Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2V5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C30C31doub1.38Å1.40ÅAromatic
C30C29sing1.38Å1.40ÅAromatic
C31C32sing1.38Å1.42ÅAromatic
C29C28doub1.38Å1.43ÅAromatic
C32C27doub1.38Å1.34ÅAromatic
C28C27sing1.38Å1.40ÅAromatic
C27S24sing1.76Å1.78Å
O25S24doub1.42Å1.45Å
S24C23sing1.76Å1.78Å
S24O26doub1.42Å1.46Å
C23C22doub1.31Å1.53Å
O13N14sing1.42Å1.31Å
O13C12sing1.43Å1.43Å
N17C15doub1.30Å1.40Å
C11C12sing1.53Å1.44Å
C11C10sing1.53Å1.57Å
N14C15sing1.38Å1.41Å
C15N16sing1.37Å1.33Å
C10C09sing1.53Å1.56Å
C22C21sing1.51Å1.51Å
N20C21sing1.47Å1.44Å
N20C18sing1.35Å1.36Å
C09C18sing1.51Å1.53Å
C09N08sing1.47Å1.44Å
C33C21sing1.53Å1.56Å
C33C34sing1.53Å1.58Å
C18O19doub1.21Å1.27Å
O07C06doub1.22Å1.22Å
C37C36doub1.38Å1.49ÅAromatic
C37C38sing1.38Å1.36ÅAromatic
C36C35sing1.38Å1.40ÅAromatic
N08C06sing1.35Å1.43Å
C38C39doub1.38Å1.40ÅAromatic
C06N05sing1.35Å1.35Å
C35C34sing1.51Å1.54Å
C35C40doub1.38Å1.42ÅAromatic
C39C40sing1.38Å1.45ÅAromatic
N05C04sing1.47Å1.45Å
N05C41sing1.47Å1.39Å
C04C03sing1.53Å1.47Å
C41C42sing1.53Å1.50Å
C03N02sing1.47Å1.45Å
C42N02sing1.47Å1.47Å
N02C01sing1.47Å1.49Å
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C11H3sing1.09Å1.10Å
C11H4sing1.09Å1.10Å
C12H5sing1.09Å1.10Å
C12H6sing1.09Å1.10Å
C01H7sing1.09Å1.10Å
C01H8sing1.09Å1.10Å
C01H9sing1.09Å1.10Å
C03H11sing1.09Å1.10Å
C03H12sing1.09Å1.10Å
C04H13sing1.09Å1.10Å
C04H14sing1.09Å1.10Å
N08H15sing0.97Å1.00Å
C09H16sing1.09Å1.10Å
N14H17sing0.97Å1.00Å
N16H18sing0.97Å1.00Å
N16H19sing0.97Å1.00Å
N17H20sing0.97Å1.00Å
N20H21sing0.97Å1.00Å
C21H22sing1.09Å1.10Å
C22H23sing1.08Å1.08Å
C23H25sing1.08Å1.08Å
C28H27sing1.08Å1.08Å
C29H28sing1.08Å1.08Å
C30H29sing1.08Å1.08Å
C31H30sing1.08Å1.08Å
C32H31sing1.08Å1.08Å
C33H32sing1.09Å1.10Å
C33H33sing1.09Å1.10Å
C34H34sing1.09Å1.10Å
C34H35sing1.09Å1.10Å
C36H36sing1.08Å1.08Å
C37H37sing1.08Å1.08Å
C38H38sing1.08Å1.08Å
C39H39sing1.08Å1.08Å
C40H40sing1.08Å1.08Å
C41H41sing1.09Å1.10Å
C41H42sing1.09Å1.10Å
C42H43sing1.09Å1.10Å
C42H44sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C31C30C29123.1°119.9°
C30C31C32116.8°120.0°
C31C30H29118.4°120.0°
C30C31H30121.6°120.0°
C30C29C28117.7°120.0°
C30C29H28121.2°120.0°
C29C30H29118.5°120.0°
C31C32C27121.4°120.0°
C32C31H30121.6°120.0°
C31C32H31119.3°120.0°
C29C28C27118.6°120.0°
C29C28H27120.7°120.0°
C28C29H28121.2°120.0°
C32C27C28122.3°120.0°
C32C27S24122.0°120.0°
C27C32H31119.3°120.0°
C28C27S24115.7°120.0°
C27C28H27120.7°119.9°
C27S24O25111.2°106.4°
