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2UJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OABCBBdoub1.21Å1.23Å
CANCBBsing1.51Å1.51Å
CANCAAsing1.53Å1.53Å
CBBNAUsing1.35Å1.31Å
NAUCAPsing1.46Å1.47Å
CAPCAOsing1.53Å1.53Å
CAOCAQsing1.53Å1.55Å
CAQN2sing1.46Å1.46Å
N2C2sing1.37Å1.36Å
O3'C3'sing1.43Å1.43Å
C2N3sing1.36Å1.36Å
C2N1doub1.32Å1.36Å
N3C4sing1.37Å1.38Å
O2'C2'sing1.43Å1.41Å
C3'C2'sing1.55Å1.51Å
C3'C4'sing1.54Å1.52Å
N1C6sing1.34Å1.32Å
C1'C2'sing1.55Å1.53Å
C1'O4'sing1.44Å1.41Å
C1'N9sing1.46Å1.45Å
C4'O4'sing1.44Å1.44Å
C4'C5'sing1.53Å1.54Å
C4N9sing1.36Å1.32ÅAromatic
C4C5doub1.39Å1.39ÅAromatic
N9C8sing1.36Å1.34ÅAromatic
C6C5sing1.47Å1.47Å
C6O6doub1.22Å1.33Å
C5N7sing1.35Å1.35ÅAromatic
C5'O5'sing1.43Å1.47Å
C8N7doub1.30Å1.34ÅAromatic
O5'PAsing1.61Å1.59Å
O2APAdoub1.48Å1.48Å
PAO3Asing1.61Å1.62Å
PAO1Asing1.61Å1.57Å
O3APBsing1.61Å1.62Å
O1GPGdoub1.48Å1.50Å
O3BPBsing1.61Å1.61Å
O3BPGsing1.61Å1.68Å
PBO1Bdoub1.48Å1.51Å
PBO2Bsing1.61Å1.56Å
PGO2Gsing1.61Å1.50Å
PGO3Gsing1.61Å1.47Å
CANH1sing1.09Å1.10Å
CANH2sing1.09Å1.10Å
CAAH3sing1.09Å1.10Å
CAAH4sing1.09Å1.10Å
CAAH5sing1.09Å1.10Å
NAUH6sing0.97Å1.00Å
CAPH7sing1.09Å1.10Å
CAPH8sing1.09Å1.10Å
CAOH9sing1.09Å1.10Å
CAOH10sing1.09Å1.10Å
CAQH11sing1.09Å1.10Å
CAQH12sing1.09Å1.10Å
N2H13sing0.97Å1.00Å
N3H14sing0.97Å1.00Å
C8H15sing1.08Å1.08Å
C1'H16sing1.09Å1.10Å
C2'H17sing1.09Å1.10Å
O2'H18sing0.97Å0.95Å
C3'H19sing1.09Å1.10Å
O3'H20sing0.97Å0.95Å
C4'H21sing1.09Å1.10Å
C5'H22sing1.09Å1.10Å
C5'H23sing1.09Å1.10Å
O1AH24sing0.97Å0.95Å
O2BH25sing0.97Å0.95Å
O2GH26sing0.97Å0.95Å
O3GH27sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OABCBBCAN122.7°120.0°
OABCBBNAU120.8°120.0°
CBBCANCAA111.7°109.5°
CANCBBNAU116.4°120.0°
CBBCANH1108.9°109.5°
CBBCANH2108.9°109.5°
CAACANH1108.9°109.5°
CAACANH2108.9°109.5°
CANCAAH3109.5°109.5°
CANCAAH4109.5°109.5°
CANCAAH5109.5°109.5°
CBBNAUCAP124.0°120.0°
CBBNAUH6118.0°120.0°
NAUCAPCAO111.5°109.5°
CAPNAUH6118.0°120.0°
NAUCAPH7109.0°109.5°
NAUCAPH8109.0°109.5°
CAPCAOCAQ111.9°109.5°
CAOCAPH7109.0°109.4°
CAOCAPH8109.0°109.5°
CAPCAOH9108.9°109.4°
CAPCAOH10108.8°109.5°
CAOCAQN2110.0°109.4°
CAQCAOH9108.8°109.5°
CAQCAOH10108.9°109.5°
CAOCAQH11109.3°109.5°
CAOCAQH12109.3°109.5°
CAQN2C2120.6°120.0°
N2CAQH11109.3°109.5°
N2CAQH12109.3°109.4°
CAQN2H13119.7°120.0°
N2C2N3118.3°118.8°
N2C2N1120.0°118.7°
C2N2H13119.7°119.9°
O3'C3'C2'107.5°110.5°
O3'C3'C4'109.1°110.5°
O3'C3'H19112.7°110.5°
