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2J8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C05SE1sing1.99Å1.97ÅAromatic
C07SE1sing1.98Å1.85ÅAromatic
SE2C14sing1.98Å1.85ÅAromatic
SE2C12sing1.99Å1.94ÅAromatic
C19SE3sing1.99Å1.95ÅAromatic
SE3C21sing1.98Å1.87ÅAromatic
N22C01sing1.34Å1.39ÅAromatic
C21C01doub1.36Å1.36ÅAromatic
C01C02sing1.48Å1.52Å
N03C02sing1.37Å1.41Å
C02O25doub1.22Å1.24Å
N03C04sing1.48Å1.49Å
N03HN03sing0.97Å1.00Å
C28C04sing1.53Å1.60Å
C04C05sing1.51Å1.55Å
C04H04sing1.09Å1.10Å
N24C05doub1.30Å1.32ÅAromatic
C08C07doub1.36Å1.38ÅAromatic
C07H07sing1.08Å1.08Å
C09C08sing1.47Å1.52Å
N24C08sing1.34Å1.40ÅAromatic
N10C09sing1.37Å1.40Å
C09O26doub1.22Å1.25Å
C11N10sing1.48Å1.46Å
N10HN10sing0.97Å1.00Å
C31C11sing1.53Å1.62Å
C12C11sing1.51Å1.57Å
C11H11sing1.09Å1.10Å
C12N23doub1.30Å1.30ÅAromatic
C14C15doub1.36Å1.35ÅAromatic
C14H14sing1.08Å1.08Å
C15C16sing1.47Å1.49Å
C15N23sing1.34Å1.41ÅAromatic
N17C16sing1.37Å1.37Å
C16O27doub1.22Å1.25Å
N17C18sing1.48Å1.41Å
N17HN17sing0.97Å1.00Å
C34C18sing1.53Å1.59Å
C18C19sing1.51Å1.53Å
C18H18sing1.09Å1.10Å
C19N22doub1.30Å1.30ÅAromatic
C21H21sing1.08Å1.08Å
C29C28sing1.53Å1.53Å
C28C30sing1.53Å1.55Å
C28H28sing1.09Å1.10Å
C29H29sing1.09Å1.10Å
C29H29Asing1.09Å1.10Å
C29H29Bsing1.09Å1.10Å
C30H30sing1.09Å1.10Å
C30H30Asing1.09Å1.10Å
C30H30Bsing1.09Å1.10Å
C33C31sing1.53Å1.52Å
C31C32sing1.53Å1.54Å
C31H31sing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C32H32Bsing1.09Å1.10Å
C33H33sing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
C33H33Bsing1.09Å1.10Å
C35C34sing1.53Å1.54Å
C36C34sing1.53Å1.50Å
C34H34sing1.09Å1.10Å
C35H35sing1.09Å1.10Å
C35H35Asing1.09Å1.10Å
C35H35Bsing1.09Å1.10Å
C36H36sing1.09Å1.10Å
C36H36Asing1.09Å1.10Å
C36H36Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C05SE1C0786.6°90.9°
SE1C05C04122.7°129.2°
SE1C05N24110.3°100.7°
SE1C07C08109.8°100.1°
SE1C07H07125.1°129.9°
C14SE2C1286.9°90.9°
SE2C14C15109.6°100.1°
SE2C14H14125.2°129.9°
SE2C12C11123.4°129.1°
SE2C12N23109.9°100.8°
C19SE3C2185.1°90.9°
SE3C19C18123.6°129.1°
SE3C19N22110.7°100.8°
SE3C21C01110.9°100.1°
SE3C21H21124.6°130.0°
N22C01C21116.5°122.7°
N22C01C02121.0°119.3°
C01N22C19116.9°125.5°
C21C01C02122.5°118.0°
C01C21H21124.5°129.9°
C01C02N03122.0°119.7°
C01C02O25117.9°120.1°
N03C02O25120.1°120.2°
C02N03C04127.4°114.3°
C02N03HN03116.3°122.8°
C04N03HN03116.3°122.9°
N03C04C28111.0°109.5°
N03C04C05109.4°109.2°
N03C04H04107.9°109.6°
C28C04C05114.4°109.5°
C28C04H04106.6°109.5°
C04C28C29114.2°109.5°
C04C28C30116.7°109.5°
C04C28H28104.1°109.4°
C05C04H04107.3°109.5°
C04C05N24127.0°130.1°
C05N24C08115.0°125.5°
C08C07H07125.1°130.0°
C07C08C09122.0°118.0°