C27S24C23103.4°107.2°
C27S24O26108.6°106.4°
O25S24C23108.5°106.4°
O25S24O26115.7°123.1°
C23S24O26108.7°106.4°
S24C23C22110.8°120.0°
S24C23H25124.6°120.0°
C23C22C21115.1°120.0°
C23C22H23122.4°120.0°
C22C23H25124.6°120.0°
N14O13C12113.4°114.0°
O13N14C15119.0°120.0°
O13N14H17120.6°120.0°
O13C12C11106.3°109.5°
O13C12H5110.2°109.5°
O13C12H6110.3°109.5°
N17C15N14113.5°120.0°
N17C15N16124.2°120.0°
C15N17H20112.0°120.0°
C12C11C10112.1°109.5°
C12C11H3108.8°109.5°
C12C11H4108.8°109.5°
C11C12H5110.3°109.5°
C11C12H6110.2°109.5°
C11C10C09113.5°109.5°
C11C10H1108.5°109.5°
C11C10H2108.4°109.4°
C10C11H3108.8°109.5°
C10C11H4108.8°109.4°
N14C15N16122.2°120.0°
C15N14H17120.5°119.9°
C15N16H18120.0°120.0°
C15N16H19120.0°120.0°
C10C09C18109.0°109.5°
C10C09N08113.6°109.4°
C09C10H1108.4°109.5°
C09C10H2108.5°109.5°
C10C09H16107.2°109.5°
C22C21N20111.4°109.5°
C22C21C33110.6°109.5°
C22C21H22108.0°109.5°
C21C22H23122.5°120.0°
C21N20C18122.9°120.0°
N20C21C33110.4°109.5°
C21N20H21118.5°120.0°
N20C21H22108.9°109.5°
N20C18C09119.5°120.0°
N20C18O19120.4°120.0°
C18N20H21118.6°120.0°
C18C09N08110.6°109.4°
C09C18O19120.1°120.0°
C18C09H16107.6°109.5°
C09N08C06113.0°120.0°
C09N08H15123.5°120.0°
N08C09H16108.7°109.5°
C21C33C34107.9°109.5°
C33C21H22107.4°109.5°
C21C33H32109.9°109.5°
C21C33H33109.8°109.5°
C33C34C35113.0°109.5°
C34C33H32109.9°109.4°
C34C33H33109.8°109.5°
C33C34H34108.6°109.5°
C33C34H35108.6°109.5°
O07C06N08122.3°120.0°
O07C06N05121.2°120.0°
C36C37C38120.2°120.0°
C37C36C35114.7°120.0°
C37C36H36122.7°120.0°
C36C37H37119.9°120.0°
C37C38C39126.4°120.0°
C38C37H37119.9°120.0°
C37C38H38116.8°120.0°
C36C35C34117.5°120.0°
C36C35C40123.1°120.0°
C35C36H36122.7°120.0°
N08C06N05116.3°120.0°
C06N08H15123.5°120.0°
C38C39C40113.9°120.0°
C39C38H38116.8°120.0°
C38C39H39123.0°120.0°
C06N05C04119.5°120.9°
C06N05C41120.4°120.9°
C34C35C40119.4°120.0°
C35C34H34108.6°109.4°
C35C34H35108.6°109.5°
C35C40C39121.5°120.0°
C35C40H40119.2°120.0°
C40C39H39123.1°120.0°
C39C40H40119.3°120.0°
C04N05C41118.7°118.2°
N05C04C03117.1°108.5°
N05C04H13107.5°109.6°
N05C04H14107.5°109.9°
N05C41C42106.6°108.5°
N05C41H41110.2°109.6°
N05C41H42110.2°109.7°
C04C03N02112.0°109.3°
C04C03H11108.8°109.5°
C04C03H12108.8°109.5°
C03C04H13107.5°109.6°
C03C04H14107.5°109.7°
C41C42N02115.4°109.3°
C42C41H41110.2°109.6°
C42C41H42110.2°109.6°
C41C42H43108.0°109.5°
C41C42H44108.0°109.5°
C03N02C42115.8°111.3°
C03N02C01121.8°111.0°
N02C03H11108.8°109.5°
N02C03H12108.8°109.4°
