2MU
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.35Å | 1.36Å | |
| N1 | C6 | sing | 1.37Å | 1.37Å | |
| N1 | C1' | sing | 1.46Å | 1.47Å | |
| C2 | N3 | sing | 1.35Å | 1.37Å | |
| C2 | O2 | doub | 1.22Å | 1.22Å | |
| N3 | C4 | sing | 1.35Å | 1.37Å | |
| N3 | HN3 | sing | 0.97Å | 1.02Å | |
| C4 | C5 | sing | 1.41Å | 1.43Å | |
| C4 | O4 | doub | 1.22Å | 1.22Å | |
| C5 | C5M | sing | 1.51Å | 1.49Å | |
| C5 | C6 | doub | 1.35Å | 1.33Å | |
| C5M | HM51 | sing | 1.09Å | 1.11Å | |
| C5M | HM52 | sing | 1.09Å | 1.12Å | |
| C5M | HM53 | sing | 1.09Å | 1.12Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å | |
| C1' | C2' | sing | 1.55Å | 1.53Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | C6' | sing | 1.43Å | 1.42Å | |
| C3' | C4' | sing | 1.54Å | 1.52Å | |
| C3' | O3' | sing | 1.43Å | 1.40Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| C5' | H5' | sing | 1.09Å | 1.11Å | |
| C5' | H5'' | sing | 1.09Å | 1.11Å | |
| O5' | P | sing | 1.61Å | 1.59Å | |
| C6' | H6'1 | sing | 1.09Å | 1.11Å | |
| C6' | H6'2 | sing | 1.09Å | 1.12Å | |
| C6' | H6'3 | sing | 1.09Å | 1.12Å | |
| P | OP1 | doub | 1.48Å | 1.49Å | |
| P | OP2 | sing | 1.61Å | 1.49Å | |
| P | OP3 | sing | 1.61Å | 1.60Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 121.4° | 120.6° |
| C2 | N1 | C1' | 116.8° | 119.7° |
| N1 | C2 | N3 | 114.8° | 120.9° |
| N1 | C2 | O2 | 122.4° | 119.5° |
| C6 | N1 | C1' | 121.8° | 119.7° |
| N1 | C6 | C5 | 123.3° | 119.7° |
| N1 | C6 | H6 | 119.8° | 120.2° |
| N1 | C1' | C2' | 108.6° | 110.8° |
| N1 | C1' | O4' | 108.7° | 110.6° |
| N1 | C1' | H1' | 109.7° | 110.5° |
| N3 | C2 | O2 | 122.9° | 119.6° |
| C2 | N3 | C4 | 127.0° | 120.3° |
| C2 | N3 | HN3 | 116.4° | 119.9° |
| C4 | N3 | HN3 | 116.7° | 119.8° |
| N3 | C4 | C5 | 115.2° | 119.4° |
| N3 | C4 | O4 | 120.0° | 120.4° |
| C5 | C4 | O4 | 124.8° | 120.3° |
| C4 | C5 | C5M | 119.0° | 120.5° |
| C4 | C5 | C6 | 118.1° | 119.1° |
| C5M | C5 | C6 | 122.9° | 120.4° |
| C5 | C5M | HM51 | 119.0° | 109.4° |
| C5 | C5M | HM52 | 108.8° | 109.5° |
| C5 | C5M | HM53 | 108.8° | 109.5° |
| C5 | C6 | H6 | 116.9° | 120.1° |
| HM51 | C5M | HM52 | 108.8° | 109.5° |
| HM51 | C5M | HM53 | 108.8° | 109.4° |
| HM52 | C5M | HM53 | 101.2° | 109.5° |
| C2' | C1' | O4' | 107.1° | 103.5° |
| C2' | C1' | H1' | 111.3° | 110.6° |
| C1' | C2' | O2' | 113.4° | 111.0° |
| C1' | C2' | C3' | 101.0° | 102.1° |
| C1' | C2' | H2' | 113.4° | 110.9° |
| O4' | C1' | H1' | 111.3° | 110.6° |
