2DO
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | C | sing | 1.53Å | 1.54Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | O | sing | 1.43Å | 1.42Å | |
C | OXT | sing | 1.43Å | 1.46Å | |
C | HC | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.53Å | 1.50Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.49Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | CE | sing | 1.53Å | 1.50Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
CE | HE1 | sing | 1.09Å | 1.10Å | |
CE | HE2 | sing | 1.09Å | 1.10Å | |
CE | HE3 | sing | 1.09Å | 1.10Å | |
O | HO | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 106.7° |
CA | N | H2 | 109.5° | 106.7° |
N | CA | C | 111.7° | 109.5° |
N | CA | CB | 108.1° | 109.5° |
N | CA | HA | 110.4° | 109.5° |
H | N | H2 | 109.4° | 106.7° |
C | CA | CB | 113.6° | 109.5° |
C | CA | HA | 104.5° | 109.5° |
CA | C | O | 110.2° | 109.5° |
CA | C | OXT | 116.7° | 109.4° |
CA | C | HC | 101.4° | 109.5° |
CB | CA | HA | 108.4° | 109.4° |
CA | CB | CG | 120.2° | 109.5° |
CA | CB | HB2 | 103.5° | 109.5° |
CA | CB | HB3 | 106.0° | 109.5° |
O | C | OXT | 99.4° | 109.5° |
O | C | HC | 118.1° | 109.5° |
C | O | HO | 109.5° | 106.8° |
OXT | C | HC | 111.8° | 109.4° |
C | OXT | HXT | 109.5° | 106.7° |
CG | CB | HB2 | 103.6° | 109.5° |
CG | CB | HB3 | 106.0° | 109.5° |
CB | CG | CD | 115.4° | 109.5° |
CB | CG | HG2 | 106.2° | 109.5° |
CB | CG | HG3 | 107.6° | 109.5° |
HB2 | CB | HB3 | 118.3° | 109.5° |
CD | CG | HG2 | 106.2° | 109.4° |
CD | CG | HG3 | 107.5° | 109.5° |
CG | CD | CE | 116.3° | 109.5° |
CG | CD | HD2 | 105.6° | 109.4° |
CG | CD | HD3 | 107.3° | 109.5° |
HG2 | CG | HG3 | 114.2° | 109.5° |
CE | CD | HD2 | 105.7° | 109.5° |
CE | CD | HD3 | 107.2° | 109.5° |
CD | CE | HE1 | 109.5° | 109.5° |
CD | CE | HE2 | 109.5° | 109.5° |
CD | CE | HE3 | 109.5° | 109.5° |
HD2 | CD | HD3 | 115.0° | 109.5° |
HE1 | CE | HE2 | 109.5° | 109.5° |
HE1 | CE | HE3 | 109.4° | 109.5° |
HE2 | CE | HE3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 113.8° |
N | CA | C | CB | 122.6° | 120.0° |
N | CA | C | HA | 119.4° | 120.0° |
N | CA | CB | HA | 119.7° | 120.0° |
N | CA | C | O | 62.2° | 60.0° |
N | CA | C | OXT | 50.1° | 180.0° |
N | CA | C | HC | 171.8° | 60.0° |
N | CA | CB | CG | 62.3° | 65.0° |
N | CA | CB | HB2 | 177.1° | 175.0° |
N | CA | CB | HB3 | 57.7° | 55.0° |
H | N | CA | C | 140.6° | 60.0° |
H | N | CA | CB | 93.7° | 60.0° |
H | N | CA | HA | 24.7° | 180.0° |
H2 | N | CA | C | 99.4° | 173.8° |
H2 | N | CA | CB | 26.3° | 53.8° |
