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2IA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
IC2'sing2.16Å2.18Å
PO5'sing1.61Å1.61Å
PO3Psing1.61Å1.48Å
N1C6sing1.33Å1.36ÅAromatic
C2N1doub1.32Å1.35ÅAromatic
C2H2sing1.08Å1.08Å
N3C2sing1.32Å1.35ÅAromatic
N3C4doub1.33Å1.37ÅAromatic
C4C5sing1.40Å1.39ÅAromatic
C5N7sing1.36Å1.35ÅAromatic
C5C6doub1.41Å1.40ÅAromatic
C6N6sing1.38Å1.36Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
C8N7doub1.30Å1.35ÅAromatic
C8H8sing1.08Å1.08Å
N9C4sing1.37Å1.34ÅAromatic
N9C8sing1.36Å1.35ÅAromatic
C1'N9sing1.46Å1.51Å
C1'C2'sing1.55Å1.52Å
C1'H1'sing1.09Å1.10Å
O2PPsing1.61Å1.48Å
O2PHO2Psing0.97Å0.95Å
C2'C3'sing1.55Å1.53Å
C2'H2'sing1.09Å1.10Å
O3PHO3Psing0.97Å0.95Å
C3'O3'sing1.43Å1.41Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'C3'sing1.54Å1.52Å
C4'C5'sing1.53Å1.52Å
O4'C1'sing1.44Å1.42Å
O4'C4'sing1.44Å1.45Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O5'C5'sing1.43Å1.44Å
PO1Pdoub1.48Å1.72Å
C4'H1sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
IC2'C1'109.5°110.9°
IC2'C3'112.7°110.9°
IC2'H2'105.3°110.8°
O5'PO3P108.0°109.5°
O5'PO2P108.3°109.5°
PO5'C5'126.6°123.0°
O5'PO1P111.4°109.5°
O3PPO2P119.1°109.5°
PO3PHO3P109.5°114.0°
O3PPO1P94.9°109.5°
C6N1C2120.9°121.2°
N1C6C5119.3°118.4°
N1C6N6120.0°120.8°
N1C2H2119.6°118.8°
N1C2N3120.8°122.5°
H2C2N3119.6°118.7°
C2N3C4120.8°120.6°
N3C4C5119.4°119.1°
N3C4N9132.6°134.9°
C4C5N7107.2°107.1°
C4C5C6118.8°118.2°
C5C4N9108.0°106.0°
N7C5C6134.0°134.7°
C5N7C8107.8°109.5°
C5C6N6120.8°120.8°
C6N6HN6109.5°120.0°
C6N6HN6A109.4°120.0°
HN6N6HN6A109.5°120.0°
N7C8H8125.4°125.1°
N7C8N9109.3°110.0°
H8C8N9125.3°125.0°
C4N9C8107.7°107.4°
C4N9C1'123.1°126.3°
C8N9C1'129.3°126.3°
N9C1'C2'112.3°110.6°
N9C1'H1'106.7°110.5°
N9C1'O4'109.8°110.7°
C2'C1'H1'109.2°110.6°
C1'C2'C3'102.5°102.1°
C1'C2'H2'115.0°110.9°
C2'C1'O4'107.3°103.5°
H1'C1'O4'111.7°110.8°
PO2PHO2P109.5°114.0°
O2PPO1P114.6°109.5°
C3'C2'H2'112.1°110.9°
C2'C3'O3'115.8°110.5°
C2'C3'H3'109.2°110.5°
C2'C3'C4'106.3°104.1°
O3'C3'H3'100.3°110.5°
C3'O3'HO3'109.5°114.0°
O3'C3'C4'114.2°110.5°
H3'C3'C4'111.0°110.6°
C3'C4'C5'119.1°109.9°
C3'C4'O4'106.1°107.3°
C3'C4'H1105.8°109.9°
C5'C4'O4'111.0°109.9°
C4'C5'H5'109.2°109.5°
C4'C5'H5'A109.2°109.4°
C4'C5'O5'110.4°109.5°
C5'C4'H1100.3°109.9°
C1'O4'C4'110.5°107.0°
O4'C4'H1114.8°110.0°
H5'C5'H5'A109.8°109.5°
H5'C5'O5'109.2°109.5°
H5'AC5'O5'109.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
IC2'C1'N9146.9°86.2°
IC2'C1'C3'119.8°118.2°
IC2'C1'H2'118.3°123.6°
IC2'C1'H1'28.8°36.5°
IC2'C3'H2'118.5°123.6°
IC2'C3'O3'33.5°20.5°
IC2'C3'H3'145.7°102.1°
IC2'C3'C4'94.5°139.1°
IC2'C1'O4'92.4°155.2°
O5'PO3PO2P123.9°120.0°
O5'PO3PO1P114.4°120.0°
O5'PO2PO1P125.0°120.0°