| C1' | O4' | C4' | 109.6° | 107.0° |
| O2' | C2' | C3' | 111.8° | 110.9° |
| O2' | C2' | H2' | 102.9° | 110.8° |
| C2' | O2' | C6' | 101.0° | 106.8° |
| C3' | C2' | H2' | 114.9° | 110.9° |
| C2' | C3' | C4' | 102.3° | 104.2° |
| C2' | C3' | O3' | 109.7° | 110.5° |
| C2' | C3' | H3' | 114.5° | 110.5° |
| O2' | C6' | H6'1 | 101.0° | 109.5° |
| O2' | C6' | H6'2 | 115.5° | 109.5° |
| O2' | C6' | H6'3 | 115.4° | 109.5° |
| C4' | C3' | O3' | 111.3° | 110.6° |
| C4' | C3' | H3' | 113.1° | 110.5° |
| C3' | C4' | O4' | 103.8° | 107.3° |
| C3' | C4' | C5' | 115.6° | 109.9° |
| C3' | C4' | H4' | 109.2° | 109.9° |
| O3' | C3' | H3' | 106.0° | 110.4° |
| C3' | O3' | HO3' | 109.7° | 106.8° |
| O4' | C4' | C5' | 109.0° | 110.0° |
| O4' | C4' | H4' | 115.8° | 109.9° |
| C5' | C4' | H4' | 104.0° | 109.8° |
| C4' | C5' | O5' | 110.4° | 109.5° |
| C4' | C5' | H5' | 111.9° | 109.4° |
| C4' | C5' | H5'' | 111.9° | 109.5° |
| O5' | C5' | H5' | 111.8° | 109.4° |
| O5' | C5' | H5'' | 111.8° | 109.5° |
| C5' | O5' | P | 120.1° | 106.8° |
| H5' | C5' | H5'' | 98.6° | 109.5° |
| O5' | P | OP1 | 110.0° | 109.5° |
| O5' | P | OP2 | 108.0° | 109.5° |
| O5' | P | OP3 | 103.8° | 109.5° |
| H6'1 | C6' | H6'2 | 115.5° | 109.4° |
| H6'1 | C6' | H6'3 | 115.5° | 109.5° |
| H6'2 | C6' | H6'3 | 94.9° | 109.5° |
| OP1 | P | OP2 | 119.8° | 109.4° |
| OP1 | P | OP3 | 105.9° | 109.5° |
| OP2 | P | OP3 | 108.1° | 109.5° |
| P | OP2 | HOP2 | 107.9° | 106.8° |
| P | OP3 | HOP3 | 103.8° | 106.8° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | C1' | 177.1° | 179.7° |
| N1 | C2 | N3 | O2 | 179.4° | 179.5° |
| N1 | C2 | N3 | C4 | 1.8° | 0.5° |
| N1 | C2 | N3 | HN3 | 178.2° | 179.7° |
| C2 | N1 | C6 | C5 | 4.1° | 0.2° |
| C2 | N1 | C6 | H6 | 175.9° | 179.7° |
| C2 | N1 | C1' | C2' | 84.2° | 56.0° |
| C2 | N1 | C1' | O4' | 159.5° | 58.3° |
| C2 | N1 | C1' | H1' | 37.7° | 178.9° |
| C6 | N1 | C2 | N3 | 4.9° | 0.5° |
| C6 | N1 | C2 | O2 | 174.5° | 180.0° |
| N1 | C6 | C5 | C4 | 0.2° | 0.0° |
| N1 | C6 | C5 | C5M | 179.7° | 180.0° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C6 | N1 | C1' | C2' | 93.0° | 124.3° |
| C6 | N1 | C1' | O4' | 23.2° | 121.4° |
| C6 | N1 | C1' | H1' | 145.1° | 1.4° |
| C1' | N1 | C2 | N3 | 172.4° | 179.8° |
| C1' | N1 | C2 | O2 | 8.2° | 0.3° |
| C1' | N1 | C6 | C5 | 173.0° | 179.9° |
| C1' | N1 | C6 | H6 | 7.0° | 0.0° |
| N1 | C1' | C2' | O4' | 117.2° | 118.6° |
| N1 | C1' | C2' | H1' | 120.9° | 122.9° |
