2LF
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP2 | sing | 1.61Å | 1.48Å | |
| P | O5' | sing | 1.61Å | 1.62Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N1 | C2 | sing | 1.36Å | 1.34Å | |
| C2 | N2 | sing | 1.37Å | 1.30Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N3 | C2 | doub | 1.32Å | 1.32Å | |
| C4 | N3 | sing | 1.34Å | 1.35Å | |
| C5 | C4 | doub | 1.41Å | 1.37Å | Aromatic |
| C5 | C6 | sing | 1.42Å | 1.44Å | |
| C6 | N1 | sing | 1.36Å | 1.37Å | |
| O6 | C6 | doub | 1.22Å | 1.23Å | |
| N7 | C5 | sing | 1.35Å | 1.41Å | Aromatic |
| N7 | C8 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | N9 | sing | 1.38Å | 1.36Å | Aromatic |
| N9 | C4 | sing | 1.34Å | 1.36Å | Aromatic |
| N9 | C1' | sing | 1.47Å | 1.46Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C1' | C2' | sing | 1.55Å | 1.51Å | |
| OP3 | P | sing | 1.61Å | 1.48Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| C2' | H'2' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | C3' | sing | 1.54Å | 1.55Å | |
| O4' | C1' | sing | 1.45Å | 1.42Å | |
| O4' | C4' | sing | 1.46Å | 1.43Å | |
| C5' | C8 | sing | 1.51Å | 1.54Å | |
| C5' | C4' | sing | 1.54Å | 1.56Å | |
| O5' | C5' | sing | 1.43Å | 1.43Å | |
| H4' | C4' | sing | 1.09Å | 1.10Å | |
| H5' | C5' | sing | 1.09Å | 1.10Å | |
| P | OP1 | doub | 1.48Å | 1.43Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP2 | P | O5' | 110.1° | 109.5° |
| OP2 | P | OP3 | 119.7° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP2 | P | OP1 | 98.4° | 109.5° |
| O5' | P | OP3 | 108.6° | 109.5° |
| P | O5' | C5' | 120.5° | 123.0° |
| O5' | P | OP1 | 119.9° | 109.5° |
| HN1 | N1 | C2 | 118.1° | 119.2° |
| HN1 | N1 | C6 | 118.0° | 119.1° |
| N1 | C2 | N2 | 116.7° | 118.2° |
| N1 | C2 | N3 | 125.5° | 123.7° |
| C2 | N1 | C6 | 123.9° | 121.7° |
| C2 | N2 | HN2A | 120.0° | 120.0° |
| C2 | N2 | HN2 | 120.0° | 120.0° |
| N2 | C2 | N3 | 117.7° | 118.2° |
| HN2A | N2 | HN2 | 120.0° | 120.0° |
| C2 | N3 | C4 | 111.7° | 118.3° |
| N3 | C4 | C5 | 128.9° | 120.7° |
| N3 | C4 | N9 | 124.8° | 133.6° |
| C4 | C5 | C6 | 116.5° | 120.0° |
| C4 | C5 | N7 | 109.7° | 107.6° |
| C5 | C4 | N9 | 106.4° | 105.8° |
| C5 | C6 | N1 | 113.5° | 115.6° |
| C5 | C6 | O6 | 130.3° | 122.2° |
| C6 | C5 | N7 | 133.7° | 132.3° |
| N1 | C6 | O6 | 116.2° | 122.2° |
| C5 | N7 | C8 | 103.2° | 109.1° |
| N7 | C8 | N9 | 113.9° | 109.6° |
| N7 | C8 | C5' | 129.3° | 128.6° |
| C8 | N9 | C4 | 106.6° | 107.9° |
| C8 | N9 | C1' | 124.8° | 121.3° |
| N9 | C8 | C5' | 116.5° | 121.9° |
| C4 | N9 | C1' | 128.2° | 130.8° |
| N9 | C1' | H1' | 109.2° | 113.4° |
| N9 | C1' | C2' | 108.4° | 105.7° |
| N9 | C1' | O4' | 107.7° | 105.6° |
| H1' | C1' | C2' | 114.1° | 113.4° |
| H1' | C1' | O4' | 114.7° | 113.4° |
| C1' | C2' | H'2' | 111.1° | 110.6° |
| C1' | C2' | H2' | 111.1° | 110.6° |
| C1' | C2' | C3' | 104.6° | 103.7° |
| C2' | C1' | O4' | 102.3° | 104.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| OP3 | P | OP1 | 100.3° | 109.5° |
| H'2' | C2' | H2' | 107.7° | 110.5° |
| H'2' | C2' | C3' | 111.1° | 110.5° |
| H2' | C2' | C3' | 111.2° | 110.7° |
| C2' | C3' | H3' | 116.8° | 110.4° |
| C2' | C3' | O3' | 106.9° | 110.4° |
| C2' | C3' | C4' | 102.3° | 104.5° |
| H3' | C3' | O3' | 106.9° | 110.4° |
| H3' | C3' | C4' | 111.2° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| O3' | C3' | C4' | 112.9° | 110.5° |
| C3' | C4' | O4' | 104.1° | 105.5° |
| C3' | C4' | C5' | 115.5° | 111.7° |
| C3' | C4' | H4' | 108.1° | 110.6° |
| C1' | O4' | C4' | 104.7° | 104.3° |
| O4' | C4' | C5' | 105.9° | 107.5° |
| O4' | C4' | H4' | 117.3° | 110.5° |
| C8 | C5' | C4' | 109.2° | 108.0° |
| C8 | C5' | O5' | 115.7° | 109.8° |
| C8 | C5' | H5' | 106.2° | 109.8° |
| C4' | C5' | O5' | 111.8° | 108.5° |
| C5' | C4' | H4' | 106.3° | 110.9° |
| C4' | C5' | H5' | 110.5° | 111.0° |
| O5' | C5' | H5' | 103.2° | 109.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP2 | P | O5' | OP3 | 132.8° | 120.0° |
| OP2 | P | O5' | OP1 | 113.0° | 120.0° |
| OP2 | P | OP3 | OP1 | 105.9° | 120.0° |
| OP2 | P | OP3 | HOP3 | 106.0° | 60.0° |
| OP2 | P | O5' | C5' | 176.1° | 175.0° |
| O5' | P | OP3 | OP1 | 126.5° | 120.0° |
| O5' | P | OP3 | HOP3 | 126.5° | 60.0° |
| O5' | P | OP2 | HOP2 | 126.2° | 180.0° |
| P | O5' | C5' | C8 | 146.9° | 120.0° |
| P | O5' | C5' | C4' | 87.3° | 122.2° |
| P | O5' | C5' | H5' | 31.4° | 0.7° |
| HN1 | N1 | C2 | C6 | 180.0° | 179.7° |
| HN1 | N1 | C2 | N2 | 0.8° | 0.0° |
| HN1 | N1 | C2 | N3 | 179.3° | 180.0° |
| HN1 | N1 | C6 | C5 | 178.4° | 179.7° |
| HN1 | N1 | C6 | O6 | 2.3° | 0.1° |
| N1 | C2 | N2 | N3 | 178.5° | 180.0° |
| N1 | C2 | N2 | HN2A | 178.6° | 0.0° |
| N1 | C2 | N2 | HN2 | 1.5° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| C2 | N1 | C6 | C5 | 1.6° | 0.5° |
| C2 | N1 | C6 | O6 | 177.7° | 179.9° |