O5'PO2PHO2P125.0°60.0°
O5'PO3PHO3P114.3°180.0°
PO5'C5'C4'108.0°180.0°
PO5'C5'H5'131.9°60.0°
PO5'C5'H5'A11.9°60.0°
O3PPO2PO1P111.2°120.0°
O3PPO2PHO2P111.2°60.1°
O3PPO5'C5'14.5°175.0°
C6N1C2H2179.9°180.0°
C6N1C2N30.1°0.0°
N1C6C5C40.1°0.0°
N1C6C5N7179.9°179.9°
N1C6C5N6180.0°180.0°
N1C6N6HN60.0°0.0°
N1C6N6HN6A120.0°180.0°
N1C2H2N3180.0°180.0°
N1C2N3C40.1°0.0°
C2N1C6C50.0°0.0°
C2N1C6N6180.0°180.0°
H2C2N3C4180.0°180.0°
C2N3C4C50.0°0.0°
C2N3C4N9179.8°180.0°
N3C4C5N9179.9°180.0°
N3C4C5N7179.9°180.0°
N3C4C5C60.1°0.1°
N3C4N9C8179.8°180.0°
N3C4N9C1'0.3°0.0°
C4C5N7C6179.8°179.9°
C4C5C6N6179.9°180.0°
C4C5N7C80.2°0.0°
C5C4N9C80.1°0.0°
C5C4N9C1'179.5°180.0°
N7C5C6N60.1°0.1°
C5N7C8H8179.8°179.9°
N7C5C4N90.1°0.0°
C5N7C8N90.2°0.0°
C5C6N6HN6180.0°179.9°
C5C6N6HN6A60.0°0.0°
C6C5N7C8179.7°179.9°
C6C5C4N9179.8°179.9°
C6N6HN6HN6A120.0°180.0°
N7C8H8N9180.0°179.9°
N7C8N9C40.2°0.0°
N7C8N9C1'179.6°180.0°
H8C8N9C4179.8°180.0°
H8C8N9C1'0.4°0.1°
C4N9C8C1'179.4°179.9°
C4N9C1'C2'57.8°85.0°
C4N9C1'H1'61.8°37.8°
C4N9C1'O4'177.0°160.9°
C8N9C1'C2'121.5°95.1°
C8N9C1'H1'118.9°142.1°
C8N9C1'O4'2.3°19.0°
N9C1'C2'H1'118.1°122.8°
N9C1'C2'O4'120.7°118.5°
N9C1'H1'O4'119.9°123.1°
N9C1'C2'C3'93.3°155.5°
N9C1'C2'H2'28.6°37.3°
N9C1'O4'C4'100.5°158.5°
C2'C1'H1'O4'118.5°114.1°
C1'C2'C3'H2'123.9°118.2°
C1'C2'C3'O3'151.1°97.8°
C1'C2'C3'H3'96.7°139.7°
C1'C2'C3'C4'23.1°20.9°
C2'C1'O4'C4'21.8°40.0°
H1'C1'C2'C3'148.6°81.7°
H1'C1'C2'H2'89.5°160.1°
H1'C1'O4'C4'141.4°78.5°
O2PPO3PHO3P121.7°60.0°
O2PPO5'C5'144.7°65.0°
HO2PO2PPO1P0.0°179.9°
C2'C3'O3'H3'117.3°122.6°
C2'C3'O3'C4'124.0°114.7°
C2'C3'H3'C4'116.8°114.8°
C2'C3'O3'HO3'180.0°61.5°
C2'C3'C4'C5'137.1°121.5°
C3'C2'C1'O4'27.4°37.0°
C2'C3'C4'O4'11.2°2.0°
C2'C3'C4'H1111.1°117.5°
H2'C2'C3'O3'85.1°144.0°
H2'C2'C3'H3'27.2°21.5°
H2'C2'C3'C4'146.9°97.3°
H2'C2'C1'O4'149.2°81.2°
HO3PO3PPO1P0.0°60.0°
O3'C3'H3'C4'121.1°122.7°
O3'C3'C4'C5'93.9°119.9°
O3'C3'C4'O4'140.2°120.7°
O3'C3'C4'H117.8°1.1°
H3'C3'O3'HO3'62.7°61.1°
H3'C3'C4'C5'18.5°2.8°
H3'C3'C4'O4'107.4°116.7°
H3'C3'C4'H1130.3°123.8°
HO3'O3'C3'C4'56.0°176.2°
C3'C4'C5'O4'123.5°117.9°
C3'C4'C5'H1114.7°121.0°
C3'C4'O4'C1'6.4°26.5°
C3'C4'O4'H1116.4°119.5°
C3'C4'C5'H5'58.3°55.0°
C3'C4'C5'H5'A61.7°65.0°
C3'C4'C5'O5'178.4°175.0°
C5'C4'O4'C1'124.3°145.9°
C5'C4'O4'H1112.9°121.1°
C4'C5'H5'H5'A119.6°119.9°
C4'C5'H5'O5'120.8°120.0°
C4'C5'H5'AO5'120.8°120.0°
C1'O4'C4'H1122.9°93.0°
O4'C4'C5'H5'178.1°172.8°
O4'C4'C5'H5'A61.9°52.9°
O4'C4'C5'O5'58.1°67.1°
H5'C5'H5'AO5'119.6°120.0°
H5'C5'C4'H156.4°66.0°
H5'AC5'C4'H1176.3°174.0°
C5'O5'PO1P88.4°55.0°
O5'C5'C4'H163.7°54.0°

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PDB entries from 2024-07-17

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