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2ER

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5N1sing1.36Å1.35ÅAromatic
C2N1sing1.36Å1.32ÅAromatic
N1C1'sing1.47Å1.46Å
N3C2doub1.30Å1.33ÅAromatic
C2H2sing1.08Å1.08Å
C4N3sing1.36Å1.33ÅAromatic
C9C4sing1.47Å1.47Å
C4C5doub1.39Å1.35ÅAromatic
C5N6sing1.38Å1.36Å
C7N6sing1.37Å1.47Å
N6HN6sing0.97Å1.00Å
C7N8doub1.29Å1.41Å
C7H7sing1.08Å1.08Å
N8C1Bsing1.47Å1.46Å
N9C9sing1.35Å1.36Å
O9C9doub1.22Å1.25Å
N9HN9sing0.97Å1.00Å
N9HN9Asing0.97Å1.00Å
O'1P7'doub1.48Å1.55Å
O'LP7Bdoub1.48Å1.50Å
C1'C2'sing1.55Å1.42Å
C1'O4'sing1.44Å1.49Å
C1'H1'sing1.09Å1.10Å
C1BC2''sing1.51Å1.57Å
C1BH1Bsing1.09Å1.10Å
C1BH1BAsing1.09Å1.10Å
C3''C2''sing1.51Å1.53Å
C2''O2Bdoub1.21Å1.24Å
O2'C2'sing1.43Å1.42Å
C2'C3'sing1.55Å1.54Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
O3BC3''sing1.43Å1.41Å
C3''C4Bsing1.53Å1.53Å
C3''H3''sing1.09Å1.10Å
C4'C3'sing1.54Å1.50Å
C3'O3'sing1.43Å1.42Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
O3BHO3Bsing0.97Å0.95Å
O4'C4'sing1.44Å1.42Å
C4'C5'sing1.53Å1.56Å
C4'H4'sing1.09Å1.10Å
C5BC4Bsing1.53Å1.52Å
O4BC4Bsing1.43Å1.45Å
C4BH4Bsing1.09Å1.10Å
O4BHO4Bsing0.97Å0.95Å
C5'O6'sing1.43Å1.37Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O6BC5Bsing1.43Å1.50Å
C5BH5Bsing1.09Å1.10Å
C5BH5BAsing1.09Å1.10Å
O6'P7'sing1.61Å1.60Å
P7BO6Bsing1.61Å1.61Å
O8'P7'sing1.61Å1.54Å
P7'O9'sing1.61Å1.49Å
O8BP7Bsing1.61Å1.52Å
P7BO9Bsing1.61Å1.50Å
O8'HO8'sing0.97Å0.95Å
O8BHO8Bsing0.97Å0.95Å
O9'HO9'sing0.97Å0.95Å
O9BHO9Bsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5N1C2105.9°107.6°
C5N1C1'121.2°126.2°
N1C5C4108.3°106.4°
N1C5N6119.5°126.8°
C2N1C1'132.9°126.2°
N1C2N3111.2°109.5°
N1C2H2124.4°125.3°
N1C1'C2'111.8°110.6°
N1C1'O4'99.8°110.6°
N1C1'H1'111.7°110.6°
N3C2H2124.4°125.2°
C2N3C4106.6°109.2°
N3C4C9120.6°126.4°
N3C4C5108.1°107.3°
C9C4C5131.3°126.3°
C4C9N9113.8°120.0°
C4C9O9123.6°120.0°
C4C5N6132.2°126.9°
C5N6C7114.3°120.1°
C5N6HN6122.8°120.0°
C7N6HN6122.9°120.0°
N6C7N8118.0°120.0°
N6C7H7121.0°120.0°
N8C7H7121.0°120.0°
C7N8C1B117.0°120.0°
N8C1BC2''120.3°109.5°
N8C1BH1B106.0°109.5°
N8C1BH1BA103.5°109.5°
N9C9O9121.9°120.0°
C9N9HN9107.4°120.0°
C9N9HN9A126.3°120.0°
HN9N9HN9A126.3°120.0°
O'1P7'O6'105.2°109.5°
O'1P7'O8'118.3°109.5°
