2VA
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CG2 | CB | sing | 1.53Å | 1.53Å | |
| CG2 | HG21 | sing | 1.09Å | 1.12Å | |
| CG2 | HG22 | sing | 1.09Å | 1.11Å | |
| CG2 | HG23 | sing | 1.09Å | 1.12Å | |
| CB | CG1 | sing | 1.53Å | 1.53Å | |
| CB | CA | sing | 1.53Å | 1.53Å | |
| CB | HB | sing | 1.09Å | 1.11Å | |
| CG1 | HG11 | sing | 1.09Å | 1.12Å | |
| CG1 | HG12 | sing | 1.09Å | 1.12Å | |
| CG1 | HG13 | sing | 1.09Å | 1.12Å | |
| CA | N | sing | 1.47Å | 1.47Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.11Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | NAZ | sing | 1.35Å | 1.33Å | |
| NAZ | C2' | sing | 1.46Å | 1.47Å | |
| NAZ | HAZ | sing | 0.97Å | 1.02Å | |
| C2' | C3' | sing | 1.55Å | 1.53Å | |
| C2' | C1' | sing | 1.55Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | H1 | sing | 0.97Å | 0.95Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| O5' | H5' | sing | 0.97Å | 0.95Å | |
| O4' | C1' | sing | 1.44Å | 1.44Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N9 | C8 | sing | 1.36Å | 1.33Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.33Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.33Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.35Å | 1.33Å | Aromatic |
| C5 | C4 | doub | 1.41Å | 1.39Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.39Å | Aromatic |
| C4 | N3 | sing | 1.33Å | 1.34Å | Aromatic |
| N3 | C2 | doub | 1.32Å | 1.32Å | Aromatic |
| C2 | N1 | sing | 1.32Å | 1.32Å | Aromatic |
| C2 | HC2 | sing | 1.08Å | 1.10Å | |
| N1 | C6 | doub | 1.33Å | 1.34Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.33Å | |
| N6 | HN61 | sing | 0.97Å | 1.02Å | |
| N6 | HN62 | sing | 0.97Å | 1.02Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CB | CG2 | HG21 | 112.0° | 109.5° |
| CB | CG2 | HG22 | 109.9° | 109.5° |
| CB | CG2 | HG23 | 112.1° | 109.5° |
| CG2 | CB | CG1 | 109.9° | 109.5° |
| CG2 | CB | CA | 112.3° | 109.5° |
| CG2 | CB | HB | 107.5° | 109.5° |
| HG21 | CG2 | HG22 | 112.0° | 109.4° |
| HG21 | CG2 | HG23 | 98.3° | 109.5° |
| HG22 | CG2 | HG23 | 112.0° | 109.4° |
| CG1 | CB | CA | 110.2° | 109.5° |
| CG1 | CB | HB | 109.6° | 109.4° |
| CB | CG1 | HG11 | 112.0° | 109.5° |
| CB | CG1 | HG12 | 109.9° | 109.4° |
| CB | CG1 | HG13 | 112.0° | 109.5° |
| CA | CB | HB | 107.1° | 109.5° |
| CB | CA | N | 109.4° | 109.5° |
| CB | CA | C | 111.3° | 109.4° |
| CB | CA | HA | 107.6° | 109.4° |
| HG11 | CG1 | HG12 | 112.0° | 109.5° |
| HG11 | CG1 | HG13 | 98.3° | 109.5° |
| HG12 | CG1 | HG13 | 112.1° | 109.5° |
