2TU
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.35Å | 1.40Å | |
| N1 | C6 | sing | 1.37Å | 1.33Å | |
| N1 | C1' | sing | 1.47Å | 1.47Å | |
| C2 | S2 | doub | 1.71Å | 1.74Å | |
| C2 | N3 | sing | 1.35Å | 1.35Å | |
| N3 | C4 | sing | 1.35Å | 1.36Å | |
| C4 | O4 | doub | 1.22Å | 1.25Å | |
| C4 | C5 | sing | 1.42Å | 1.40Å | |
| C5 | C6 | doub | 1.35Å | 1.39Å | |
| C1' | C2' | sing | 1.55Å | 1.52Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C3' | sing | 1.55Å | 1.53Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C4' | sing | 1.54Å | 1.53Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C5' | sing | 1.53Å | 1.52Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| N3 | HN3 | sing | 0.97Å | 1.00Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 121.4° | 120.6° |
| C2 | N1 | C1' | 117.0° | 119.7° |
| N1 | C2 | S2 | 118.7° | 119.5° |
| N1 | C2 | N3 | 119.6° | 120.9° |
| C6 | N1 | C1' | 121.6° | 119.7° |
| N1 | C6 | C5 | 119.0° | 119.7° |
| N1 | C6 | H6 | 120.5° | 120.1° |
| N1 | C1' | C2' | 114.2° | 110.6° |
| N1 | C1' | O4' | 108.5° | 110.6° |
| N1 | C1' | H1' | 105.9° | 110.5° |
| S2 | C2 | N3 | 121.7° | 119.6° |
| C2 | N3 | C4 | 120.4° | 120.3° |
| C2 | N3 | HN3 | 119.8° | 119.9° |
| N3 | C4 | O4 | 120.0° | 120.4° |
| N3 | C4 | C5 | 119.9° | 119.4° |
| C4 | N3 | HN3 | 119.8° | 119.8° |
| O4 | C4 | C5 | 120.0° | 120.2° |
| C4 | C5 | C6 | 119.6° | 119.1° |
| C4 | C5 | H5 | 120.2° | 120.5° |
| C6 | C5 | H5 | 120.2° | 120.4° |
| C5 | C6 | H6 | 120.5° | 120.2° |
| C2' | C1' | O4' | 106.2° | 103.5° |
| C1' | C2' | O2' | 111.4° | 110.9° |
| C1' | C2' | C3' | 101.3° | 102.1° |
| C2' | C1' | H1' | 108.3° | 110.7° |
| C1' | C2' | H2' | 115.6° | 110.9° |
| C1' | O4' | C4' | 109.9° | 106.9° |
| O4' | C1' | H1' | 114.0° | 110.7° |
| O2' | C2' | C3' | 115.0° | 110.9° |
| O2' | C2' | H2' | 102.1° | 110.9° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| C2' | C3' | O3' | 109.7° | 110.5° |
| C2' | C3' | C4' | 102.7° | 104.2° |
| C3' | C2' | H2' | 112.0° | 110.9° |
| C2' | C3' | H3' | 113.5° | 110.5° |
| O3' | C3' | C4' | 109.0° | 110.5° |
| O3' | C3' | H3' | 107.7° | 110.4° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C3' | C4' | O4' | 105.9° | 107.3° |
| C3' | C4' | C5' | 115.2° | 109.9° |
| C4' | C3' | H3' | 114.2° | 110.6° |
| C3' | C4' | H4' | 108.1° | 109.9° |
| O4' | C4' | C5' | 109.2° | 109.8° |
| O4' | C4' | H4' | 114.1° | 109.9° |
