4C3H8120.0°119.7°
C3C2C7'120.6°120.0°
C2C3H8120.0°119.8°
C2C7'H9109.5°109.5°
C2C7'H10109.5°109.5°
C2C7'H11109.5°109.5°
H1C2'H2109.5°109.9°
H3C1'H4109.5°109.5°
H5C18H6109.5°109.0°
H9C7'H10109.5°109.4°
H9C7'H11109.5°109.5°
H10C7'H11109.5°109.5°
H14C19H15109.5°109.5°
H14C19H16109.4°109.5°
H15C19H16109.5°109.5°
H20C20H21109.4°109.5°
H20C20H22109.5°109.5°
H21C20H22109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C19C9C10C8178.4°179.9°
C19C9C10C11177.9°180.0°
C19C9C8C756.9°58.5°
C19C9C8H13123.0°121.5°
C9C19H14H15120.0°120.0°
C9C19H14H16120.0°120.0°
C9C19H15H16120.0°119.9°
C19C9C10H172.1°0.0°
C9C10C11H17180.0°179.9°
C9C10C11C12172.3°180.0°
C10C9C8C7124.7°121.5°
C10C9C8H1355.4°58.5°
C10C9C19H14180.0°84.8°
C10C9C19H1560.0°35.3°
C10C9C19H1660.0°155.2°
C9C10C11H187.7°0.0°
C10C11C12H18180.0°180.0°
C10C11C12C13179.1°180.0°
C11C10C9C80.4°0.0°
C10C11C12H190.9°0.0°
C11C12C13H19180.0°180.0°
C11C12C13C14137.2°180.0°
C11C12C13C2043.8°0.0°
C12C11C10H177.7°0.0°
C12C13C14C20179.0°180.0°
C12C13C14C15179.5°171.8°
C13C12C11H180.9°0.0°
C12C13C20H20180.0°95.7°
C12C13C20H2160.0°144.3°
C12C13C20H2260.0°24.3°
C12C13C14H230.5°8.2°
C9C8C7C2'0.0°6.9°
C9C8C7H13180.0°180.0°
C9C8C7C6178.7°173.0°
C8C9C19H141.6°95.2°
C8C9C19H15121.6°144.8°
C8C9C19H16118.4°24.8°
C8C9C10H17179.5°179.9°
C13C14C15H23180.0°180.0°
C13C14C15O2152.2°3.5°
C13C14C15O125.9°176.6°
C14C13C12H1942.8°0.0°
C14C13C20H201.0°84.2°
C14C13C20H21119.0°35.8°
C14C13C20H22121.1°155.8°
C15C14C13C200.5°8.2°
C14C15O2O1178.1°179.9°
C14C15O1H24178.0°180.0°
C20C13C12H19136.2°180.0°
C13C20H20H21120.0°120.0°
C13C20H20H22120.0°120.0°
C13C20H21H22120.0°120.0°
C20C13C14H23179.5°171.8°
O2C15C14H2327.7°176.5°
O2C15O1H240.0°0.1°
C1'C2'C7H1120.4°119.4°
C1'C2'C7H2120.4°119.5°
C1'C2'C7C8162.0°137.5°
C2'C1'C18H3120.6°120.0°
C2'C1'C18H4120.6°120.0°
C1'C2'C7C619.4°42.6°
C2'C1'C18C548.0°54.6°
C1'C2'H1H2118.6°121.0°
C2'C1'H3H4118.2°120.0°
C2'C1'C18H5168.4°175.1°
C2'C1'C18H672.5°65.9°
C2'C7C8C6178.7°179.9°
C7C2'C1'C1844.3°64.0°
C2'C7C6C52.4°11.5°
C2'C7C6C1176.9°168.8°
C7C2'H1H2118.7°121.1°
C7C2'C1'H376.3°56.0°
C7C2'C1'H4164.9°176.0°
C2'C7C8H13179.9°173.0°
O1C15C14H23154.1°3.4°
C8C7C6C5176.2°168.6°
C8C7C6C14.4°11.1°
C8C7C2'H177.6°103.0°
C8C7C2'H241.6°18.0°
C1'C18C5H5120.4°120.5°
C1'C18C5H6120.4°120.4°
C1'C18C5C626.7°22.6°
C1'C18C5C4154.0°157.4°
C18C1'C2'H176.2°55.5°
C18C1'C2'H2164.7°176.5°
C18C1'H3H4118.2°120.1°
C1'C18H5H6118.6°119.1°
C7C6C5C181.4°0.6°
C7C6C5C1179.4°179.7°
C7C6C5C4179.3°179.5°
C7C6C1C2179.7°179.5°
C6C7C2'H1101.0°76.9°
C6C7C2'H2139.8°162.1°
C7C6C1H120.4°0.5°
C6C7C8H131.3°7.1°
C18C5C6C4179.3°180.0°
C18C5C6C1179.3°179.7°
C18C5C4C3178.2°179.8°
C5C18C1'H372.6°65.4°
C5C18C1'H4168.5°174.5°
C5C18H5H6118.6°119.1°
C18C5C4H71.7°0.2°
C5C6C1C21.0°0.2°
C6C5C4C31.1°0.1°
C6C5C18H5147.1°143.1°
C6C5C18H693.7°97.8°
C6C5C4H7178.9°179.9°
C5C6C1H12179.0°179.8°
C1C6C5C40.0°0.3°
C6C1C2H12180.0°180.0°
C6C1C2C31.0°0.1°
C6C1C2C7'179.2°180.0°
C5C4C3H7180.0°180.0°
C5C4C3C21.1°0.0°
C4C5C18H533.6°36.9°
C4C5C18H685.5°82.1°
C5C4C3H8178.9°180.0°
C1C2C3C40.1°0.1°
C1C2C3C7'179.8°180.0°
C1C2C3H8179.9°179.9°
C1C2C7'H989.9°89.9°
C1C2C7'H10150.1°30.0°
C1C2C7'H1130.1°150.0°
C4C3C2H8180.0°180.0°
C4C3C2C7'179.7°179.9°
C2C3C4H7178.9°179.9°
C3C2C7'H989.9°90.0°
C3C2C7'H1030.1°150.0°
C3C2C7'H11150.1°30.0°
C3C2C1H12179.0°180.0°
C7'C2C3H80.3°0.1°
C2C7'H9H10120.0°120.0°
C2C7'H9H11120.0°120.1°
C2C7'H10H11120.0°120.0°
C7'C2C1H120.8°0.0°
H1C2'C1'H3163.2°175.4°
H1C2'C1'H444.4°64.5°
H2C2'C1'H344.1°63.5°
H2C2'C1'H474.7°56.5°
H3C1'C18H547.8°55.1°
H3C1'C18H6166.9°174.1°
H4C1'C18H571.0°65.0°
H4C1'C18H648.1°54.1°
H7C4C3H81.1°0.1°
H9C7'H10H11120.0°120.0°
H14C19H15H16119.9°120.0°
H17C10C11H18172.3°180.0°
H18C11C12H19179.1°180.0°
H20C20H21H22120.0°120.0°

227111

PDB entries from 2024-11-06

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