C07C08N24118.3°122.7°
C09C08N24119.7°119.3°
C08C09N10119.6°120.1°
C08C09O26120.3°119.9°
N10C09O26120.1°120.0°
C09N10C11128.3°114.2°
C09N10HN10115.9°122.9°
C11N10HN10115.8°122.9°
N10C11C31112.6°109.5°
N10C11C12108.9°109.3°
N10C11H11108.4°109.5°
C31C11C12113.0°109.5°
C31C11H11106.5°109.5°
C11C31C33115.9°109.5°
C11C31C32114.8°109.5°
C11C31H31105.3°109.5°
C12C11H11107.1°109.5°
C11C12N23126.7°130.1°
C12N23C15115.5°125.5°
C15C14H14125.2°129.9°
C14C15C16119.8°118.0°
C14C15N23118.0°122.7°
C16C15N23122.1°119.3°
C15C16N17114.4°120.1°
C15C16O27121.8°119.9°
N17C16O27123.8°119.9°
C16N17C18132.4°114.1°
C16N17HN17113.8°122.9°
C18N17HN17113.8°122.9°
N17C18C34109.5°109.5°
N17C18C19104.1°109.5°
N17C18H18112.4°109.5°
C34C18C19110.4°109.4°
C34C18H18109.8°109.5°
C18C34C35116.2°109.5°
C18C34C36114.5°109.5°
C18C34H34105.4°109.5°
C19C18H18110.6°109.4°
C18C19N22125.7°130.1°
C29C28C30110.9°109.5°
C29C28H28104.8°109.4°
C28C29H29109.5°109.5°
C28C29H29A109.4°109.5°
C28C29H29B109.5°109.5°
C30C28H28104.6°109.5°
C28C30H30109.5°109.4°
C28C30H30A109.4°109.5°
C28C30H30B109.5°109.4°
H29C29H29A109.5°109.5°
H29C29H29B109.5°109.4°
H29AC29H29B109.5°109.4°
H30C30H30A109.5°109.5°
H30C30H30B109.5°109.5°
H30AC30H30B109.5°109.5°
C33C31C32107.6°109.4°
C33C31H31106.4°109.4°
C31C33H33109.5°109.4°
C31C33H33A109.5°109.5°
C31C33H33B109.5°109.5°
C32C31H31106.1°109.5°
C31C32H32109.5°109.5°
C31C32H32A109.5°109.5°
C31C32H32B109.4°109.5°
H32C32H32A109.4°109.5°
H32C32H32B109.5°109.5°
H32AC32H32B109.5°109.5°
H33C33H33A109.5°109.5°
H33C33H33B109.5°109.5°
H33AC33H33B109.4°109.5°
C35C34C36107.8°109.4°
C35C34H34105.9°109.4°
C34C35H35109.5°109.5°
C34C35H35A109.5°109.5°
C34C35H35B109.5°109.4°
C36C34H34106.2°109.5°
C34C36H36109.5°109.5°
C34C36H36A109.5°109.5°
C34C36H36B109.4°109.5°
H35C35H35A109.4°109.5°
H35C35H35B109.4°109.4°
H35AC35H35B109.5°109.5°
H36C36H36A109.5°109.5°
H36C36H36B109.5°109.4°
H36AC36H36B109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
SE1C05C04N03169.5°166.8°
SE1C05C04C2865.3°73.3°
SE1C05C04N24178.5°179.9°
SE1C05C04H0452.7°46.8°
C05SE1C07C080.2°0.3°
C05SE1C07H07179.8°179.8°
SE1C05N24C080.2°0.3°
C07SE1C05C04178.7°179.8°
C07SE1C05N240.1°0.3°
SE1C07C08H07180.0°179.9°
SE1C07C08C09178.7°180.0°
SE1C07C08N240.4°0.2°
C14SE2C12C11179.6°179.8°
C14SE2C12N230.5°0.2°
SE2C14C15H14180.0°180.0°
SE2C14C15C16178.1°179.9°
SE2C14C15N231.9°0.3°
SE2C12C11N10135.4°174.7°
SE2C12C11C319.5°65.4°
SE2C12C11N23179.9°179.9°
SE2C12C11H11107.5°54.7°
C12SE2C14C150.8°0.2°
C12SE2C14H14179.2°179.8°
SE2C12N23C151.6°0.1°
SE3C19N22C010.6°0.3°
C19SE3C21C010.3°0.2°
SE3C19C18N17157.5°169.2°
SE3C19C18C3440.1°70.8°
SE3C19C18N22178.7°180.0°
SE3C19C18H1881.6°49.2°