| C4' | C5' | O5' | 112.0° | 109.5° |
| C5' | C4' | H4' | 104.6° | 110.0° |
| C4' | C5' | H5' | 108.6° | 109.4° |
| C4' | C5' | H5'A | 108.6° | 109.5° |
| O5' | C5' | H5' | 108.6° | 109.5° |
| O5' | C5' | H5'A | 108.7° | 109.5° |
| C5' | O5' | HO5' | 109.5° | 114.0° |
| H5' | C5' | H5'A | 110.3° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | C1' | 178.4° | 179.7° |
| N1 | C2 | S2 | N3 | 178.8° | 180.0° |
| N1 | C2 | N3 | C4 | 1.2° | 0.1° |
| C2 | N1 | C6 | C5 | 0.7° | 0.0° |
| C2 | N1 | C1' | C2' | 156.0° | 115.0° |
| C2 | N1 | C1' | O4' | 85.9° | 130.9° |
| N1 | C2 | N3 | HN3 | 178.8° | 180.0° |
| C2 | N1 | C6 | H6 | 179.3° | 180.0° |
| C2 | N1 | C1' | H1' | 36.9° | 7.9° |
| C6 | N1 | C2 | S2 | 178.9° | 180.0° |
| C6 | N1 | C2 | N3 | 0.1° | 0.0° |
| N1 | C6 | C5 | C4 | 0.4° | 0.0° |
| N1 | C6 | C5 | H6 | 180.0° | 180.0° |
| C6 | N1 | C1' | C2' | 25.5° | 65.2° |
| C6 | N1 | C1' | O4' | 92.6° | 48.8° |
| N1 | C6 | C5 | H5 | 179.5° | 179.9° |
| C6 | N1 | C1' | H1' | 144.6° | 171.8° |
| C1' | N1 | C2 | S2 | 0.4° | 0.3° |
| C1' | N1 | C2 | N3 | 178.4° | 179.7° |
| C1' | N1 | C6 | C5 | 179.1° | 179.7° |
| N1 | C1' | C2' | O4' | 119.5° | 118.4° |
| N1 | C1' | C2' | H1' | 117.7° | 122.9° |
| N1 | C1' | O4' | H1' | 117.8° | 122.9° |
| N1 | C1' | C2' | O2' | 83.8° | 86.3° |
| N1 | C1' | C2' | C3' | 153.5° | 155.5° |
| N1 | C1' | O4' | C4' | 141.4° | 158.6° |
| C1' | N1 | C6 | H6 | 0.9° | 0.3° |
| N1 | C1' | C2' | H2' | 32.2° | 37.3° |
| S2 | C2 | N3 | C4 | 179.9° | 180.0° |
| S2 | C2 | N3 | HN3 | 0.1° | 0.0° |
| C2 | N3 | C4 | HN3 | 180.0° | 180.0° |
| C2 | N3 | C4 | O4 | 179.0° | 180.0° |
| C2 | N3 | C4 | C5 | 1.4° | 0.0° |
| N3 | C4 | O4 | C5 | 179.6° | 179.9° |
| N3 | C4 | C5 | C6 | 0.6° | 0.0° |
| N3 | C4 | C5 | H5 | 179.5° | 180.0° |
| O4 | C4 | C5 | C6 | 179.8° | 180.0° |
| O4 | C4 | N3 | HN3 | 1.0° | 0.0° |
| O4 | C4 | C5 | H5 | 0.1° | 0.1° |
| C4 | C5 | C6 | H5 | 180.0° | 180.0° |
| C5 | C4 | N3 | HN3 | 178.6° | 180.0° |
| C4 | C5 | C6 | H6 | 179.5° | 180.0° |
| C2' | C1' | O4' | H1' | 119.1° | 118.6° |
| C1' | C2' | O2' | C3' | 114.5° | 112.6° |
| C1' | C2' | O2' | H2' | 123.9° | 123.7° |
| C1' | C2' | C3' | H2' | 123.8° | 118.3° |
| C1' | C2' | C3' | O3' | 79.6° | 97.8° |
| C1' | C2' | C3' | C4' | 36.2° | 20.9° |
| C2' | C1' | O4' | C4' | 18.2° | 40.1° |
| C1' | C2' | O2' | HO2' | 180.0° | 180.0° |
| C1' | C2' | C3' | H3' | 159.9° | 139.7° |
| O4' | C1' | C2' | O2' | 156.8° | 155.2° |
