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SummaryGeometryRelated PDB entries

28E

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OAGCAYsing1.36Å1.34Å
CAYCAKdoub1.39Å1.38ÅAromatic
CAYCBDsing1.39Å1.38ÅAromatic
CAKCATsing1.39Å1.37ÅAromatic
CAPCBDsing1.51Å1.53Å
CAPCBEsing1.53Å1.54Å
CBDCBCdoub1.38Å1.39ÅAromatic
CATOABsing1.36Å1.36Å
CATCANdoub1.39Å1.38ÅAromatic
OAQCBEsing1.43Å1.45Å
CBECBFsing1.53Å1.53Å
CBCCANsing1.39Å1.40ÅAromatic
CBCOARsing1.36Å1.36Å
CBFOARsing1.43Å1.45Å
CBFCBAsing1.51Å1.50Å
CBACAJdoub1.38Å1.38ÅAromatic
CBACAOsing1.38Å1.40ÅAromatic
CAJCAIsing1.38Å1.40ÅAromatic
CAOCAVdoub1.38Å1.38ÅAromatic
CAICAUdoub1.39Å1.41ÅAromatic
CAVCAUsing1.39Å1.37ÅAromatic
CAVOADsing1.36Å1.37Å
CAUOACsing1.36Å1.34Å
OABH1sing0.97Å0.95Å
CAKH2sing1.08Å1.08Å
OAGH3sing0.97Å0.95Å
CAPH4sing1.09Å1.10Å
CAPH5sing1.09Å1.10Å
CANH6sing1.08Å1.08Å
CBFH7sing1.09Å1.10Å
CBEH8sing1.09Å1.10Å
OAQH9sing0.97Å0.95Å
CAOH10sing1.08Å1.08Å
OADH11sing0.97Å0.95Å
OACH12sing0.97Å0.95Å
CAIH13sing1.08Å1.08Å
CAJH14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OAGCAYCAK116.7°119.8°
OAGCAYCBD121.1°119.9°
CAYOAGH3109.5°113.9°
CAKCAYCBD122.2°120.2°
CAYCAKCAT120.5°119.9°
CAYCAKH2119.7°120.0°
CAYCBDCAP121.7°118.7°
CAYCBDCBC117.2°119.9°
CAKCATOAB119.6°120.1°
CAKCATCAN118.7°119.9°
CATCAKH2119.7°120.1°
CBDCAPCBE108.1°109.7°
CAPCBDCBC121.0°121.4°
CBDCAPH4109.8°109.4°
CBDCAPH5109.9°109.5°
CAPCBEOAQ117.1°109.7°
CAPCBECBF108.4°108.3°
CBECAPH4109.8°109.4°
CBECAPH5109.8°109.4°
CAPCBEH8106.6°109.7°
CBDCBCCAN121.0°119.8°
CBDCBCOAR120.9°121.8°
OABCATCAN121.6°120.1°
CATOABH1109.5°114.0°
CATCANCBC120.3°120.3°
CATCANH6119.8°119.8°
OAQCBECBF110.0°109.7°
OAQCBEH8107.7°109.7°
CBEOAQH9109.5°114.0°
CBECBFOAR110.1°108.3°
CBECBFCBA115.3°109.7°
CBECBFH7106.7°109.7°
CBFCBEH8106.7°109.7°
CANCBCOAR118.1°118.4°
CBCCANH6119.9°119.9°
CBCOARCBF121.8°117.9°
OARCBFCBA109.7°109.7°
OARCBFH7107.6°109.7°
CBFCBACAJ123.7°119.9°
CBFCBACAO117.3°120.0°
CBACBFH7107.1°109.7°
CAJCBACAO118.9°120.1°
CBACAJCAI120.7°120.1°
CBACAJH14119.6°119.9°
CBACAOCAV121.4°120.0°
CBACAOH10119.3°120.0°
CAJCAICAU118.7°120.0°
CAJCAIH13120.7°120.0°
CAICAJH14119.7°120.0°
CAOCAVCAU119.1°119.9°
CAOCAVOAD119.6°120.1°
CAVCAOH10119.3°120.0°
CAICAUCAV121.1°119.8°
CAICAUOAC121.8°120.1°
CAUCAIH13120.6°120.0°
CAUCAVOAD121.2°120.1°
CAVCAUOAC117.0°120.1°
CAVOADH11109.5°114.0°
CAUOACH12109.5°114.0°
H4CAPH5109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OAGCAYCAKCBD179.5°179.9°
OAGCAYCAKCAT179.8°180.0°
OAGCAYCBDCAP1.6°0.4°
OAGCAYCBDCBC179.3°179.8°
OAGCAYCAKH20.1°0.0°
CAYCAKCATH2180.0°180.0°
CAKCAYCBDCAP178.8°179.5°
CAKCAYCBDCBC1.2°0.2°
CAYCAKCATOAB179.5°179.9°
CAYCAKCATCAN0.2°0.4°
CAKCAYOAGH3180.0°90.1°
CBDCAYCAKCAT0.6°0.0°
CAYCBDCAPCBC177.5°179.8°
CAYCBDCAPCBE150.6°162.3°
CAYCBDCBCCAN1.1°0.1°
CAYCBDCBCOAR179.6°179.4°
CBDCAYCAKH2179.4°180.0°
CBDCAYOAGH30.4°90.0°
CAYCBDCAPH430.8°77.7°
CAYCBDCAPH589.6°42.2°
CAKCATOABCAN179.6°179.7°
CAKCATCANCBC0.3°0.5°
CAKCATOABH1180.0°89.7°
CAKCATCANH6179.7°179.7°
CBDCAPCBEH4119.7°120.0°
CBDCAPCBEH5119.8°120.1°
CBDCAPCBEOAQ179.2°71.5°
CBDCAPCBECBF55.8°48.2°
CAPCBDCBCCAN178.7°179.7°
CAPCBDCBCOAR1.9°0.8°
CBDCAPH4H5120.7°119.9°
CBDCAPCBEH858.7°167.9°
CBECAPCBDCBC26.9°18.0°
CAPCBEOAQCBF124.2°118.9°
CAPCBEOAQH8119.9°120.6°
CAPCBECBFH8114.4°119.7°
CAPCBECBFOAR59.0°64.7°
CAPCBECBFCBA65.8°175.6°
CBECAPH4H5120.7°119.9°
CAPCBECBFH7175.4°55.0°
CAPCBEOAQH9180.0°60.0°
CBDCBCCANCAT0.4°0.3°
CBDCBCCANOAR179.4°179.5°
CBDCBCOARCBF0.0°17.5°
CBCCBDCAPH4146.7°102.1°
CBCCBDCAPH592.9°138.0°
CBDCBCCANH6179.6°179.9°
OABCATCANCBC179.3°179.8°
OABCATCAKH20.6°0.1°
OABCATCANH60.7°0.1°
CATCANCBCH6180.0°179.8°
CATCANCBCOAR179.7°179.8°
CANCATOABH10.4°90.0°
CANCATCAKH2179.8°179.7°
OAQCBECBFH8116.5°120.6°
OAQCBECBFOAR171.9°55.1°
OAQCBECBFCBA63.3°64.7°
OAQCBECAPH459.5°168.4°
OAQCBECAPH561.0°48.5°
OAQCBECBFH755.4°174.8°
CBECBFOARCBC31.3°49.3°
CBECBFOARCBA127.9°119.7°
CBECBFOARH7115.9°119.7°
CBECBFCBAH7118.5°120.6°
CBECBFCBACAJ87.8°83.9°
CBECBFCBACAO94.3°95.9°
CBFCBECAPH4175.5°71.8°
CBFCBECAPH564.1°168.3°
CBFCBEOAQH955.8°178.9°
CANCBCOARCBF179.3°163.0°
CBCOARCBFCBA96.7°169.0°
OARCBCCANH60.3°0.4°
CBCOARCBFH7147.2°70.4°
OARCBFCBAH7116.5°120.5°
OARCBFCBACAJ37.2°35.0°
OARCBFCBACAO140.7°145.3°
OARCBFCBEH855.4°175.6°
CBFCBACAJCAO177.9°179.8°
CBFCBACAJCAI178.0°179.8°
CBFCBACAOCAV177.8°179.9°
CBACBFCBEH8179.8°55.9°
CBFCBACAOH102.2°0.0°
CBFCBACAJH142.0°0.0°
CBACAJCAIH14180.0°179.7°
CAJCBACAOCAV0.2°0.2°
CBACAJCAICAU1.2°0.5°
CAJCBACBFH7153.7°155.5°
CAJCBACAOH10179.8°179.8°
CBACAJCAIH13178.8°179.7°
CAOCBACAJCAI0.2°0.5°
CBACAOCAVH10180.0°180.0°
CBACAOCAVCAU0.5°0.1°
CBACAOCAVOAD179.7°180.0°
CAOCBACBFH724.2°24.7°
CAOCBACAJH14179.8°179.8°
CAJCAICAUH13180.0°179.8°
CAJCAICAUCAV1.9°0.2°
CAJCAICAUOAC179.9°179.7°
CAOCAVCAUCAI1.6°0.1°
CAOCAVCAUOAD179.8°180.0°
CAOCAVCAUOAC179.7°180.0°
CAOCAVOADH11180.0°90.0°
CAICAUCAVOAC178.1°179.9°
CAICAUCAVOAD178.6°180.0°
CAICAUOACH12180.0°89.9°
CAUCAICAJH14178.8°179.8°
CAUCAVCAOH10179.5°179.9°
CAUCAVOADH110.2°90.0°
CAVCAUOACH121.9°90.0°
CAVCAUCAIH13178.1°180.0°
OADCAVCAUOAC0.5°0.0°
OADCAVCAOH100.3°0.0°
OACCAUCAIH130.1°0.1°
H4CAPCBEH861.1°47.8°
H5CAPCBEH8178.5°72.0°
H7CBFCBEH861.1°64.7°
H8CBEOAQH960.1°60.5°
H13CAICAJH141.2°0.0°

247947

PDB entries from 2026-01-21

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