H2 | N | CA | HA | 144.7° | 66.2° |
C | CA | CB | HA | 115.7° | 120.0° |
CA | C | O | OXT | 123.1° | 120.0° |
CA | C | O | HC | 115.9° | 120.0° |
CA | C | OXT | HC | 116.1° | 119.9° |
C | CA | CB | CG | 173.1° | 175.0° |
C | CA | CB | HB2 | 58.3° | 55.0° |
C | CA | CB | HB3 | 66.9° | 65.0° |
CA | C | O | HO | 77.6° | 180.0° |
CA | C | OXT | HXT | 177.7° | 60.1° |
CB | CA | C | O | 60.4° | 180.0° |
CB | CA | C | OXT | 172.7° | 60.0° |
CB | CA | C | HC | 65.5° | 60.0° |
CA | CB | CG | HB2 | 114.8° | 120.0° |
CA | CB | CG | HB3 | 120.0° | 120.0° |
CA | CB | HB2 | HB3 | 116.9° | 120.0° |
CA | CB | CG | CD | 43.3° | 180.0° |
CA | CB | CG | HG2 | 160.6° | 60.1° |
CA | CB | CG | HG3 | 76.7° | 60.0° |
HA | CA | C | O | 178.3° | 60.0° |
HA | CA | C | OXT | 69.3° | 60.0° |
HA | CA | C | HC | 52.4° | 180.0° |
HA | CA | CB | CG | 57.4° | 55.0° |
HA | CA | CB | HB2 | 57.4° | 65.0° |
HA | CA | CB | HB3 | 177.4° | 175.0° |
O | C | OXT | HC | 125.5° | 120.0° |
O | C | OXT | HXT | 63.9° | 60.0° |
OXT | C | O | HO | 159.4° | 60.0° |
HC | C | O | HO | 38.3° | 60.0° |
HC | C | OXT | HXT | 61.6° | 180.0° |
CG | CB | HB2 | HB3 | 116.9° | 120.0° |
CB | CG | CD | HG2 | 117.3° | 120.0° |
CB | CG | CD | HG3 | 120.0° | 120.0° |
CB | CG | HG2 | HG3 | 118.4° | 120.0° |
CB | CG | CD | CE | 65.7° | 180.0° |
CB | CG | CD | HD2 | 177.5° | 60.0° |
CB | CG | CD | HD3 | 54.4° | 59.9° |
HB2 | CB | CG | CD | 71.5° | 60.0° |
HB2 | CB | CG | HG2 | 45.9° | 179.9° |
HB2 | CB | CG | HG3 | 168.5° | 60.0° |
HB3 | CB | CG | CD | 163.3° | 60.0° |
HB3 | CB | CG | HG2 | 79.4° | 59.9° |
HB3 | CB | CG | HG3 | 43.3° | 180.0° |
CD | CG | HG2 | HG3 | 118.3° | 120.0° |
CG | CD | CE | HD2 | 116.8° | 119.9° |
CG | CD | CE | HD3 | 120.0° | 120.0° |
CG | CD | HD2 | HD3 | 118.1° | 119.9° |
CG | CD | CE | HE1 | 9.3° | 180.0° |
CG | CD | CE | HE2 | 110.7° | 60.0° |
CG | CD | CE | HE3 | 129.3° | 60.0° |
HG2 | CG | CD | CE | 51.7° | 60.0° |
HG2 | CG | CD | HD2 | 65.2° | 180.0° |
HG2 | CG | CD | HD3 | 171.7° | 60.1° |
HG3 | CG | CD | CE | 174.3° | 60.0° |
HG3 | CG | CD | HD2 | 57.5° | 60.0° |
HG3 | CG | CD | HD3 | 65.6° | 179.9° |
CE | CD | HD2 | HD3 | 118.1° | 120.1° |
CD | CE | HE1 | HE2 | 120.0° | 120.0° |
CD | CE | HE1 | HE3 | 120.0° | 120.0° |
CD | CE | HE2 | HE3 | 120.0° | 120.1° |
HD2 | CD | CE | HE1 | 126.1° | 60.0° |
HD2 | CD | CE | HE2 | 6.1° | 59.9° |
HD2 | CD | CE | HE3 | 113.9° | 180.0° |
HD3 | CD | CE | HE1 | 110.7° | 60.0° |
HD3 | CD | CE | HE2 | 129.3° | 180.0° |
HD3 | CD | CE | HE3 | 9.3° | 60.0° |
HE1 | CE | HE2 | HE3 | 120.0° | 120.0° |