| N | CA | C | 107.5° | 109.5° |
| N | CA | HA | 111.5° | 109.5° |
| CA | N | H | 112.2° | 106.7° |
| CA | N | H2 | 109.4° | 106.7° |
| C | CA | HA | 109.6° | 109.5° |
| CA | C | O | 119.8° | 120.0° |
| CA | C | NAZ | 116.1° | 120.0° |
| H | N | H2 | 112.2° | 106.7° |
| O | C | NAZ | 124.1° | 120.0° |
| C | NAZ | C2' | 121.6° | 120.0° |
| C | NAZ | HAZ | 114.0° | 120.0° |
| C2' | NAZ | HAZ | 124.3° | 120.0° |
| NAZ | C2' | C3' | 113.3° | 110.9° |
| NAZ | C2' | C1' | 108.3° | 110.9° |
| NAZ | C2' | H2' | 105.3° | 110.8° |
| C3' | C2' | C1' | 101.1° | 102.2° |
| C3' | C2' | H2' | 112.1° | 110.9° |
| C2' | C3' | O3' | 112.0° | 110.5° |
| C2' | C3' | C4' | 100.4° | 104.2° |
| C2' | C3' | H3' | 114.6° | 110.5° |
| C1' | C2' | H2' | 116.9° | 110.9° |
| C2' | C1' | O4' | 106.9° | 103.4° |
| C2' | C1' | N9 | 113.6° | 110.8° |
| C2' | C1' | H1' | 108.3° | 110.6° |
| O3' | C3' | C4' | 111.8° | 110.6° |
| O3' | C3' | H3' | 103.7° | 110.4° |
| C3' | O3' | H1 | 112.0° | 106.8° |
| C4' | C3' | H3' | 114.7° | 110.5° |
| C3' | C4' | C5' | 108.0° | 109.9° |
| C3' | C4' | O4' | 101.4° | 107.3° |
| C3' | C4' | H4' | 115.6° | 109.9° |
| C5' | C4' | O4' | 109.9° | 110.0° |
| C5' | C4' | H4' | 107.9° | 109.9° |
| C4' | C5' | O5' | 110.4° | 109.4° |
| C4' | C5' | H5'1 | 111.9° | 109.5° |
| C4' | C5' | H5'2 | 111.9° | 109.5° |
| O4' | C4' | H4' | 113.8° | 109.9° |
| C4' | O4' | C1' | 108.1° | 107.0° |
| O5' | C5' | H5'1 | 111.9° | 109.4° |
| O5' | C5' | H5'2 | 111.8° | 109.5° |
| C5' | O5' | H5' | 110.4° | 106.8° |
| H5'1 | C5' | H5'2 | 98.6° | 109.5° |
| O4' | C1' | N9 | 108.9° | 110.6° |
| O4' | C1' | H1' | 113.1° | 110.6° |
| N9 | C1' | H1' | 106.3° | 110.6° |
| C1' | N9 | C8 | 127.3° | 126.3° |
| C1' | N9 | C4 | 124.8° | 126.2° |
| C8 | N9 | C4 | 107.8° | 107.5° |
| N9 | C8 | N7 | 109.8° | 110.0° |
| N9 | C8 | H8 | 125.2° | 125.0° |
| N9 | C4 | C5 | 107.2° | 106.0° |
| N9 | C4 | N3 | 132.9° | 134.9° |
| N7 | C8 | H8 | 125.1° | 125.0° |
| C8 | N7 | C5 | 107.8° | 109.4° |
| N7 | C5 | C4 | 107.3° | 107.2° |
| N7 | C5 | C6 | 134.6° | 134.7° |
| C4 | C5 | C6 | 118.0° | 118.2° |
| C5 | C4 | N3 | 119.8° | 119.1° |
| C5 | C6 | N1 | 118.9° | 118.5° |
| C5 | C6 | N6 | 120.9° | 120.8° |
| C4 | N3 | C2 | 120.6° | 120.6° |
| N3 | C2 | N1 | 121.2° | 122.5° |
| N3 | C2 | HC2 | 119.4° | 118.7° |
| N1 | C2 | HC2 | 119.3° | 118.8° |
| C2 | N1 | C6 | 121.5° | 121.2° |
| N1 | C6 | N6 | 120.2° | 120.8° |
| C6 | N6 | HN61 | 108.1° | 120.0° |
| C6 | N6 | HN62 | 120.9° | 120.0° |