C42N02C01118.2°110.9°
N02C42H43108.0°109.5°
N02C42H44108.0°109.5°
N02C01H7109.5°109.5°
N02C01H8109.5°109.5°
N02C01H9109.5°109.5°
H1C10H2109.5°109.5°
H3C11H4109.5°109.4°
H5C12H6109.5°109.5°
H7C01H8109.5°109.5°
H7C01H9109.4°109.5°
H8C01H9109.5°109.4°
H11C03H12109.5°109.5°
H13C04H14109.5°109.6°
H18N16H19120.0°120.0°
H32C33H33109.5°109.5°
H34C34H35109.4°109.4°
H41C41H42109.5°109.8°
H43C42H44109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C31C30C29H29180.0°179.7°
C30C31C32H30180.0°179.8°
C31C30C29C281.6°0.0°
C30C31C32C274.0°0.6°
C31C30C29H28178.3°180.0°
C30C31C32H31176.0°180.0°
C29C30C31C322.0°0.3°
C30C29C28H28180.0°180.0°
C30C29C28C273.4°0.0°
C30C29C28H27176.6°180.0°
C29C30C31H30178.0°180.0°
C31C32C27H31180.0°179.4°
C31C32C27C282.2°0.6°
C31C32C27S24179.9°179.7°
C32C31C30H29178.0°180.0°
C29C28C27C321.6°0.3°
C29C28C27H27180.0°179.9°
C29C28C27S24176.2°180.0°
C28C29C30H29178.4°179.7°
C32C27C28S24177.8°179.7°
C32C27S24O2577.2°156.2°
C32C27S24C2339.0°90.3°
C32C27S24O26154.3°23.2°
C32C27C28H27178.4°179.7°
C27C32C31H30176.0°179.7°
C28C27S24O25100.6°23.5°
C28C27S24C23143.2°90.0°
C28C27S24O2627.9°156.4°
C27C28C29H28176.6°180.0°
C28C27C32H31177.8°180.0°
C27S24O25C23113.1°114.1°
C27S24O25O26124.5°123.0°
C27S24C23O26115.2°113.5°
C27S24C23C22162.8°115.0°
C27S24C23H2517.2°65.1°
S24C27C28H273.8°0.0°
S24C27C32H310.1°0.3°
O25S24C23O26126.6°132.9°
O25S24C23C2279.0°131.4°
O25S24C23H25101.0°48.5°
S24C23C22H25180.0°179.9°
S24C23C22C21118.1°180.0°
S24C23C22H2361.8°0.0°
O26S24C23C2247.6°1.5°
O26S24C23H25132.4°178.6°
C23C22C21H23180.0°180.0°
C23C22C21N2061.9°120.0°
C23C22C21C3361.2°120.0°
C23C22C21H22178.5°0.0°
O13N14C15N172.2°0.1°
N14O13C12C11172.3°180.0°
O13N14C15H17180.0°179.9°
O13N14C15N16175.4°180.0°
N14O13C12H552.8°60.0°
N14O13C12H668.2°60.0°
O13C12C11H5119.5°120.0°
O13C12C11H6119.5°120.0°
O13C12C11C10177.9°180.0°
C12O13N14C15105.0°180.0°
O13C12C11H357.5°60.0°
O13C12C11H461.7°60.0°
O13C12H5H6121.5°120.0°
C12O13N14H1775.0°0.1°
N17C15N14N16177.6°179.9°
N17C15N14H17177.8°180.0°
N17C15N16H18177.3°180.0°
N17C15N16H192.7°0.0°
C12C11C10H3120.4°120.1°
C12C11C10H4120.4°120.0°
C12C11C10C0987.8°180.0°
C12C11C10H1151.6°60.0°
C12C11C10H232.8°60.0°
C12C11H3H4118.8°120.0°
C11C12H5H6121.4°120.0°
C11C10C09H1120.6°120.0°
C11C10C09H2120.6°120.0°
C11C10C09C18165.6°175.0°
C11C10C09N0870.6°65.0°
C11C10H1H2118.1°120.0°
C10C11H3H4118.8°119.9°
C10C11C12H562.6°60.0°
C10C11C12H658.4°60.0°
C11C10C09H1649.4°55.0°
N14C15N16H180.0°0.0°