C19SE3C21H21179.7°179.8°
SE3C21C01N220.0°0.1°
SE3C21C01H21180.0°179.9°
SE3C21C01C02179.4°180.0°
C21SE3C19C18179.4°179.8°
C21SE3C19N220.5°0.2°
N22C01C21C02179.5°179.9°
N22C01C02N03112.7°0.5°
N22C01C02O2566.2°179.4°
C01N22C19C18179.4°179.7°
N22C01C21H21180.0°179.9°
C21C01C02N0366.8°179.6°
C21C01C02O25114.3°0.5°
C21C01N22C190.4°0.2°
C01C02N03O25178.8°180.0°
C01C02N03C04179.5°178.2°
C01C02N03HN030.5°1.8°
C02C01N22C19179.9°179.7°
C02C01C21H210.6°0.0°
C02N03C04HN03180.0°180.0°
C02N03C04C28176.9°76.7°
C02N03C04C0555.9°163.3°
C02N03C04H0460.5°43.4°
O25C02N03C040.6°1.8°
O25C02N03HN03179.4°178.2°
N03C04C28C05124.4°119.8°
N03C04C28H04117.2°120.2°
N03C04C05H04116.8°120.0°
N03C04C05N249.0°13.1°
N03C04C28C29100.8°180.0°
N03C04C28C30127.6°60.0°
N03C04C28H2812.8°60.1°
HN03N03C04C283.1°103.3°
HN03N03C04C05124.1°16.6°
HN03N03C04H04119.5°136.6°
C28C04C05H04118.0°120.1°
C28C04C05N24116.2°106.8°
C04C28C29C30134.4°120.0°
C04C28C29H28113.3°119.9°
C04C28C30H28114.5°120.0°
C04C28C29H29180.0°60.0°
C04C28C29H29A60.0°180.0°
C04C28C29H29B60.0°60.0°
C04C28C30H30180.0°60.0°
C04C28C30H30A60.0°60.0°
C04C28C30H30B60.0°180.0°
C04C05N24C08178.8°179.8°
C05C04C28C2923.5°60.2°
C05C04C28C30108.1°179.7°
C05C04C28H28137.2°59.7°
H04C04C05N24125.8°133.1°
H04C04C28C29141.9°59.9°
H04C04C28C3010.3°60.2°
H04C04C28H28104.4°179.8°
C05N24C08C070.4°0.1°
C05N24C08C09178.7°179.7°
C07C08C09N24179.1°179.8°
C07C08C09N10106.7°179.6°
C07C08C09O2673.4°0.3°
H07C07C08C091.3°0.1°
H07C07C08N24179.6°179.9°
C08C09N10O26179.9°179.9°
C08C09N10C11178.8°177.2°
C08C09N10HN101.3°2.7°
N24C08C09N1072.4°0.6°
N24C08C09O26107.5°179.5°
C09N10C11HN10180.0°179.9°
C09N10C11C31142.0°71.7°
C09N10C11C1291.9°168.3°
C09N10C11H1124.3°48.4°
O26C09N10C111.2°2.9°
O26C09N10HN10178.8°177.2°
N10C11C31C12123.9°119.8°
N10C11C31H11118.8°120.1°
N10C11C12H11117.1°120.0°
N10C11C12N2344.5°5.4°
N10C11C31C3321.6°174.1°
N10C11C31C32104.8°65.9°
N10C11C31H31138.8°54.2°
HN10N10C11C3138.0°108.2°
HN10N10C11C1288.1°11.7°
HN10N10C11H11155.7°131.7°
C31C11C12H11117.0°120.1°
C31C11C12N23170.4°114.6°
C11C31C33C32129.9°120.0°
C11C31C33H31116.7°120.0°
C11C31C32H31115.9°120.1°
C11C31C32H32180.0°65.1°
C11C31C32H32A60.0°174.9°
C11C31C32H32B60.0°54.9°
C11C31C33H33180.0°60.0°
C11C31C33H33A60.0°180.0°
C11C31C33H33B60.0°60.0°
C11C12N23C15178.5°179.9°
C12C11C31C33102.3°66.0°
C12C11C31C32131.3°53.9°
C12C11C31H3115.0°174.0°
H11C11C12N2372.5°125.4°
H11C11C31C33140.3°54.0°
H11C11C31C3214.0°174.0°
H11C11C31H31102.4°66.0°
C12N23C15C142.5°0.1°
C12N23C15C16178.5°179.8°
C14C15C16N23176.0°179.7°
C14C15C16N1777.6°178.9°
C14C15C16O27100.7°1.0°
H14C14C15C161.9°0.1°
H14C14C15N23178.1°179.8°