| C2 | N2 | HN2A | HN2 | 180.0° | 180.0° |
| N2 | C2 | N3 | C4 | 178.4° | 180.0° |
| N2 | C2 | N1 | C6 | 179.2° | 179.8° |
| HN2A | N2 | C2 | N3 | 0.0° | 180.0° |
| HN2 | N2 | C2 | N3 | 180.0° | 0.0° |
| C2 | N3 | C4 | C5 | 0.3° | 0.1° |
| N3 | C2 | N1 | C6 | 0.8° | 0.2° |
| C2 | N3 | C4 | N9 | 178.9° | 179.8° |
| N3 | C4 | C5 | N9 | 179.3° | 179.9° |
| N3 | C4 | C5 | C6 | 1.2° | 0.4° |
| N3 | C4 | C5 | N7 | 179.0° | 179.7° |
| N3 | C4 | N9 | C8 | 176.9° | 179.5° |
| N3 | C4 | N9 | C1' | 3.6° | 0.9° |
| C4 | C5 | C6 | N7 | 179.8° | 179.8° |
| C4 | C5 | C6 | N1 | 1.7° | 0.6° |
| C4 | C5 | C6 | O6 | 177.4° | 179.8° |
| C4 | C5 | N7 | C8 | 1.1° | 0.1° |
| C5 | C4 | N9 | C8 | 3.8° | 0.7° |
| C5 | C4 | N9 | C1' | 177.1° | 179.0° |
| C5 | C6 | N1 | O6 | 179.3° | 179.6° |
| C6 | C5 | N7 | C8 | 179.1° | 179.9° |
| C6 | C5 | C4 | N9 | 178.1° | 179.5° |
| N1 | C6 | C5 | N7 | 178.6° | 179.6° |
| O6 | C6 | C5 | N7 | 2.3° | 0.0° |
| C5 | N7 | C8 | N9 | 3.7° | 0.5° |
| N7 | C5 | C4 | N9 | 1.7° | 0.4° |
| C5 | N7 | C8 | C5' | 177.2° | 179.1° |
| N7 | C8 | N9 | C5' | 174.3° | 179.6° |
| N7 | C8 | N9 | C4 | 5.0° | 0.7° |
| N7 | C8 | N9 | C1' | 178.5° | 179.0° |
| N7 | C8 | C5' | C4' | 169.5° | 172.2° |
| N7 | C8 | C5' | O5' | 42.4° | 54.1° |
| N7 | C8 | C5' | H5' | 71.4° | 66.6° |
| C8 | N9 | C4 | C1' | 173.2° | 179.7° |
| C8 | N9 | C1' | H1' | 156.1° | 156.3° |
| C8 | N9 | C1' | C2' | 79.0° | 78.9° |
| C8 | N9 | C1' | O4' | 31.0° | 31.5° |
| N9 | C8 | C5' | C4' | 17.3° | 8.2° |
| N9 | C8 | C5' | O5' | 144.3° | 126.4° |
| N9 | C8 | C5' | H5' | 101.9° | 112.9° |
| C4 | N9 | C1' | H1' | 31.8° | 24.1° |
| C4 | N9 | C1' | C2' | 93.1° | 100.7° |
| C4 | N9 | C1' | O4' | 156.9° | 148.9° |
| C4 | N9 | C8 | C5' | 179.3° | 178.9° |
| N9 | C1' | H1' | C2' | 121.4° | 120.6° |
| N9 | C1' | H1' | O4' | 121.0° | 120.4° |
| N9 | C1' | C2' | O4' | 113.6° | 111.2° |
| N9 | C1' | C2' | H'2' | 159.9° | 35.7° |
| N9 | C1' | C2' | H2' | 39.9° | 158.4° |
| N9 | C1' | C2' | C3' | 80.1° | 82.9° |
| N9 | C1' | O4' | C4' | 66.3° | 69.3° |
| C1' | N9 | C8 | C5' | 7.2° | 1.4° |
| H1' | C1' | C2' | O4' | 124.5° | 124.0° |
| H1' | C1' | C2' | H'2' | 38.0° | 89.1° |
| H1' | C1' | C2' | H2' | 82.0° | 33.6° |
| H1' | C1' | C2' | C3' | 158.0° | 152.3° |
| H1' | C1' | O4' | C4' | 171.9° | 166.0° |
| C1' | C2' | H'2' | H2' | 122.0° | 122.8° |
| C1' | C2' | H'2' | C3' | 116.0° | 114.3° |