| N1 | C1' | O4' | H1' | 121.0° | 122.8° |
| N1 | C1' | C2' | O2' | 149.0° | 86.2° |
| N1 | C1' | C2' | C3' | 91.3° | 155.6° |
| N1 | C1' | C2' | H2' | 32.1° | 37.4° |
| N1 | C1' | O4' | C4' | 114.7° | 158.7° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.8° |
| C2 | N3 | C4 | C5 | 2.1° | 0.2° |
| C2 | N3 | C4 | O4 | 177.1° | 179.7° |
| O2 | C2 | N3 | C4 | 177.6° | 180.0° |
| O2 | C2 | N3 | HN3 | 2.4° | 0.2° |
| N3 | C4 | C5 | O4 | 179.2° | 180.0° |
| N3 | C4 | C5 | C5M | 176.8° | 180.0° |
| N3 | C4 | C5 | C6 | 3.1° | 0.0° |
| HN3 | N3 | C4 | C5 | 177.8° | 180.0° |
| HN3 | N3 | C4 | O4 | 3.0° | 0.1° |
| C4 | C5 | C5M | C6 | 179.9° | 180.0° |
| C4 | C5 | C5M | HM51 | 180.0° | 0.0° |
| C4 | C5 | C5M | HM52 | 54.7° | 120.0° |
| C4 | C5 | C5M | HM53 | 54.7° | 120.0° |
| C4 | C5 | C6 | H6 | 179.8° | 180.0° |
| O4 | C4 | C5 | C5M | 4.1° | 0.0° |
| O4 | C4 | C5 | C6 | 176.1° | 180.0° |
| C5 | C5M | HM51 | HM52 | 125.3° | 120.0° |
| C5 | C5M | HM51 | HM53 | 125.3° | 120.0° |
| C5 | C5M | HM52 | HM53 | 114.4° | 120.0° |
| C5M | C5 | C6 | H6 | 0.3° | 0.1° |
| C6 | C5 | C5M | HM51 | 0.1° | 180.0° |
| C6 | C5 | C5M | HM52 | 125.4° | 59.9° |
| C6 | C5 | C5M | HM53 | 125.2° | 60.1° |
| HM51 | C5M | HM52 | HM53 | 114.5° | 120.0° |
| C2' | C1' | O4' | H1' | 121.9° | 118.5° |
| C1' | C2' | O2' | C3' | 113.3° | 112.8° |
| C1' | C2' | O2' | H2' | 122.8° | 123.6° |
| C1' | C2' | C3' | H2' | 122.4° | 118.1° |
| C1' | C2' | O2' | C6' | 56.6° | 152.9° |
| C1' | C2' | C3' | C4' | 38.3° | 20.8° |
| C1' | C2' | C3' | O3' | 156.5° | 98.0° |
| C1' | C2' | C3' | H3' | 84.4° | 139.5° |
| C2' | C1' | O4' | C4' | 2.5° | 40.0° |
| O4' | C1' | C2' | O2' | 93.8° | 155.2° |
| O4' | C1' | C2' | C3' | 25.9° | 36.9° |
| O4' | C1' | C2' | H2' | 149.4° | 81.2° |
| C1' | O4' | C4' | C3' | 22.2° | 26.5° |
| C1' | O4' | C4' | C5' | 145.9° | 146.0° |
| C1' | O4' | C4' | H4' | 97.4° | 93.0° |
| H1' | C1' | C2' | O2' | 28.0° | 36.7° |
| H1' | C1' | C2' | C3' | 147.8° | 81.6° |
| H1' | C1' | C2' | H2' | 88.8° | 160.3° |
| H1' | C1' | O4' | C4' | 124.4° | 78.5° |
| O2' | C2' | C3' | H2' | 116.8° | 123.6° |
| O2' | C2' | C3' | C4' | 82.6° | 139.1° |
| O2' | C2' | C3' | O3' | 35.6° | 20.3° |
| O2' | C2' | C3' | H3' | 154.7° | 102.2° |
| C2' | O2' | C6' | H6'1 | 180.0° | 180.0° |
| C2' | O2' | C6' | H6'2 | 54.7° | 60.0° |
| C2' | O2' | C6' | H6'3 | 54.7° | 60.0° |
| C3' | C2' | O2' | C6' | 170.0° | 94.3° |