N14C15N16H19180.0°180.0°
N14C15N17H20177.6°180.0°
N16C15N14H174.6°0.1°
C15N16H18H19180.0°180.0°
N16C15N17H200.0°0.1°
C10C09C18N2099.5°80.0°
C10C09C18N08125.5°120.0°
C10C09C18H16115.9°120.1°
C10C09N08H16119.2°120.0°
C10C09C18O1979.5°99.9°
C10C09N08C06174.0°60.0°
C09C10H1H2118.2°120.0°
C09C10C11H332.6°59.9°
C09C10C11H4151.8°60.0°
C10C09N08H156.0°120.1°
C22C21N20C33123.3°120.0°
C22C21N20H22119.0°120.0°
C22C21N20C18114.9°155.0°
C22C21C33H22117.6°120.0°
C22C21C33C34166.1°175.0°
C22C21N20H2165.1°25.0°
C21C22C23H2561.9°0.1°
C22C21C33H3274.1°65.0°
C22C21C33H3346.3°55.0°
C21N20C18H21180.0°180.0°
C21N20C18C09179.5°180.0°
N20C21C33H22118.6°120.0°
N20C21C33C3470.2°65.0°
C21N20C18O190.6°0.0°
N20C21C22H23118.1°60.0°
N20C21C33H3249.6°55.0°
N20C21C33H33170.1°175.0°
N20C18C09O19179.0°179.9°
N20C18C09N08135.0°160.0°
C18N20C21C33121.8°85.0°
N20C18C09H1616.4°40.0°
C18N20C21H224.1°35.0°
C18C09N08H16117.9°120.0°
C18C09N08C0663.1°60.0°
C18C09C10H145.0°55.0°
C18C09C10H273.9°65.0°
C18C09N08H15116.9°120.0°
C09C18N20H210.4°0.0°
N08C09C18O1946.1°20.0°
C09N08C06O073.0°5.3°
C09N08C06H15180.0°179.9°
C09N08C06N05171.1°174.7°
N08C09C10H1168.8°175.0°
N08C09C10H250.0°55.0°
C21C33C34H32119.8°120.0°
C21C33C34H33119.7°120.0°
C21C33C34C35177.6°180.0°
C33C21N20H2158.2°95.0°
C33C21C22H23118.7°60.0°
C21C33H32H33120.7°120.0°
C21C33C34H3461.9°60.0°
C21C33C34H3557.1°60.0°
C33C34C35C36113.6°89.7°
C33C34C35H34120.5°120.0°
C33C34C35H35120.5°120.0°
C33C34C35C4068.5°90.0°
C34C33C21H2248.5°55.0°
C34C33H32H33120.7°120.0°
C33C34H34H35118.4°120.0°
O19C18C09H16164.6°140.0°
O19C18N20H21179.4°180.0°
O07C06N08N05174.0°179.9°
O07C06N05C045.7°174.9°
O07C06N05C41172.2°5.0°
O07C06N08H15177.0°174.7°
C36C37C38H37180.0°180.0°
C37C36C35H36180.0°179.9°
C36C37C38C394.8°0.0°
C37C36C35C34179.0°180.0°
C37C36C35C403.1°0.3°
C36C37C38H38175.2°180.0°
C38C37C36C350.7°0.0°
C37C38C39H38180.0°180.0°
C37C38C39C404.5°0.2°
C38C37C36H36179.3°180.0°
C37C38C39H39175.5°180.0°
C36C35C34C40177.9°179.7°
C36C35C40C393.3°0.5°
C36C35C34H34125.9°150.2°
C36C35C34H357.0°30.3°
C35C36C37H37179.3°180.0°
C36C35C40H40176.7°179.7°
N08C06N05C04179.8°5.0°
N08C06N05C4113.7°175.1°
C06N08C09H1654.8°180.0°
C38C39C40C350.4°0.5°
C38C39C40H39180.0°179.8°
C39C38C37H37175.2°180.0°
C38C39C40H40179.6°179.8°
C06N05C04C41166.7°179.9°
C06N05C04C03165.3°128.8°
C06N05C41C42147.9°128.8°
C06N05C04H1344.2°9.1°
C06N05C04H1473.6°111.3°
N05C06N08H159.0°5.2°
C06N05C41H4128.3°9.1°
C06N05C41H4292.6°111.4°
C34C35C40C39178.9°179.7°
