26Y
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| O4' | C4' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.53Å | 1.53Å | |
| C3' | C2' | sing | 1.53Å | 1.53Å | |
| C4' | C5' | sing | 1.53Å | 1.56Å | |
| O2' | C2' | sing | 1.43Å | 1.44Å | |
| C2' | C1' | sing | 1.53Å | 1.52Å | |
| O6' | C6' | sing | 1.43Å | 1.44Å | |
| C5' | C6' | sing | 1.53Å | 1.52Å | |
| C5' | O5' | sing | 1.43Å | 1.44Å | |
| C1' | O5' | sing | 1.43Å | 1.45Å | |
| C1' | N1 | sing | 1.47Å | 1.47Å | |
| N1 | C2 | sing | 1.35Å | 1.34Å | |
| C2 | O3 | doub | 1.22Å | 1.23Å | |
| C2 | C4 | sing | 1.47Å | 1.54Å | |
| C4 | C6 | doub | 1.35Å | 1.54Å | |
| C8 | C9 | doub | 1.38Å | 1.39Å | Aromatic |
| C8 | C7 | sing | 1.40Å | 1.39Å | Aromatic |
| C6 | C7 | sing | 1.47Å | 1.40Å | |
| C9 | C10 | sing | 1.38Å | 1.39Å | Aromatic |
| C7 | C12 | doub | 1.40Å | 1.40Å | Aromatic |
| C10 | C13 | sing | 1.51Å | 1.40Å | |
| C10 | C11 | doub | 1.38Å | 1.40Å | Aromatic |
| C12 | C11 | sing | 1.38Å | 1.40Å | Aromatic |
| C13 | C14 | sing | 1.53Å | 1.54Å | |
| C13 | C15 | sing | 1.53Å | 1.53Å | |
| C14 | H1 | sing | 1.09Å | 1.10Å | |
| C14 | H2 | sing | 1.09Å | 1.10Å | |
| C14 | H3 | sing | 1.09Å | 1.10Å | |
| C13 | H4 | sing | 1.09Å | 1.10Å | |
| C15 | H5 | sing | 1.09Å | 1.10Å | |
| C15 | H6 | sing | 1.09Å | 1.10Å | |
| C15 | H7 | sing | 1.09Å | 1.10Å | |
| C9 | H8 | sing | 1.08Å | 1.08Å | |
| C8 | H9 | sing | 1.08Å | 1.08Å | |
| C11 | H10 | sing | 1.08Å | 1.08Å | |
| C12 | H11 | sing | 1.08Å | 1.08Å | |
| C6 | H12 | sing | 1.08Å | 1.08Å | |
| C4 | H13 | sing | 1.08Å | 1.08Å | |
| N1 | H14 | sing | 0.97Å | 1.00Å | |
| C1' | H15 | sing | 1.09Å | 1.10Å | |
| C5' | H16 | sing | 1.09Å | 1.10Å | |
| C6' | H17 | sing | 1.09Å | 1.10Å | |
| C6' | H18 | sing | 1.09Å | 1.10Å | |
| O6' | H19 | sing | 0.97Å | 0.95Å | |
| C4' | H20 | sing | 1.09Å | 1.10Å | |
| O4' | H21 | sing | 0.97Å | 0.95Å | |
| C3' | H22 | sing | 1.09Å | 1.10Å | |
| O3' | H23 | sing | 0.97Å | 0.95Å | |
| C2' | H24 | sing | 1.09Å | 1.10Å | |
| O2' | H25 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 110.0° | 109.6° |
| O3' | C3' | C2' | 111.2° | 109.6° |
| O3' | C3' | H22 | 109.6° | 109.6° |
| C3' | O3' | H23 | 109.5° | 114.0° |
| O4' | C4' | C3' | 107.4° | 109.6° |
| O4' | C4' | C5' | 109.5° | 109.6° |
| O4' | C4' | H20 | 110.7° | 109.6° |
| C4' | O4' | H21 | 109.5° | 114.0° |
| C4' | C3' | C2' | 109.3° | 109.0° |
| C3' | C4' | C5' | 111.3° | 109.2° |