| HN61 | N6 | HN62 | 108.1° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CB | CG2 | HG21 | HG22 | 124.1° | 120.0° |
| CB | CG2 | HG21 | HG23 | 118.0° | 120.0° |
| CB | CG2 | HG22 | HG23 | 125.3° | 120.0° |
| CG2 | CB | CG1 | CA | 124.4° | 120.0° |
| CG2 | CB | CG1 | HB | 117.9° | 120.0° |
| CG2 | CB | CA | HB | 117.8° | 120.0° |
| CG2 | CB | CG1 | HG11 | 54.7° | 60.0° |
| CG2 | CB | CG1 | HG12 | 180.0° | 60.0° |
| CG2 | CB | CG1 | HG13 | 54.7° | 180.0° |
| CG2 | CB | CA | N | 177.9° | 60.0° |
| CG2 | CB | CA | C | 59.3° | 180.0° |
| CG2 | CB | CA | HA | 60.8° | 60.0° |
| HG21 | CG2 | HG22 | HG23 | 109.4° | 120.0° |
| HG21 | CG2 | CB | CG1 | 54.7° | 60.0° |
| HG21 | CG2 | CB | CA | 177.9° | 180.0° |
| HG21 | CG2 | CB | HB | 64.6° | 60.0° |
| HG22 | CG2 | CB | CG1 | 180.0° | 180.0° |
| HG22 | CG2 | CB | CA | 56.9° | 60.0° |
| HG22 | CG2 | CB | HB | 60.7° | 60.0° |
| HG23 | CG2 | CB | CG1 | 54.7° | 60.0° |
| HG23 | CG2 | CB | CA | 68.4° | 60.0° |
| HG23 | CG2 | CB | HB | 174.0° | 180.0° |
| CG1 | CB | CA | HB | 119.2° | 120.0° |
| CB | CG1 | HG11 | HG12 | 124.1° | 120.0° |
| CB | CG1 | HG11 | HG13 | 117.9° | 120.0° |
| CB | CG1 | HG12 | HG13 | 125.3° | 120.0° |
| CG1 | CB | CA | N | 59.1° | 60.0° |
| CG1 | CB | CA | C | 177.8° | 60.0° |
| CG1 | CB | CA | HA | 62.1° | 180.0° |
| CA | CB | CG1 | HG11 | 69.6° | 180.0° |
| CA | CB | CG1 | HG12 | 55.6° | 60.0° |
| CA | CB | CG1 | HG13 | 179.1° | 60.0° |
| CB | CA | N | C | 121.0° | 119.9° |
| CB | CA | N | HA | 118.9° | 120.0° |
| CB | CA | C | HA | 118.9° | 119.9° |
| CB | CA | N | H | 54.7° | 59.9° |
| CB | CA | N | H2 | 180.0° | 53.8° |
| CB | CA | C | O | 53.2° | 100.1° |
| CB | CA | C | NAZ | 125.4° | 80.0° |
| HB | CB | CG1 | HG11 | 172.7° | 60.0° |
| HB | CB | CG1 | HG12 | 62.1° | 180.0° |
| HB | CB | CG1 | HG13 | 63.2° | 60.0° |
| HB | CB | CA | N | 60.1° | 180.0° |
| HB | CB | CA | C | 58.5° | 60.0° |
| HB | CB | CA | HA | 178.6° | 60.0° |
| HG11 | CG1 | HG12 | HG13 | 109.5° | 120.0° |
| N | CA | C | HA | 121.3° | 120.1° |
| CA | N | H | H2 | 123.7° | 113.8° |
| N | CA | C | O | 66.6° | 19.9° |
| N | CA | C | NAZ | 114.8° | 160.0° |
| C | CA | N | H | 175.8° | 60.0° |
| C | CA | N | H2 | 59.0° | 173.8° |
| CA | C | O | NAZ | 178.5° | 179.9° |
| CA | C | NAZ | C2' | 177.5° | 180.0° |
| CA | C | NAZ | HAZ | 2.5° | 0.0° |
| HA | CA | N | H | 64.2° | 179.9° |
| HA | CA | N | H2 | 61.1° | 66.2° |
| HA | CA | C | O | 172.1° | 140.0° |
| HA | CA | C | NAZ | 6.5° | 39.9° |
| O | C | NAZ | C2' | 4.0° | 0.1° |
| O | C | NAZ | HAZ | 176.0° | 179.9° |