C35C34C33H3257.8°60.0°
C35C34C33H3362.7°60.0°
C35C34H34H35118.4°120.0°
C34C35C36H361.0°0.0°
C34C35C40H401.1°0.0°
C35C40C39H40180.0°179.7°
C40C35C34H3452.1°30.0°
C40C35C34H35171.0°150.0°
C40C35C36H36176.9°179.8°
C35C40C39H39179.5°179.7°
C40C39C38H38175.5°179.8°
N05C04C03H13121.1°119.7°
N05C04C03H14121.1°120.0°
C04N05C41C4245.5°51.2°
N05C04C03N0240.7°53.9°
N05C04C03H1179.7°66.1°
N05C04C03H12161.1°173.8°
N05C04H13H14116.5°120.6°
C04N05C41H41165.0°170.9°
C04N05C41H4274.1°68.5°
C41N05C04C031.4°51.2°
N05C41C42H41119.5°119.7°
N05C41C42H42119.5°119.7°
N05C41C42N0256.8°53.9°
C41N05C04H13122.5°170.9°
C41N05C04H14119.7°68.6°
N05C41H41H42121.3°120.5°
N05C41C42H4364.1°173.8°
N05C41C42H44177.6°66.1°
C04C03N02H11120.4°120.0°
C04C03N02H12120.4°119.9°
C04C03N02C4228.4°63.2°
C04C03N02C01128.4°172.8°
C04C03H11H12118.9°120.1°
C03C04H13H14116.5°120.4°
C41C42N02C0319.5°63.1°
C41C42N02H43120.9°119.9°
C41C42N02H44120.9°120.0°
C41C42N02C01177.3°172.7°
C42C41H41H42121.4°120.5°
C41C42H43H44117.3°120.1°
C03N02C42C01157.7°124.1°
C03N02C01H7180.0°59.9°
C03N02C01H860.0°180.0°
C03N02C01H960.0°60.1°
N02C03H11H12118.8°120.0°
N02C03C04H13161.8°173.6°
N02C03C04H1480.4°66.1°
C03N02C42H43101.3°176.9°
C03N02C42H44140.4°56.8°
C42N02C01H723.7°64.3°
C42N02C01H8143.7°55.7°
C42N02C01H996.3°175.7°
C42N02C03H1192.0°56.8°
C42N02C03H12148.8°176.9°
N02C42C41H41176.3°173.5°
N02C42C41H4262.7°65.9°
N02C42H43H44117.3°120.1°
N02C01H7H8120.0°120.1°
N02C01H7H9120.0°120.0°
N02C01H8H9120.0°120.0°
C01N02C03H11111.2°67.2°
C01N02C03H128.1°52.8°
C01N02C42H4356.4°52.8°
C01N02C42H4461.9°67.3°
H1C10C11H388.0°60.1°
H1C10C11H431.2°180.0°
H1C10C09H1671.2°65.0°
H2C10C11H3153.2°180.0°
H2C10C11H487.6°60.1°
H2C10C09H16170.0°175.0°
H3C11C12H5177.0°180.0°
H3C11C12H662.0°60.0°
H4C11C12H557.8°60.0°
H4C11C12H6178.8°180.0°
H7C01H8H9120.0°120.0°
H11C03C04H1341.4°53.6°
H11C03C04H14159.2°173.9°
H12C03C04H1377.8°66.5°
H12C03C04H1440.0°53.8°
H15N08C09H16125.2°0.1°
H21N20C21H22175.9°145.0°
H22C21C22H231.5°180.0°
H22C21C33H32168.2°175.0°
H22C21C33H3371.3°65.0°
H23C22C23H25118.2°179.9°
H27C28C29H283.4°0.0°
H28C29C30H291.6°0.3°
H29C30C31H302.0°0.2°
H30C31C32H314.0°0.2°
H32C33C34H34178.3°180.0°
H32C33C34H3562.7°60.0°
H33C33C34H3457.9°60.0°
H33C33C34H35176.8°180.0°
H36C36C37H370.7°0.0°
H37C37C38H384.8°0.0°
H38C38C39H394.6°0.0°
H39C39C40H400.5°0.0°
H41C41C42H4355.5°66.5°
H41C41C42H4462.8°53.6°
H42C41C42H43176.4°54.1°
H42C41C42H4458.1°174.2°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon