2KK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CA | N | sing | 1.47Å | 1.46Å | |
CA | C | sing | 1.51Å | 1.51Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
C | O | doub | 1.21Å | 1.24Å | |
CG | CB | sing | 1.53Å | 1.51Å | |
CG | CD | sing | 1.53Å | 1.51Å | |
CD | CE | sing | 1.53Å | 1.52Å | |
CE | NZ | sing | 1.47Å | 1.49Å | |
NZ | C02 | sing | 1.35Å | 1.46Å | |
C05 | C06 | doub | 1.38Å | 1.38Å | Aromatic |
C05 | C04 | sing | 1.40Å | 1.38Å | Aromatic |
C02 | O01 | doub | 1.22Å | 1.26Å | |
C02 | C04 | sing | 1.48Å | 1.48Å | |
C06 | C07 | sing | 1.39Å | 1.39Å | Aromatic |
C04 | C10 | doub | 1.40Å | 1.39Å | Aromatic |
C07 | F08 | sing | 1.35Å | 1.33Å | |
C07 | C09 | doub | 1.39Å | 1.39Å | Aromatic |
C10 | C09 | sing | 1.38Å | 1.39Å | Aromatic |
C | OXT | sing | 1.34Å | 1.33Å | |
N | H1 | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | H4 | sing | 1.09Å | 1.10Å | |
CB | H5 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
CG | H7 | sing | 1.09Å | 1.10Å | |
CG | H8 | sing | 1.09Å | 1.10Å | |
CD | H9 | sing | 1.09Å | 1.10Å | |
CD | H10 | sing | 1.09Å | 1.10Å | |
CE | H11 | sing | 1.09Å | 1.10Å | |
CE | H12 | sing | 1.09Å | 1.10Å | |
NZ | H13 | sing | 0.97Å | 1.00Å | |
C05 | H14 | sing | 1.08Å | 1.08Å | |
C06 | H15 | sing | 1.08Å | 1.08Å | |
C09 | H16 | sing | 1.08Å | 1.08Å | |
C10 | H17 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 107.4° | 109.5° |
N | CA | CB | 111.7° | 109.4° |
CA | N | H1 | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | H4 | 110.2° | 109.5° |
C | CA | CB | 108.8° | 109.4° |
CA | C | O | 120.0° | 120.0° |
CA | C | OXT | 115.9° | 120.0° |
C | CA | H4 | 109.5° | 109.5° |
CA | CB | CG | 114.1° | 109.5° |
CB | CA | H4 | 109.2° | 109.5° |
CA | CB | H5 | 108.3° | 109.5° |
CA | CB | H6 | 108.3° | 109.5° |
O | C | OXT | 124.0° | 120.0° |
CB | CG | CD | 110.2° | 109.5° |
CG | CB | H5 | 108.3° | 109.5° |
CG | CB | H6 | 108.3° | 109.5° |
CB | CG | H7 | 109.3° | 109.5° |
CB | CG | H8 | 109.3° | 109.5° |
CG | CD | CE | 111.6° | 109.5° |
CD | CG | H7 | 109.3° | 109.5° |
CD | CG | H8 | 109.3° | 109.5° |
CG | CD | H9 | 108.9° | 109.5° |
CG | CD | H10 | 109.0° | 109.5° |
CD | CE | NZ | 110.5° | 109.4° |
CE | CD | H9 | 108.9° | 109.5° |
CE | CD | H10 | 108.9° | 109.5° |
CD | CE | H11 | 109.2° | 109.5° |
CD | CE | H12 | 109.2° | 109.5° |
CE | NZ | C02 | 121.3° | 120.0° |
NZ | CE | H11 | 109.2° | 109.4° |
NZ | CE | H12 | 109.2° | 109.5° |
CE | NZ | H13 | 119.3° | 120.1° |
NZ | C02 | O01 | 120.5° | 120.0° |
NZ | C02 | C04 | 119.9° | 120.0° |
C02 | NZ | H13 | 119.3° | 120.0° |
C06 | C05 | C04 | 119.7° | 119.9° |
C05 | C06 | C07 | 120.0° | 120.1° |
C06 | C05 | H14 | 120.1° | 120.0° |