O'1P7'O9'107.0°109.5°
O'LP7BO6B101.5°109.5°
O'LP7BO8B114.6°109.4°
O'LP7BO9B111.7°109.5°
C2'C1'O4'100.9°103.5°
C2'C1'H1'110.8°110.6°
C1'C2'O2'107.7°110.9°
C1'C2'C3'101.0°102.1°
C1'C2'H2'116.5°110.9°
O4'C1'H1'121.0°110.8°
C1'O4'C4'109.0°107.0°
C2''C1BH1B106.0°109.5°
C2''C1BH1BA103.5°109.4°
C1BC2''C3''114.8°120.0°
C1BC2''O2B116.3°120.0°
H1BC1BH1BA118.4°109.5°
C3''C2''O2B127.7°120.0°
C2''C3''O3B91.3°109.5°
C2''C3''C4B114.9°109.5°
C2''C3''H3''118.5°109.5°
O2'C2'C3'111.2°110.9°
O2'C2'H2'107.1°110.8°
C2'O2'HO2'109.5°114.1°
C3'C2'H2'113.2°110.9°
C2'C3'C4'102.1°104.2°
C2'C3'O3'113.1°110.5°
C2'C3'H3'111.8°110.5°
O3BC3''C4B112.2°109.5°
O3BC3''H3''120.9°109.5°
C3''O3BHO3B109.5°113.9°
C4BC3''H3''99.9°109.5°
C3''C4BC5B108.9°109.5°
C3''C4BO4B106.9°109.4°
C3''C4BH4B111.3°109.5°
C4'C3'O3'108.6°110.5°
C4'C3'H3'116.0°110.6°
C3'C4'O4'104.3°107.3°
C3'C4'C5'101.9°109.9°
C3'C4'H4'119.2°109.9°
O3'C3'H3'105.5°110.4°
C3'O3'HO3'109.5°114.0°
O4'C4'C5'114.6°109.9°
O4'C4'H4'107.5°110.0°
C5'C4'H4'109.6°109.8°
C4'C5'O6'107.4°109.5°
C4'C5'H5'110.2°109.4°
C4'C5'H5'A110.6°109.4°
C5BC4BO4B108.9°109.5°
C5BC4BH4B109.4°109.5°
C4BC5BO6B109.5°109.5°
C4BC5BH5B109.5°109.5°
C4BC5BH5BA109.5°109.4°
O4BC4BH4B111.3°109.5°
C4BO4BHO4B109.5°114.0°
O6'C5'H5'110.1°109.5°
O6'C5'H5'A110.6°109.5°
C5'O6'P7'117.6°123.0°
H5'C5'H5'A107.9°109.4°
O6BC5BH5B109.5°109.5°
O6BC5BH5BA109.4°109.5°
C5BO6BP7B116.0°123.0°
H5BC5BH5BA109.5°109.5°
O6'P7'O8'103.4°109.4°
O6'P7'O9'104.8°109.5°
O6BP7BO8B108.0°109.5°
O6BP7BO9B105.4°109.4°
O8'P7'O9'116.6°109.5°
P7'O8'HO8'109.5°114.0°
P7'O9'HO9'109.5°114.0°
O8BP7BO9B114.4°109.5°
P7BO8BHO8B109.5°114.0°
P7BO9BHO9B109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5N1C2C1'179.6°179.7°
C5N1C2N32.2°0.3°
C5N1C2H2177.8°179.7°
N1C5C4N31.0°0.4°
N1C5C4C9177.0°179.8°
N1C5C4N6177.9°179.5°
N1C5N6C7146.4°2.3°
N1C5N6HN633.6°177.7°
C5N1C1'C2'117.9°81.6°
C5N1C1'O4'136.1°164.3°
C5N1C1'H1'6.9°41.2°
N1C2N3H2180.0°179.9°
N1C2N3C41.6°0.1°
C2N1C5C41.9°0.5°
C2N1C5N6179.9°180.0°
C2N1C1'C2'61.7°98.0°
C2N1C1'O4'44.3°16.1°
C2N1C1'H1'173.6°139.2°
C1'N1C2N3178.2°180.0°
C1'N1C2H21.8°0.1°
C1'N1C5C4178.4°179.9°
C1'N1C5N60.2°0.3°
N1C1'C2'O4'105.3°118.5°
N1C1'C2'H1'125.3°122.8°
N1C1'O4'H1'122.9°122.9°