C3'O3'H20109.5°114.0°
N3C2N1121.6°122.5°
C2N3C4118.7°120.6°
C2N3H14120.7°119.7°
C2N1C6121.9°121.3°
N3C4N9132.2°134.7°
N3C4C5121.7°118.9°
C4N3H14120.7°119.7°
O2'C2'C3'114.9°110.9°
O2'C2'C1'109.9°110.9°
O2'C2'H17111.3°110.9°
C2'O2'H18109.5°113.9°
C2'C3'C4'104.6°104.2°
C3'C2'C1'100.9°102.1°
C3'C2'H17109.8°110.9°
C2'C3'H19111.4°110.5°
C3'C4'O4'105.7°107.3°
C3'C4'C5'116.2°109.9°
C4'C3'H19111.2°110.5°
C3'C4'H21108.9°109.9°
N1C6C5119.4°118.6°
N1C6O6121.5°120.7°
C2'C1'O4'107.4°103.5°
C2'C1'N9110.2°110.6°
C2'C1'H16108.5°110.6°
C1'C2'H17109.5°110.9°
O4'C1'N9111.0°110.6°
C1'O4'C4'110.4°107.0°
O4'C1'H16110.2°110.6°
C1'N9C4121.2°126.2°
C1'N9C8129.5°126.2°
N9C1'H16109.5°110.7°
O4'C4'C5'107.2°109.9°
O4'C4'H21110.0°109.9°
C4'C5'O5'106.7°109.5°
C5'C4'H21108.7°110.0°
C4'C5'H22110.2°109.5°
C4'C5'H23110.2°109.4°
N9C4C5106.1°106.4°
C4N9C8109.2°107.5°
C4C5C6116.3°118.1°
C4C5N7108.7°107.4°
N9C8N7109.6°109.5°
N9C8H15125.2°125.3°
C5C6O6118.6°120.7°
C6C5N7134.8°134.5°
C5N7C8106.3°109.1°
C5'O5'PA117.9°123.0°
O5'C5'H22110.1°109.5°
O5'C5'H23110.1°109.4°
N7C8H15125.2°125.2°
O5'PAO2A110.8°109.5°
O5'PAO3A106.4°109.5°
O5'PAO1A107.6°109.4°
O2APAO3A112.7°109.5°
O2APAO1A115.2°109.4°
O3APAO1A103.6°109.5°
PAO3APB129.6°134.0°
PAO1AH24109.5°114.0°
O3APBO3B106.5°109.5°
O3APBO1B103.1°109.5°
O3APBO2B104.0°109.5°
O1GPGO3B102.2°109.5°
O1GPGO2G112.6°109.5°
O1GPGO3G115.1°109.5°
PBO3BPG129.6°134.0°
O3BPBO1B109.2°109.5°
O3BPBO2B111.8°109.5°
O3BPGO2G110.7°109.4°
O3BPGO3G101.6°109.5°
O1BPBO2B120.8°109.5°
PBO2BH25109.5°114.0°
O2GPGO3G113.4°109.5°
PGO2GH26109.5°114.0°
PGO3GH27109.5°114.0°
H1CANH2109.5°109.4°
H3CAAH4109.5°109.5°
H3CAAH5109.5°109.4°
H4CAAH5109.4°109.4°
H7CAPH8109.5°109.5°
H9CAOH10109.5°109.5°
H11CAQH12109.5°109.5°
H22C5'H23109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OABCBBCANNAU179.1°179.7°
OABCBBCANCAA66.0°0.1°
OABCBBNAUCAP1.4°0.1°
OABCBBCANH1173.6°120.0°
OABCBBCANH254.3°120.1°
OABCBBNAUH6178.6°180.0°
CBBCANCAAH1120.3°120.1°
CBBCANCAAH2120.3°120.0°
CANCBBNAUCAP177.7°179.7°
CBBCANH1H2119.0°119.9°
CBBCANCAAH3180.0°180.0°
CBBCANCAAH460.0°59.9°
CBBCANCAAH560.0°60.0°
CANCBBNAUH62.4°0.3°
CAACANCBBNAU114.9°179.7°
CAACANH1H2119.0°120.0°
CANCAAH3H4120.0°120.0°
CANCAAH3H5120.0°120.0°
CANCAAH4H5120.0°120.0°
CBBNAUCAPH6180.0°180.0°
CBBNAUCAPCAO74.9°180.0°
NAUCBBCANH15.4°59.7°
NAUCBBCANH2124.8°60.3°
CBBNAUCAPH745.4°60.1°
CBBNAUCAPH8164.8°60.0°