C15C16N17O27178.2°180.0°
C15C16N17C18179.1°178.0°
C15C16N17HN170.9°2.0°
N23C15C16N1798.4°1.4°
N23C15C16O2783.3°178.6°
C16N17C18HN17180.0°180.0°
C16N17C18C34126.8°67.0°
C16N17C18C19115.2°173.0°
C16N17C18H184.5°53.0°
O27C16N17C182.7°2.1°
O27C16N17HN17177.3°177.9°
N17C18C34C19114.1°120.1°
N17C18C34H18123.8°120.0°
N17C18C19H18120.9°120.0°
N17C18C19N2221.2°10.8°
N17C18C34C3512.0°65.6°
N17C18C34C36138.8°174.5°
N17C18C34H34104.9°54.4°
HN17N17C18C3453.2°113.0°
HN17N17C18C1964.8°7.0°
HN17N17C18H18175.5°127.0°
C34C18C19H18121.7°120.0°
C34C18C19N22138.6°109.2°
C18C34C35C36130.1°120.0°
C18C34C35H34116.5°120.0°
C18C34C36H34115.9°120.0°
C18C34C35H35180.0°55.5°
C18C34C35H35A60.0°175.5°
C18C34C35H35B60.0°64.5°
C18C34C36H36180.0°60.0°
C18C34C36H36A60.0°180.0°
C18C34C36H36B60.0°60.0°
C19C18C34C35126.0°54.5°
C19C18C34C36107.2°65.5°
C19C18C34H349.2°174.5°
H18C18C19N2299.7°130.8°
H18C18C34C35111.8°174.4°
H18C18C34C3615.0°54.5°
H18C18C34H34131.3°65.6°
C29C28C30H28112.4°120.0°
C28C29H29H29A120.0°120.1°
C28C29H29H29B120.0°120.0°
C28C29H29AH29B120.0°120.0°
C29C28C30H3046.9°60.0°
C29C28C30H30A73.1°180.0°
C29C28C30H30B166.9°60.0°
C30C28C29H2945.6°60.0°
C30C28C29H29A165.6°60.0°
C30C28C29H29B74.4°180.0°
C28C30H30H30A120.0°120.0°
C28C30H30H30B120.0°119.9°
C28C30H30AH30B120.0°120.0°
H28C28C29H2966.7°179.9°
H28C28C29H29A53.3°60.0°
H28C28C29H29B173.3°59.9°
H28C28C30H3065.5°180.0°
H28C28C30H30A174.4°60.0°
H28C28C30H30B54.5°60.0°
H29C29H29AH29B120.0°119.9°
H30C30H30AH30B120.0°120.0°
C33C31C32H31113.6°119.9°
C33C31C32H3249.5°54.9°
C33C31C32H32A169.4°65.1°
C33C31C32H32B70.5°175.0°
C31C33H33H33A120.0°120.0°
C31C33H33H33B120.0°120.0°
C31C33H33AH33B120.0°120.0°
C31C32H32H32A120.0°120.0°
C31C32H32H32B120.0°120.0°
C31C32H32AH32B120.0°120.0°
C32C31C33H3350.1°180.0°
C32C31C33H33A69.9°60.0°
C32C31C33H33B170.1°60.0°
H31C31C32H3264.1°174.8°
H31C31C32H32A55.9°54.9°
H31C31C32H32B175.9°65.1°
H31C31C33H3363.3°60.0°
H31C31C33H33A176.7°60.0°
H31C31C33H33B56.7°180.0°
H32C32H32AH32B120.0°120.1°
H33C33H33AH33B120.0°120.0°
C35C34C36H34113.2°119.9°
C34C35H35H35A120.0°120.1°
C34C35H35H35B120.0°119.9°
C34C35H35AH35B120.0°120.0°
C35C34C36H3649.0°180.0°
C35C34C36H36A169.0°60.0°
C35C34C36H36B71.0°60.1°
C36C34C35H3549.9°64.5°
C36C34C35H35A70.1°55.5°
C36C34C35H35B169.9°175.5°
C34C36H36H36A120.0°120.0°
C34C36H36H36B120.0°120.0°
C34C36H36AH36B120.0°120.1°
H34C34C35H3563.5°175.5°
H34C34C35H35A176.5°64.4°
H34C34C35H35B56.5°55.6°
H34C34C36H3664.2°60.1°
H34C34C36H36A55.9°59.9°
H34C34C36H36B175.8°180.0°
H35C35H35AH35B120.0°120.0°
H36C36H36AH36B120.0°119.9°

246704

PDB entries from 2025-12-24

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