| C | NAZ | C2' | HAZ | 180.0° | 180.0° |
| C | NAZ | C2' | C3' | 117.1° | 89.3° |
| C | NAZ | C2' | C1' | 131.6° | 157.9° |
| C | NAZ | C2' | H2' | 5.8° | 34.3° |
| NAZ | C2' | C3' | C1' | 115.7° | 118.2° |
| NAZ | C2' | C3' | H2' | 119.1° | 123.5° |
| NAZ | C2' | C1' | H2' | 118.7° | 123.5° |
| NAZ | C2' | C3' | O3' | 42.4° | 20.3° |
| NAZ | C2' | C3' | C4' | 76.4° | 139.1° |
| NAZ | C2' | C3' | H3' | 160.1° | 102.2° |
| NAZ | C2' | C1' | O4' | 100.4° | 155.2° |
| NAZ | C2' | C1' | N9 | 139.5° | 86.2° |
| NAZ | C2' | C1' | H1' | 21.7° | 36.8° |
| HAZ | NAZ | C2' | C3' | 62.9° | 90.7° |
| HAZ | NAZ | C2' | C1' | 48.4° | 22.1° |
| HAZ | NAZ | C2' | H2' | 174.2° | 145.7° |
| C3' | C2' | C1' | H2' | 122.0° | 118.2° |
| C2' | C3' | O3' | C4' | 111.8° | 114.8° |
| C2' | C3' | O3' | H3' | 124.0° | 122.6° |
| C2' | C3' | C4' | H3' | 123.4° | 118.7° |
| C2' | C3' | O3' | H1 | 180.0° | 180.0° |
| C2' | C3' | C4' | C5' | 162.2° | 121.6° |
| C2' | C3' | C4' | O4' | 46.7° | 2.0° |
| C2' | C3' | C4' | H4' | 76.9° | 117.4° |
| C3' | C2' | C1' | O4' | 18.9° | 36.9° |
| C3' | C2' | C1' | N9 | 101.1° | 155.5° |
| C3' | C2' | C1' | H1' | 141.1° | 81.5° |
| C1' | C2' | C3' | O3' | 158.1° | 98.0° |
| C1' | C2' | C3' | C4' | 39.3° | 20.9° |
| C1' | C2' | C3' | H3' | 84.2° | 139.5° |
| C2' | C1' | O4' | C4' | 10.7° | 40.0° |
| C2' | C1' | O4' | N9 | 123.1° | 118.7° |
| C2' | C1' | O4' | H1' | 119.1° | 118.4° |
| C2' | C1' | N9 | H1' | 119.0° | 123.0° |
| C2' | C1' | N9 | C8 | 35.8° | 90.6° |
| C2' | C1' | N9 | C4 | 146.3° | 89.2° |
| H2' | C2' | C3' | O3' | 76.7° | 143.8° |
| H2' | C2' | C3' | C4' | 164.5° | 97.3° |
| H2' | C2' | C3' | H3' | 41.0° | 21.3° |
| H2' | C2' | C1' | O4' | 140.9° | 81.3° |
| H2' | C2' | C1' | N9 | 20.8° | 37.3° |
| H2' | C2' | C1' | H1' | 97.0° | 160.3° |
| O3' | C3' | C4' | H3' | 117.7° | 122.6° |
| O3' | C3' | C4' | C5' | 78.9° | 119.6° |
| O3' | C3' | C4' | O4' | 165.6° | 120.7° |
| O3' | C3' | C4' | H4' | 42.0° | 1.3° |
| C4' | C3' | O3' | H1 | 68.2° | 65.2° |
| C3' | C4' | C5' | O4' | 109.8° | 117.9° |
| C3' | C4' | C5' | H4' | 125.6° | 121.0° |
| C3' | C4' | O4' | H4' | 124.8° | 119.4° |
| C3' | C4' | C5' | O5' | 179.6° | 175.0° |
| C3' | C4' | C5' | H5'1 | 55.1° | 55.0° |
| C3' | C4' | C5' | H5'2 | 54.4° | 65.0° |
| C3' | C4' | O4' | C1' | 35.9° | 26.5° |
| H3' | C3' | O3' | H1 | 56.0° | 57.5° |
| H3' | C3' | C4' | C5' | 38.8° | 2.9° |
| H3' | C3' | C4' | O4' | 76.7° | 116.7° |
| H3' | C3' | C4' | H4' | 159.7° | 123.9° |
| C5' | C4' | O4' | H4' | 121.1° | 121.1° |