NAUCAPCAOH7120.3°120.0°
NAUCAPCAOH8120.3°120.1°
NAUCAPCAOCAQ67.7°180.0°
NAUCAPH7H8119.1°120.1°
NAUCAPCAOH952.6°60.1°
NAUCAPCAOH10171.9°60.0°
CAPCAOCAQH9120.4°119.9°
CAPCAOCAQH10120.4°120.0°
CAPCAOCAQN2178.9°180.0°
CAOCAPNAUH6105.1°0.0°
CAOCAPH7H8119.1°119.9°
CAPCAOH9H10118.9°120.0°
CAPCAOCAQH1158.8°60.0°
CAPCAOCAQH1261.1°60.0°
CAOCAQN2H11120.1°120.0°
CAOCAQN2H12120.1°120.0°
CAOCAQN2C2158.5°180.0°
CAQCAOCAPH7172.0°60.0°
CAQCAOCAPH852.6°59.9°
CAQCAOH9H10118.9°120.1°
CAOCAQH11H12119.8°120.0°
CAOCAQN2H1321.5°0.0°
CAQN2C2H13180.0°180.0°
CAQN2C2N38.2°180.0°
CAQN2C2N1169.5°0.2°
N2CAQCAOH960.7°60.0°
N2CAQCAOH1058.5°60.0°
N2CAQH11H12119.7°120.0°
N2C2N3N1177.7°179.7°
N2C2N3C4179.0°180.0°
N2C2N1C6174.0°180.0°
C2N2CAQH1181.4°60.0°
C2N2CAQH1238.4°60.0°
N2C2N3H141.0°0.0°
O3'C3'C2'O2'34.3°20.4°
O3'C3'C2'C4'115.9°118.6°
O3'C3'C2'H19123.9°122.7°
O3'C3'C4'H19124.9°122.6°
O3'C3'C2'C1'83.9°97.7°
O3'C3'C4'O4'90.9°120.7°
O3'C3'C4'C5'150.4°119.8°
O3'C3'C2'H17160.6°144.1°
O3'C3'C4'H2127.3°1.3°
C2N3C4H14180.0°180.0°
N3C2N1C63.6°0.2°
C2N3C4N9178.8°180.0°
C2N3C4C52.5°0.0°
N3C2N2H13171.8°0.0°
N1C2N3C41.3°0.3°
C2N1C6C57.1°0.0°
C2N1C6O6178.5°180.0°
N1C2N2H1310.5°179.8°
N1C2N3H14178.7°179.8°
N3C4N9C1'1.4°0.1°
N3C4N9C5178.8°180.0°
N3C4N9C8177.7°179.7°
N3C4C5C60.8°0.3°
N3C4C5N7176.2°179.9°
O2'C2'C3'C1'118.2°118.2°
O2'C2'C3'H17126.3°123.6°
O2'C2'C3'C4'150.1°139.1°
O2'C2'C1'H17122.6°123.6°
O2'C2'C1'O4'151.8°155.2°
O2'C2'C1'N987.1°86.3°
O2'C2'C1'H1632.7°36.7°
O2'C2'C3'H1989.6°102.2°
C2'C3'C4'H19120.3°118.7°
C3'C2'C1'H17115.7°118.2°
C3'C2'C1'O4'30.1°37.0°
C3'C2'C1'N9151.1°155.5°
C2'C3'C4'O4'23.9°2.0°
C2'C3'C4'C5'94.8°121.5°
C3'C2'C1'H1689.0°81.5°
C3'C2'O2'H18180.0°67.3°
C2'C3'O3'H20180.0°61.5°
C2'C3'C4'H21142.0°117.4°
C4'C3'C2'C1'32.0°20.9°
C3'C4'O4'C1'4.7°26.5°
C3'C4'O4'C5'124.6°119.5°
C3'C4'O4'H21117.4°119.4°
C3'C4'C5'H21123.2°121.1°
C3'C4'C5'O5'42.6°175.0°
C4'C3'C2'H1783.5°97.3°
C4'C3'O3'H2067.1°176.2°
C3'C4'C5'H22162.2°54.9°
C3'C4'C5'H2377.0°65.0°
N1C6C5C45.6°0.3°
N1C6C5O6171.7°180.0°
N1C6C5N7179.4°180.0°
C2'C1'O4'N9120.6°118.5°
C2'C1'O4'H16118.0°118.5°
C2'C1'N9H16119.3°123.0°
C2'C1'O4'C4'16.3°40.1°
C2'C1'N9C4128.6°85.0°
C2'C1'N9C846.9°95.4°
C1'C2'O2'H1867.0°180.0°
C1'C2'C3'H19152.2°139.6°
O4'C1'N9H16121.8°123.0°
C1'O4'C4'C5'119.8°146.0°
O4'C1'N9C4112.5°160.9°
O4'C1'N9C872.0°18.6°
O4'C1'C2'H1785.6°81.2°
C1'O4'C4'H21122.1°92.9°
N9C1'O4'C4'136.9°158.5°