| O4' | C1' | C2' | C3' | 34.0° | 37.1° |
| C1' | O4' | C4' | C3' | 5.5° | 26.5° |
| C1' | O4' | C4' | C5' | 119.0° | 145.9° |
| O4' | C1' | C2' | H2' | 87.3° | 81.2° |
| C1' | O4' | C4' | H4' | 124.3° | 92.9° |
| O2' | C2' | C3' | H2' | 116.0° | 123.6° |
| O2' | C2' | C3' | O3' | 40.6° | 20.3° |
| O2' | C2' | C3' | C4' | 156.4° | 139.0° |
| O2' | C2' | C1' | H1' | 34.0° | 36.5° |
| O2' | C2' | C3' | H3' | 79.8° | 102.2° |
| C2' | C3' | O3' | C4' | 111.7° | 114.8° |
| C2' | C3' | O3' | H3' | 124.0° | 122.6° |
| C2' | C3' | C4' | H3' | 123.3° | 118.8° |
| C2' | C3' | C4' | O4' | 26.6° | 2.0° |
| C2' | C3' | C4' | C5' | 94.2° | 121.4° |
| C3' | C2' | C1' | H1' | 88.8° | 81.6° |
| C3' | C2' | O2' | HO2' | 65.5° | 67.4° |
| C2' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C2' | C3' | C4' | H4' | 149.3° | 117.4° |
| O3' | C3' | C4' | H3' | 120.4° | 122.5° |
| O3' | C3' | C4' | O4' | 89.7° | 120.7° |
| O3' | C3' | C4' | C5' | 149.6° | 119.9° |
| O3' | C3' | C2' | H2' | 156.6° | 144.0° |
| O3' | C3' | C4' | H4' | 33.0° | 1.3° |
| C3' | C4' | O4' | C5' | 124.6° | 119.4° |
| C3' | C4' | O4' | H4' | 118.7° | 119.4° |
| C3' | C4' | C5' | H4' | 118.5° | 121.1° |
| C3' | C4' | C5' | O5' | 166.3° | 175.0° |
| C4' | C3' | C2' | H2' | 87.6° | 97.3° |
| C4' | C3' | O3' | HO3' | 68.3° | 65.2° |
| C3' | C4' | C5' | H5' | 46.3° | 55.0° |
| C3' | C4' | C5' | H5'A | 73.7° | 64.9° |
| O4' | C4' | C5' | H4' | 122.6° | 121.1° |
| O4' | C4' | C5' | O5' | 74.8° | 67.2° |
| C4' | O4' | C1' | H1' | 100.9° | 78.5° |
| O4' | C4' | C3' | H3' | 149.9° | 116.7° |
| O4' | C4' | C5' | H5' | 165.2° | 172.8° |
| O4' | C4' | C5' | H5'A | 45.2° | 52.8° |
| C4' | C5' | O5' | H5' | 120.0° | 120.0° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.1° |
| C5' | C4' | C3' | H3' | 29.1° | 2.6° |
| C4' | C5' | H5' | H5'A | 118.9° | 120.0° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| O5' | C5' | C4' | H4' | 47.8° | 53.9° |
| O5' | C5' | H5' | H5'A | 119.0° | 120.0° |
| H5 | C5 | C6 | H6 | 0.5° | 0.0° |
| H1' | C1' | C2' | H2' | 149.9° | 160.2° |
| H2' | C2' | O2' | HO2' | 56.1° | 56.3° |
| H2' | C2' | C3' | H3' | 36.2° | 21.5° |
| H3' | C3' | O3' | HO3' | 56.1° | 57.5° |
| H3' | C3' | C4' | H4' | 87.4° | 123.8° |
| H4' | C4' | C5' | H5' | 72.2° | 66.1° |
| H4' | C4' | C5' | H5'A | 167.8° | 173.9° |
| H5' | C5' | O5' | HO5' | 60.0° | 60.1° |
| H5'A | C5' | O5' | HO5' | 60.0° | 59.9° |