| C1' | C2' | H2' | C3' | 116.0° | 114.4° |
| C1' | C2' | C3' | H3' | 113.4° | 114.1° |
| C1' | C2' | C3' | O3' | 127.1° | 123.6° |
| C1' | C2' | C3' | C4' | 8.2° | 4.7° |
| C2' | C1' | O4' | C4' | 47.8° | 42.0° |
| OP3 | P | OP2 | HOP2 | 107.0° | 60.0° |
| OP3 | P | O5' | C5' | 43.3° | 65.0° |
| HOP3 | OP3 | P | OP1 | 0.0° | 180.0° |
| H'2' | C2' | H2' | C3' | 122.0° | 122.8° |
| H'2' | C2' | C3' | H3' | 126.6° | 4.4° |
| H'2' | C2' | C3' | O3' | 7.1° | 117.9° |
| H'2' | C2' | C3' | C4' | 111.8° | 123.2° |
| H'2' | C2' | C1' | O4' | 86.5° | 146.8° |
| H2' | C2' | C3' | H3' | 6.6° | 127.2° |
| H2' | C2' | C3' | O3' | 112.9° | 4.9° |
| H2' | C2' | C3' | C4' | 128.2° | 114.0° |
| H2' | C2' | C1' | O4' | 153.5° | 90.4° |
| HOP2 | OP2 | P | OP1 | 0.0° | 60.0° |
| C2' | C3' | H3' | O3' | 119.6° | 122.3° |
| C2' | C3' | H3' | C4' | 116.8° | 115.1° |
| C2' | C3' | O3' | C4' | 111.7° | 115.2° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.4° |
| C3' | C2' | C1' | O4' | 33.5° | 28.3° |
| C2' | C3' | C4' | O4' | 19.6° | 20.3° |
| C2' | C3' | C4' | C5' | 96.0° | 96.2° |
| C2' | C3' | C4' | H4' | 145.1° | 139.8° |
| H3' | C3' | O3' | C4' | 122.6° | 122.5° |
| H3' | C3' | O3' | HO3' | 54.3° | 60.9° |
| H3' | C3' | C4' | O4' | 145.0° | 139.0° |
| H3' | C3' | C4' | C5' | 29.3° | 22.6° |
| H3' | C3' | C4' | H4' | 89.6° | 101.4° |
| O3' | C3' | C4' | O4' | 94.9° | 98.5° |
| O3' | C3' | C4' | C5' | 149.4° | 145.0° |
| O3' | C3' | C4' | H4' | 30.5° | 21.0° |
| HO3' | O3' | C3' | C4' | 68.3° | 176.6° |
| C3' | C4' | O4' | C1' | 42.6° | 39.1° |
| C3' | C4' | O4' | C5' | 122.2° | 119.3° |
| C3' | C4' | O4' | H4' | 119.3° | 119.6° |
| C3' | C4' | C5' | C8 | 62.2° | 69.6° |
| C3' | C4' | C5' | H4' | 119.9° | 123.8° |
| C3' | C4' | C5' | O5' | 67.0° | 49.3° |
| C3' | C4' | C5' | H5' | 178.6° | 170.0° |
| C1' | O4' | C4' | C5' | 79.6° | 80.2° |
| C1' | O4' | C4' | H4' | 161.9° | 158.7° |
| O4' | C4' | C5' | C8 | 52.4° | 45.6° |
| O4' | C4' | C5' | H4' | 125.5° | 120.9° |
| O4' | C4' | C5' | O5' | 178.4° | 164.6° |
| O4' | C4' | C5' | H5' | 64.0° | 74.7° |
| C8 | C5' | C4' | O5' | 129.3° | 118.9° |
| C8 | C5' | C4' | H5' | 116.4° | 120.4° |
| C8 | C5' | O5' | H5' | 115.5° | 120.7° |
| C8 | C5' | C4' | H4' | 177.9° | 166.5° |
| C4' | C5' | O5' | H5' | 118.8° | 121.5° |
| O5' | C5' | C4' | H4' | 52.8° | 74.5° |
| C5' | O5' | P | OP1 | 71.0° | 55.0° |
| H4' | C4' | C5' | H5' | 61.5° | 46.2° |