C05 | C06 | H15 | 120.0° | 119.9° |
C05 | C04 | C02 | 119.6° | 120.1° |
C05 | C04 | C10 | 120.5° | 119.7° |
C04 | C05 | H14 | 120.1° | 120.1° |
O01 | C02 | C04 | 119.1° | 120.0° |
C02 | C04 | C10 | 119.9° | 120.1° |
C06 | C07 | F08 | 119.8° | 119.9° |
C06 | C07 | C09 | 120.2° | 120.2° |
C07 | C06 | H15 | 120.0° | 120.0° |
C04 | C10 | C09 | 119.7° | 119.8° |
C04 | C10 | H17 | 120.2° | 120.1° |
F08 | C07 | C09 | 120.1° | 119.9° |
C07 | C09 | C10 | 120.0° | 120.2° |
C07 | C09 | H16 | 120.0° | 119.9° |
C10 | C09 | H16 | 120.0° | 119.9° |
C09 | C10 | H17 | 120.2° | 120.1° |
C | OXT | HXT | 109.5° | 117.0° |
H1 | N | H2 | 109.5° | 111.0° |
H5 | CB | H6 | 109.5° | 109.4° |
H7 | CG | H8 | 109.5° | 109.5° |
H9 | CD | H10 | 109.4° | 109.5° |
H11 | CE | H12 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 121.0° | 120.0° |
N | CA | C | H4 | 119.7° | 120.0° |
N | CA | CB | H4 | 122.1° | 120.0° |
N | CA | C | O | 46.0° | 19.9° |
N | CA | CB | CG | 60.7° | 65.0° |
N | CA | C | OXT | 133.5° | 160.0° |
CA | N | H1 | H2 | 120.0° | 124.0° |
N | CA | CB | H5 | 60.0° | 55.0° |
N | CA | CB | H6 | 178.7° | 174.9° |
C | CA | CB | H4 | 119.5° | 120.0° |
CA | C | O | OXT | 179.5° | 179.9° |
C | CA | CB | CG | 179.0° | 175.0° |
C | CA | N | H1 | 180.0° | 64.0° |
C | CA | N | H2 | 60.0° | 59.9° |
C | CA | CB | H5 | 58.3° | 65.0° |
C | CA | CB | H6 | 60.3° | 55.0° |
CA | C | OXT | HXT | 179.5° | 179.9° |
CB | CA | C | O | 75.0° | 100.0° |
CA | CB | CG | H5 | 120.7° | 120.0° |
CA | CB | CG | H6 | 120.7° | 120.0° |
CA | CB | CG | CD | 157.9° | 180.0° |
CB | CA | C | OXT | 105.4° | 80.0° |
CB | CA | N | H1 | 60.8° | 176.0° |
CB | CA | N | H2 | 179.2° | 60.0° |
CA | CB | H5 | H6 | 117.9° | 120.0° |
CA | CB | CG | H7 | 37.8° | 60.0° |
CA | CB | CG | H8 | 81.9° | 60.0° |
O | C | CA | H4 | 165.7° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
CB | CG | CD | H7 | 120.1° | 120.0° |
CB | CG | CD | H8 | 120.1° | 120.0° |
CB | CG | CD | CE | 67.0° | 180.0° |
CG | CB | CA | H4 | 61.5° | 55.0° |
CG | CB | H5 | H6 | 117.9° | 120.0° |
CB | CG | H7 | H8 | 119.7° | 120.0° |
CB | CG | CD | H9 | 53.3° | 60.0° |
CB | CG | CD | H10 | 172.7° | 60.0° |
CG | CD | CE | H9 | 120.3° | 120.0° |
CG | CD | CE | H10 | 120.3° | 120.0° |
CG | CD | CE | NZ | 68.2° | 180.0° |
CD | CG | CB | H5 | 81.4° | 60.0° |
CD | CG | CB | H6 | 37.2° | 60.0° |
CD | CG | H7 | H8 | 119.7° | 120.0° |
CG | CD | H9 | H10 | 119.1° | 120.0° |
CG | CD | CE | H11 | 52.0° | 60.0° |
CG | CD | CE | H12 | 171.7° | 60.0° |
CD | CE | NZ | H11 | 120.2° | 119.9° |
CD | CE | NZ | H12 | 120.2° | 120.0° |
CD | CE | NZ | C02 | 106.8° | 180.0° |
CE | CD | CG | H7 | 172.9° | 60.0° |