N1C1'C2'O2'92.2°86.3°
N1C1'C2'C3'151.1°155.5°
N1C1'C2'H2'28.0°37.3°
N1C1'O4'C4'147.9°158.5°
C2N3C4C9178.6°180.0°
C2N3C4C50.3°0.2°
H2C2N3C4178.4°180.0°
N3C4C9C5177.8°179.8°
N3C4C5N6178.9°180.0°
N3C4C9N92.0°0.1°
N3C4C9O9168.3°180.0°
C9C4C5N60.9°0.2°
C4C9N9O9170.4°179.9°
C4C9N9HN9180.0°0.0°
C4C9N9HN9A0.0°179.9°
C4C5N6C735.9°178.2°
C4C5N6HN6144.1°1.7°
C5C4C9N9179.7°179.7°
C5C4C9O99.5°0.3°
C5N6C7HN6180.0°179.9°
C5N6C7N8177.6°178.9°
C5N6C7H72.4°1.1°
N6C7N8H7180.0°180.0°
N6C7N8C1B4.9°6.1°
HN6N6C7N82.4°1.2°
HN6N6C7H7177.6°178.8°
C7N8C1BC2''153.1°113.9°
C7N8C1BH1B33.1°126.1°
C7N8C1BH1BA92.2°6.1°
H7C7N8C1B175.1°173.9°
N8C1BC2''H1B120.0°120.0°
N8C1BC2''H1BA114.7°120.0°
N8C1BH1BH1BA115.5°120.0°
N8C1BC2''C3''23.6°175.9°
N8C1BC2''O2B168.2°4.1°
C9N9HN9HN9A180.0°180.0°
O9C9N9HN99.6°179.9°
O9C9N9HN9A170.4°0.0°
O'1P7'O6'C5'50.4°54.9°
O'1P7'O6'O8'124.7°120.0°
O'1P7'O6'O9'112.6°120.1°
O'1P7'O8'O9'129.9°120.0°
O'1P7'O8'HO8'147.5°180.0°
O'1P7'O9'HO9'0.6°59.9°
O'LP7BO6BC5B148.2°55.0°
O'LP7BO6BO8B120.8°120.0°
O'LP7BO6BO9B116.5°120.0°
O'LP7BO8BO9B130.7°120.0°
O'LP7BO8BHO8B179.1°180.0°
O'LP7BO9BHO9B128.1°59.9°
C2'C1'O4'H1'122.5°118.6°
C1'C2'O2'C3'109.8°112.7°
C1'C2'O2'H2'126.0°123.6°
C1'C2'C3'H2'125.3°118.2°
C1'C2'O2'HO2'113.6°180.0°
C1'C2'C3'C4'43.9°20.9°
C1'C2'C3'O3'72.6°97.8°
C1'C2'C3'H3'168.5°139.7°
C2'C1'O4'C4'33.3°40.0°
O4'C1'C2'O2'162.5°155.2°
O4'C1'C2'C3'45.8°37.0°
O4'C1'C2'H2'77.3°81.2°
C1'O4'C4'C3'5.0°26.5°
C1'O4'C4'C5'115.6°146.0°
C1'O4'C4'H4'122.4°93.0°
H1'C1'C2'O2'33.1°36.5°
H1'C1'C2'C3'83.6°81.7°
H1'C1'C2'H2'153.3°160.1°
H1'C1'O4'C4'89.2°78.5°
C2''C1BH1BH1BA115.6°120.0°
C1BC2''C3''O2B166.6°180.0°
C1BC2''C3''O3B106.9°160.2°
C1BC2''C3''C4B137.8°79.8°
C1BC2''C3''H3''19.8°40.2°
H1BC1BC2''C3''143.6°64.1°
H1BC1BC2''O2B48.2°115.8°
H1BAC1BC2''C3''91.1°55.9°
H1BAC1BC2''O2B77.1°124.2°
C2''C3''O3BC4B117.6°120.0°
C2''C3''O3BH3''124.8°120.0°
C2''C3''C4BH3''128.0°120.0°
C2''C3''O3BHO3B53.8°60.0°
C2''C3''C4BC5B152.3°176.8°
C2''C3''C4BO4B90.1°56.8°
C2''C3''C4BH4B31.6°63.2°
O2BC2''C3''O3B59.7°19.8°
O2BC2''C3''C4B55.6°100.2°
O2BC2''C3''H3''173.6°139.8°
O2'C2'C3'H2'120.7°123.6°
O2'C2'C3'C4'157.9°139.1°
O2'C2'C3'O3'41.4°20.4°
O2'C2'C3'H3'77.5°102.1°
C3'C2'O2'HO2'3.8°67.3°
C2'C3'C4'O3'119.7°118.7°