| C4' | C5' | O5' | H5'1 | 125.2° | 120.0° |
| C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
| C4' | C5' | H5'1 | H5'2 | 117.8° | 120.1° |
| C4' | C5' | O5' | H5' | 180.0° | 180.0° |
| C5' | C4' | O4' | C1' | 150.0° | 146.0° |
| O4' | C4' | C5' | O5' | 70.5° | 67.1° |
| O4' | C4' | C5' | H5'1 | 54.7° | 173.0° |
| O4' | C4' | C5' | H5'2 | 164.2° | 52.9° |
| C4' | O4' | C1' | N9 | 133.8° | 158.7° |
| C4' | O4' | C1' | H1' | 108.4° | 78.4° |
| H4' | C4' | C5' | O5' | 54.1° | 54.0° |
| H4' | C4' | C5' | H5'1 | 179.3° | 66.0° |
| H4' | C4' | C5' | H5'2 | 71.2° | 174.0° |
| H4' | C4' | O4' | C1' | 88.8° | 92.9° |
| O5' | C5' | H5'1 | H5'2 | 117.8° | 120.0° |
| H5'1 | C5' | O5' | H5' | 54.8° | 60.0° |
| H5'2 | C5' | O5' | H5' | 54.7° | 60.0° |
| O4' | C1' | N9 | H1' | 122.1° | 122.9° |
| O4' | C1' | N9 | C8 | 83.2° | 23.5° |
| O4' | C1' | N9 | C4 | 94.7° | 156.7° |
| C1' | N9 | C8 | C4 | 178.2° | 179.8° |
| C1' | N9 | C8 | N7 | 177.6° | 180.0° |
| C1' | N9 | C8 | H8 | 2.4° | 0.1° |
| C1' | N9 | C4 | C5 | 177.8° | 179.9° |
| C1' | N9 | C4 | N3 | 4.7° | 0.7° |
| H1' | C1' | N9 | C8 | 154.7° | 146.4° |
| H1' | C1' | N9 | C4 | 27.4° | 33.8° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| N9 | C8 | N7 | C5 | 0.4° | 0.0° |
| C8 | N9 | C4 | C5 | 0.5° | 0.4° |
| C8 | N9 | C4 | N3 | 177.1° | 179.5° |
| C4 | N9 | C8 | N7 | 0.6° | 0.2° |
| C4 | N9 | C8 | H8 | 179.4° | 179.8° |
| N9 | C4 | C5 | N7 | 0.2° | 0.3° |
| N9 | C4 | C5 | N3 | 177.9° | 179.3° |
| N9 | C4 | C5 | C6 | 177.8° | 179.8° |
| N9 | C4 | N3 | C2 | 177.0° | 179.6° |
| C8 | N7 | C5 | C4 | 0.1° | 0.2° |
| C8 | N7 | C5 | C6 | 176.9° | 180.0° |
| H8 | C8 | N7 | C5 | 179.6° | 179.9° |
| N7 | C5 | C4 | C6 | 177.6° | 179.8° |
| N7 | C5 | C4 | N3 | 177.7° | 179.7° |
| N7 | C5 | C6 | N1 | 176.6° | 180.0° |
| N7 | C5 | C6 | N6 | 3.6° | 0.0° |
| C5 | C4 | N3 | C2 | 0.3° | 0.5° |
| C4 | C5 | C6 | N1 | 0.2° | 0.2° |
| C4 | C5 | C6 | N6 | 179.6° | 179.7° |
| C6 | C5 | C4 | N3 | 0.1° | 0.5° |
| C5 | C6 | N1 | C2 | 0.3° | 0.0° |
| C5 | C6 | N1 | N6 | 179.8° | 179.9° |
| C5 | C6 | N6 | HN61 | 54.7° | 0.0° |
| C5 | C6 | N6 | HN62 | 180.0° | 180.0° |
| C4 | N3 | C2 | N1 | 0.2° | 0.3° |
| C4 | N3 | C2 | HC2 | 179.8° | 179.7° |
| N3 | C2 | N1 | HC2 | 180.0° | 180.0° |
| N3 | C2 | N1 | C6 | 0.1° | 0.0° |
| C2 | N1 | C6 | N6 | 179.5° | 180.0° |
| HC2 | C2 | N1 | C6 | 179.9° | 180.0° |
| N1 | C6 | N6 | HN61 | 125.5° | 180.0° |
| N1 | C6 | N6 | HN62 | 0.3° | 0.1° |
| C6 | N6 | HN61 | HN62 | 132.5° | 179.9° |
