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Summary Geometry Related PDB entries

2RP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C2	sing	1.53Å	1.51Å
C2	C6	sing	1.53Å	1.53Å
C6	C9	sing	1.53Å	1.52Å
C9	C13	sing	1.53Å	1.53Å
C9	O17	sing	1.43Å	1.43Å
C1	H1	sing	1.09Å	1.10Å
C1	H1A	sing	1.09Å	1.10Å
C1	H1B	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
C2	H2A	sing	1.09Å	1.10Å
C6	H6	sing	1.09Å	1.10Å
C6	H6A	sing	1.09Å	1.10Å
C9	H9	sing	1.09Å	1.10Å
C13	H13	sing	1.09Å	1.10Å
C13	H13A	sing	1.09Å	1.10Å
C13	H13B	sing	1.09Å	1.10Å
O17	HO17	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C1	C2	C6	111.7°	109.5°
C2	C1	H1	109.5°	109.5°
C2	C1	H1A	109.5°	109.5°
C2	C1	H1B	109.5°	109.5°
C1	C2	H2	108.7°	109.5°
C1	C2	H2A	108.2°	109.4°
C2	C6	C9	117.0°	109.5°
C6	C2	H2	108.7°	109.5°
C6	C2	H2A	108.2°	109.5°
C2	C6	H6	107.0°	109.5°
C2	C6	H6A	105.3°	109.4°
C6	C9	C13	116.0°	109.4°
C6	C9	O17	111.0°	109.5°
C9	C6	H6	107.0°	109.5°
C9	C6	H6A	105.3°	109.5°
C6	C9	H9	104.0°	109.5°
C13	C9	O17	110.6°	109.4°
C13	C9	H9	104.4°	109.5°
C9	C13	H13	109.5°	109.5°
C9	C13	H13A	109.5°	109.5°
C9	C13	H13B	109.5°	109.5°
O17	C9	H9	110.2°	109.5°
C9	O17	HO17	109.5°	114.0°
H1	C1	H1A	109.5°	109.5°
H1	C1	H1B	109.4°	109.4°
H1A	C1	H1B	109.5°	109.5°
H2	C2	H2A	111.3°	109.5°
H6	C6	H6A	115.6°	109.5°
H13	C13	H13A	109.5°	109.5°
H13	C13	H13B	109.5°	109.5°
H13A	C13	H13B	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C1	C2	C6	H2	120.0°	120.0°
C1	C2	C6	H2A	119.0°	120.0°
C1	C2	C6	C9	78.5°	180.0°
C2	C1	H1	H1A	120.0°	120.0°
C2	C1	H1	H1B	120.0°	120.0°
C2	C1	H1A	H1B	120.0°	120.0°
C1	C2	H2	H2A	119.1°	120.0°
C1	C2	C6	H6	161.5°	60.0°
C1	C2	C6	H6A	38.0°	60.0°
C2	C6	C9	H6	120.0°	120.0°
C2	C6	C9	H6A	116.5°	120.0°
C2	C6	C9	C13	3.6°	175.1°
C2	C6	C9	O17	131.0°	65.0°
C6	C2	C1	H1	168.3°	180.0°
C6	C2	C1	H1A	71.7°	60.1°
C6	C2	C1	H1B	48.4°	60.0°
C6	C2	H2	H2A	119.1°	120.0°
C2	C6	H6	H6A	116.9°	119.9°
C2	C6	C9	H9	110.5°	55.1°
C6	C9	C13	O17	127.6°	120.0°
C6	C9	C13	H9	113.8°	120.0°
C6	C9	O17	H9	114.7°	120.0°
C9	C6	C2	H2	41.4°	60.0°
C9	C6	C2	H2A	162.4°	60.0°
C9	C6	H6	H6A	116.9°	120.0°
C6	C9	C13	H13	147.3°	60.0°
C6	C9	C13	H13A	92.7°	179.9°
C6	C9	C13	H13B	27.3°	60.1°
C6	C9	O17	HO17	132.4°	59.9°
C13	C9	O17	H9	115.0°	120.0°
C13	C9	C6	H6	116.4°	55.0°
C13	C9	C6	H6A	120.1°	65.0°
C9	C13	H13	H13A	120.0°	120.1°
C9	C13	H13	H13B	120.0°	120.1°
C9	C13	H13A	H13B	120.0°	119.9°
C13	C9	O17	HO17	97.3°	60.0°
O17	C9	C6	H6	11.1°	175.0°
O17	C9	C6	H6A	112.5°	55.0°
O17	C9	C13	H13	19.7°	60.0°
O17	C9	C13	H13A	139.7°	60.1°
O17	C9	C13	H13B	100.3°	179.9°
H1	C1	H1A	H1B	120.0°	120.0°
H1	C1	C2	H2	71.7°	60.0°
H1	C1	C2	H2A	49.3°	60.0°
H1A	C1	C2	H2	48.3°	60.0°
H1A	C1	C2	H2A	169.3°	180.0°
H1B	C1	C2	H2	168.4°	179.9°
H1B	C1	C2	H2A	70.6°	60.0°
H2	C2	C6	H6	78.5°	180.0°
H2	C2	C6	H6A	157.9°	60.0°
H2A	C2	C6	H6	42.5°	60.0°
H2A	C2	C6	H6A	81.1°	180.0°
H6	C6	C9	H9	129.5°	65.0°
H6A	C6	C9	H9	6.0°	175.0°
H9	C9	C13	H13	98.9°	180.0°
H9	C9	C13	H13A	21.1°	60.0°
H9	C9	C13	H13B	141.1°	59.9°
H9	C9	O17	HO17	17.7°	180.0°
H13	C13	H13A	H13B	120.0°	120.0°

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