| C2' | C3' | C4' | O3' | 117.1° | 118.7° |
| C2' | C3' | C4' | H3' | 123.7° | 118.7° |
| C2' | C3' | O3' | H3' | 124.2° | 122.5° |
| C2' | C3' | C4' | O4' | 37.9° | 2.0° |
| C2' | C3' | C4' | C5' | 157.2° | 121.6° |
| C2' | C3' | C4' | H4' | 86.1° | 117.4° |
| C2' | C3' | O3' | HO3' | 180.0° | 180.0° |
| H2' | C2' | O2' | C6' | 66.2° | 29.3° |
| H2' | C2' | C3' | C4' | 160.6° | 97.3° |
| H2' | C2' | C3' | O3' | 81.1° | 143.8° |
| H2' | C2' | C3' | H3' | 37.9° | 21.4° |
| O2' | C6' | H6'1 | H6'2 | 125.3° | 120.0° |
| O2' | C6' | H6'1 | H6'3 | 125.3° | 120.0° |
| O2' | C6' | H6'2 | H6'3 | 121.3° | 120.0° |
| C4' | C3' | O3' | H3' | 123.4° | 122.6° |
| C3' | C4' | O4' | C5' | 123.7° | 119.5° |
| C3' | C4' | O4' | H4' | 119.6° | 119.5° |
| C3' | C4' | C5' | H4' | 119.6° | 121.0° |
| C4' | C3' | O3' | HO3' | 67.6° | 65.2° |
| C3' | C4' | C5' | O5' | 53.9° | 180.0° |
| C3' | C4' | C5' | H5' | 179.1° | 60.0° |
| C3' | C4' | C5' | H5'' | 71.4° | 60.0° |
| O3' | C3' | C4' | O4' | 155.0° | 120.8° |
| O3' | C3' | C4' | C5' | 85.7° | 119.7° |
| O3' | C3' | C4' | H4' | 31.0° | 1.3° |
| H3' | C3' | C4' | O4' | 85.7° | 116.7° |
| H3' | C3' | C4' | C5' | 33.5° | 2.9° |
| H3' | C3' | C4' | H4' | 150.3° | 123.9° |
| H3' | C3' | O3' | HO3' | 55.8° | 57.5° |
| O4' | C4' | C5' | H4' | 124.0° | 121.0° |
| O4' | C4' | C5' | O5' | 62.5° | 62.1° |
| O4' | C4' | C5' | H5' | 62.7° | 177.9° |
| O4' | C4' | C5' | H5'' | 172.3° | 57.9° |
| C4' | C5' | O5' | H5' | 125.2° | 119.9° |
| C4' | C5' | O5' | H5'' | 125.3° | 120.0° |
| C4' | C5' | H5' | H5'' | 117.8° | 120.0° |
| C4' | C5' | O5' | P | 175.3° | 180.0° |
| H4' | C4' | C5' | O5' | 173.5° | 58.9° |
| H4' | C4' | C5' | H5' | 61.3° | 61.0° |
| H4' | C4' | C5' | H5'' | 48.3° | 179.0° |
| O5' | C5' | H5' | H5'' | 117.8° | 120.0° |
| C5' | O5' | P | OP1 | 177.3° | 60.0° |
| C5' | O5' | P | OP2 | 44.8° | 180.0° |
| C5' | O5' | P | OP3 | 69.7° | 60.0° |
| H5' | C5' | O5' | P | 50.1° | 60.0° |
| H5'' | C5' | O5' | P | 59.4° | 60.0° |
| O5' | P | OP1 | OP2 | 126.0° | 120.0° |
| O5' | P | OP1 | OP3 | 111.6° | 120.0° |
| O5' | P | OP2 | OP3 | 111.7° | 120.1° |
| O5' | P | OP2 | HOP2 | 180.0° | 180.0° |
| O5' | P | OP3 | HOP3 | 179.9° | 60.1° |
| H6'1 | C6' | H6'2 | H6'3 | 121.3° | 120.0° |
| OP1 | P | OP2 | OP3 | 121.3° | 120.0° |
| OP1 | P | OP2 | HOP2 | 53.0° | 60.0° |
| OP1 | P | OP3 | HOP3 | 64.0° | 179.9° |
| OP2 | P | OP3 | HOP3 | 65.6° | 60.0° |
| OP3 | P | OP2 | HOP2 | 68.4° | 59.9° |