C1'N9C4C8176.3°179.6°
C1'N9C4C5177.4°179.9°
C1'N9C8N7175.0°179.9°
C1'N9C8H155.0°0.4°
N9C1'C2'H1735.4°37.3°
O4'C4'C5'H21118.9°121.1°
O4'C4'C5'O5'75.3°67.1°
C4'O4'C1'H16101.7°78.4°
O4'C4'C3'H19144.2°116.7°
O4'C4'C5'H2244.3°172.8°
O4'C4'C5'H23165.1°52.8°
C4'C5'O5'H22119.6°120.0°
C4'C5'O5'H23119.6°119.9°
C4'C5'O5'PA156.2°180.0°
C5'C4'C3'H1925.5°2.8°
C4'C5'H22H23121.3°120.0°
N9C4C5C6178.1°179.7°
N9C4C5N72.8°0.1°
C4N9C8N70.9°0.5°
N9C4N3H141.1°0.0°
C4N9C8H15179.1°180.0°
C4N9C1'H169.3°37.9°
C5C4N9C81.1°0.3°
C4C5C6N7173.8°179.7°
C4C5C6O6177.3°179.7°
C4C5N7C83.3°0.2°
C5C4N3H14177.5°180.0°
N9C8N7C52.6°0.4°
N9C8N7H15180.0°179.6°
C8N9C1'H16166.2°141.6°
C6C5N7C8177.5°180.0°
O6C6C5N78.9°0.0°
C5N7C8H15177.4°180.0°
C5'O5'PAO2A69.2°54.9°
C5'O5'PAO3A53.6°174.9°
C5'O5'PAO1A164.1°65.0°
O5'C5'C4'H21165.8°54.0°
O5'C5'H22H23121.2°120.0°
O5'PAO2AO3A119.1°120.0°
O5'PAO2AO1A122.4°119.9°
O5'PAO3AO1A113.3°120.0°
O5'PAO3APB172.9°165.0°
PAO5'C5'H2284.2°59.9°
PAO5'C5'H2336.6°60.1°
O5'PAO1AH24124.1°60.1°
O2APAO3AO1A125.1°120.0°
O2APAO3APB51.3°45.0°
O2APAO1AH240.0°180.0°
PAO3APBO3B96.3°165.0°
PAO3APBO1B148.8°45.0°
PAO3APBO2B22.0°75.0°
O3APAO1AH24123.5°59.9°
O1APAO3APB73.8°75.0°
O3APBO3BO1B110.7°120.0°
O3APBO3BO2B113.0°120.0°
O3APBO3BPG153.3°160.0°
O3APBO1BO2B115.3°120.0°
O3APBO2BH25114.9°60.0°
O1GPGO3BPB171.7°45.0°
O1GPGO3BO2G120.1°120.0°
O1GPGO3BO3G119.2°120.0°
O1GPGO2GO3G132.9°120.0°
O1GPGO2GH260.0°60.0°
O1GPGO3GH270.0°180.0°
O3BPBO1BO2B131.7°120.0°
PBO3BPGO2G51.6°165.0°
PBO3BPGO3G69.2°75.0°
O3BPBO2BH25130.5°60.0°
PGO3BPBO1B96.0°40.0°
PGO3BPBO2B40.2°80.0°
O3BPGO2GO3G113.4°120.0°
O3BPGO2GH26113.7°180.0°
O3BPGO3GH27109.5°60.0°
O1BPBO2BH250.0°180.0°
O2GPGO3GH27131.7°60.0°
O3GPGO2GH26132.9°60.0°
H1CANCAAH359.7°59.9°
H1CANCAAH4179.7°180.0°
H1CANCAAH560.4°60.0°
H2CANCAAH359.7°60.0°
H2CANCAAH460.4°60.1°
H2CANCAAH5179.7°180.0°
H3CAAH4H5120.0°120.0°
H6NAUCAPH7134.6°119.9°
H6NAUCAPH815.3°120.0°
H7CAPCAOH967.7°180.0°
H7CAPCAOH1051.6°60.0°
H8CAPCAOH9172.9°60.0°
H8CAPCAOH1067.8°179.9°
H9CAOCAQH11179.2°180.0°
H9CAOCAQH1259.3°59.9°
H10CAOCAQH1161.5°60.0°
H10CAOCAQH12178.6°180.0°
H11CAQN2H1398.5°120.0°
H12CAQN2H13141.6°120.0°
H16C1'C2'H17155.3°160.4°
H17C2'O2'H1854.5°56.4°
H17C2'C3'H1936.7°21.4°
H19C3'O3'H2056.9°61.2°
H19C3'C4'H2197.6°123.9°
H21C4'C5'H2274.6°66.1°
H21C4'C5'H2346.3°173.9°

226707

PDB entries from 2024-10-30

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