C2'C3'C4'H3'121.7°118.7°
C2'C3'O3'H3'122.5°122.5°
C2'C3'O3'HO3'179.8°61.4°
C2'C3'C4'O4'22.8°2.0°
C2'C3'C4'C5'96.8°121.5°
C2'C3'C4'H4'142.6°117.6°
H2'C2'O2'HO2'120.4°56.4°
H2'C2'C3'C4'81.4°97.3°
H2'C2'C3'O3'162.1°144.0°
H2'C2'C3'H3'43.2°21.5°
O3BC3''C4BH3''129.4°120.0°
O3BC3''C4BC5B49.8°63.2°
O3BC3''C4BO4B167.3°176.8°
O3BC3''C4BH4B70.9°56.8°
C4BC3''O3BHO3B63.8°60.0°
C3''C4BC5BO4B116.3°120.0°
C3''C4BC5BH4B121.9°120.0°
C3''C4BO4BH4B121.8°120.0°
C3''C4BO4BHO4B56.3°55.3°
C3''C4BC5BO6B64.9°175.0°
C3''C4BC5BH5B175.1°55.0°
C3''C4BC5BH5BA55.1°65.0°
H3''C3''O3BHO3B178.6°180.0°
H3''C3''C4BC5B79.7°56.8°
H3''C3''C4BO4B37.9°63.2°
H3''C3''C4BH4B159.6°176.8°
C4'C3'O3'H3'125.0°122.7°
C4'C3'O3'HO3'67.6°176.2°
C3'C4'O4'C5'110.6°119.5°
C3'C4'O4'H4'127.4°119.5°
C3'C4'C5'H4'127.1°121.0°
C3'C4'C5'O6'175.8°175.0°
C3'C4'C5'H5'55.8°55.0°
C3'C4'C5'H5'A63.4°65.0°
O3'C3'C4'O4'96.9°120.7°
O3'C3'C4'C5'143.6°119.9°
O3'C3'C4'H4'22.9°1.1°
H3'C3'O3'HO3'57.4°61.1°
H3'C3'C4'O4'144.5°116.7°
H3'C3'C4'C5'25.0°2.7°
H3'C3'C4'H4'95.7°123.7°
O4'C4'C5'H4'120.9°121.1°
O4'C4'C5'O6'72.2°67.1°
O4'C4'C5'H5'167.8°172.9°
O4'C4'C5'H5'A48.6°52.9°
C4'C5'O6'H5'120.0°120.0°
C4'C5'O6'H5'A120.8°120.0°
C4'C5'H5'H5'A120.8°119.9°
C4'C5'O6'P7'174.3°180.0°
H4'C4'C5'O6'48.7°53.9°
H4'C4'C5'H5'71.3°66.1°
H4'C4'C5'H5'A169.5°174.0°
C5BC4BO4BH4B120.7°120.0°
C5BC4BO4BHO4B61.3°64.7°
C4BC5BO6BH5B120.0°120.0°
C4BC5BO6BH5BA120.0°120.0°
C4BC5BH5BH5BA120.0°119.9°
C4BC5BO6BP7B168.4°180.0°
O4BC4BC5BO6B51.3°65.0°
O4BC4BC5BH5B68.7°175.0°
O4BC4BC5BH5BA171.3°55.0°
H4BC4BO4BHO4B178.0°175.3°
H4BC4BC5BO6B173.2°55.0°
H4BC4BC5BH5B53.2°65.0°
H4BC4BC5BH5BA66.8°175.0°
O6'C5'H5'H5'A120.8°120.1°
C5'O6'P7'O8'175.1°65.0°
C5'O6'P7'O9'62.2°175.0°
H5'C5'O6'P7'54.3°60.1°
H5'AC5'O6'P7'64.9°60.0°
O6BC5BH5BH5BA120.0°120.1°
C5BO6BP7BO8B91.0°65.0°
C5BO6BP7BO9B31.6°175.0°
H5BC5BO6BP7B71.6°60.0°
H5BAC5BO6BP7B48.4°60.0°
O6'P7'O8'O9'114.4°120.0°
O6'P7'O8'HO8'96.8°60.1°
O6'P7'O9'HO9'110.8°179.9°
O6BP7BO8BO9B117.0°120.0°
O6BP7BO8BHO8B66.9°60.0°
O6BP7BO9BHO9B18.7°180.0°
O8'P7'O9'HO9'135.6°60.1°
O9'P7'O8'HO8'17.6°59.9°
O8BP7BO9BHO9B99.8°60.0°
O9BP7BO8BHO8B50.1°60.0°

222624

PDB entries from 2024-07-17

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