CE | CD | CG | H8 | 53.1° | 60.0° |
CE | CD | H9 | H10 | 119.0° | 120.0° |
CD | CE | H11 | H12 | 119.5° | 120.1° |
CD | CE | NZ | H13 | 73.2° | 0.1° |
CE | NZ | C02 | H13 | 180.0° | 179.9° |
CE | NZ | C02 | O01 | 2.7° | 0.1° |
CE | NZ | C02 | C04 | 174.4° | 180.0° |
NZ | CE | CD | H9 | 171.5° | 60.0° |
NZ | CE | CD | H10 | 52.2° | 60.0° |
NZ | CE | H11 | H12 | 119.5° | 120.0° |
NZ | C02 | C04 | C05 | 10.0° | 0.2° |
NZ | C02 | O01 | C04 | 171.8° | 180.0° |
NZ | C02 | C04 | C10 | 169.9° | 180.0° |
C02 | NZ | CE | H11 | 13.4° | 60.1° |
C02 | NZ | CE | H12 | 133.0° | 59.9° |
C06 | C05 | C04 | H14 | 180.0° | 180.0° |
C06 | C05 | C04 | C02 | 179.8° | 180.0° |
C05 | C06 | C07 | H15 | 180.0° | 180.0° |
C06 | C05 | C04 | C10 | 0.3° | 0.2° |
C05 | C06 | C07 | F08 | 180.0° | 180.0° |
C05 | C06 | C07 | C09 | 0.1° | 0.1° |
C05 | C04 | C02 | O01 | 161.9° | 179.7° |
C05 | C04 | C02 | C10 | 179.9° | 179.8° |
C04 | C05 | C06 | C07 | 0.2° | 0.0° |
C05 | C04 | C10 | C09 | 0.3° | 0.5° |
C04 | C05 | C06 | H15 | 179.8° | 180.0° |
C05 | C04 | C10 | H17 | 179.7° | 179.7° |
O01 | C02 | C04 | C10 | 18.2° | 0.0° |
O01 | C02 | NZ | H13 | 177.3° | 180.0° |
C02 | C04 | C10 | C09 | 179.8° | 179.7° |
C04 | C02 | NZ | H13 | 5.6° | 0.1° |
C02 | C04 | C05 | H14 | 0.2° | 0.0° |
C02 | C04 | C10 | H17 | 0.2° | 0.1° |
C06 | C07 | F08 | C09 | 179.9° | 179.9° |
C06 | C07 | C09 | C10 | 0.1° | 0.2° |
C07 | C06 | C05 | H14 | 179.8° | 179.9° |
C06 | C07 | C09 | H16 | 179.9° | 179.9° |
C04 | C10 | C09 | C07 | 0.2° | 0.5° |
C04 | C10 | C09 | H17 | 180.0° | 179.8° |
C10 | C04 | C05 | H14 | 179.6° | 179.8° |
C04 | C10 | C09 | H16 | 179.8° | 179.8° |
F08 | C07 | C09 | C10 | 180.0° | 179.7° |
F08 | C07 | C06 | H15 | 0.0° | 0.0° |
F08 | C07 | C09 | H16 | 0.0° | 0.0° |
C07 | C09 | C10 | H16 | 180.0° | 179.7° |
C09 | C07 | C06 | H15 | 179.9° | 180.0° |
C07 | C09 | C10 | H17 | 179.8° | 179.7° |
OXT | C | CA | H4 | 13.9° | 40.0° |
H1 | N | CA | H4 | 60.8° | 56.0° |
H2 | N | CA | H4 | 59.3° | 179.9° |
H4 | CA | CB | H5 | 177.8° | 175.1° |
H4 | CA | CB | H6 | 59.2° | 65.0° |
H5 | CB | CG | H7 | 158.5° | 180.0° |
H5 | CB | CG | H8 | 38.8° | 60.0° |
H6 | CB | CG | H7 | 82.8° | 60.0° |
H6 | CB | CG | H8 | 157.4° | 180.0° |
H7 | CG | CD | H9 | 66.8° | NaN° |
H7 | CG | CD | H10 | 52.6° | 60.0° |
H8 | CG | CD | H9 | 173.5° | 60.0° |
H8 | CG | CD | H10 | 67.2° | 180.0° |
H9 | CD | CE | H11 | 68.3° | 180.0° |
H9 | CD | CE | H12 | 51.4° | 60.0° |
H10 | CD | CE | H11 | 172.3° | 60.0° |
H10 | CD | CE | H12 | 68.0° | 180.0° |
H11 | CE | NZ | H13 | 166.6° | 120.0° |
H12 | CE | NZ | H13 | 46.9° | 120.0° |
H14 | C05 | C06 | H15 | 0.2° | 0.0° |
H16 | C09 | C10 | H17 | 0.2° | 0.0° |