| C3' | C4' | H20 | 109.2° | 109.5° |
| C4' | C3' | H22 | 108.3° | 109.5° |
| C3' | C2' | O2' | 110.9° | 109.5° |
| C3' | C2' | C1' | 107.8° | 109.2° |
| C2' | C3' | H22 | 108.3° | 109.5° |
| C3' | C2' | H24 | 109.0° | 109.5° |
| C4' | C5' | C6' | 111.8° | 109.4° |
| C4' | C5' | O5' | 111.4° | 109.4° |
| C4' | C5' | H16 | 107.5° | 109.5° |
| C5' | C4' | H20 | 108.8° | 109.5° |
| O2' | C2' | C1' | 109.6° | 109.6° |
| O2' | C2' | H24 | 110.3° | 109.6° |
| C2' | O2' | H25 | 109.5° | 114.0° |
| C2' | C1' | O5' | 109.5° | 109.5° |
| C2' | C1' | N1 | 109.3° | 109.5° |
| C2' | C1' | H15 | 109.0° | 109.4° |
| C1' | C2' | H24 | 109.1° | 109.5° |
| O6' | C6' | C5' | 106.8° | 109.4° |
| O6' | C6' | H17 | 110.1° | 109.5° |
| O6' | C6' | H18 | 110.1° | 109.5° |
| C6' | O6' | H19 | 109.5° | 114.0° |
| C6' | C5' | O5' | 108.9° | 109.5° |
| C6' | C5' | H16 | 108.0° | 109.5° |
| C5' | C6' | H17 | 110.1° | 109.5° |
| C5' | C6' | H18 | 110.1° | 109.4° |
| C5' | O5' | C1' | 110.0° | 114.1° |
| O5' | C5' | H16 | 109.1° | 109.5° |
| O5' | C1' | N1 | 109.5° | 109.5° |
| O5' | C1' | H15 | 109.9° | 109.5° |
| C1' | N1 | C2 | 122.2° | 120.0° |
| C1' | N1 | H14 | 118.9° | 120.0° |
| N1 | C1' | H15 | 109.7° | 109.5° |
| N1 | C2 | O3 | 124.1° | 120.0° |
| N1 | C2 | C4 | 113.9° | 120.0° |
| C2 | N1 | H14 | 118.9° | 120.0° |
| O3 | C2 | C4 | 122.0° | 120.0° |
| C2 | C4 | C6 | 121.5° | 120.0° |
| C2 | C4 | H13 | 119.2° | 120.0° |
| C4 | C6 | C7 | 121.4° | 120.0° |
| C4 | C6 | H12 | 119.3° | 120.0° |
| C6 | C4 | H13 | 119.3° | 120.0° |
| C9 | C8 | C7 | 120.7° | 119.8° |
| C8 | C9 | C10 | 120.7° | 120.1° |
| C8 | C9 | H8 | 119.7° | 119.9° |
| C9 | C8 | H9 | 119.6° | 120.1° |
| C8 | C7 | C6 | 120.6° | 120.2° |
| C8 | C7 | C12 | 118.8° | 119.7° |
| C7 | C8 | H9 | 119.6° | 120.1° |
| C6 | C7 | C12 | 120.6° | 120.2° |
| C7 | C6 | H12 | 119.3° | 120.0° |
| C9 | C10 | C13 | 116.9° | 119.8° |
| C9 | C10 | C11 | 119.3° | 120.4° |
| C10 | C9 | H8 | 119.6° | 120.0° |
| C7 | C12 | C11 | 120.9° | 119.8° |
| C7 | C12 | H11 | 119.6° | 120.1° |
| C13 | C10 | C11 | 123.8° | 119.8° |
| C10 | C13 | C14 | 108.4° | 109.4° |
| C10 | C13 | C15 | 113.0° | 109.5° |
| C10 | C13 | H4 | 109.4° | 109.5° |
| C10 | C11 | C12 | 119.7° | 120.2° |
| C10 | C11 | H10 | 120.2° | 119.9° |
| C12 | C11 | H10 | 120.2° | 119.9° |
| C11 | C12 | H11 | 119.6° | 120.1° |
| C14 | C13 | C15 | 110.5° | 109.5° |
| C13 | C14 | H1 | 109.5° | 109.5° |
| C13 | C14 | H2 | 109.5° | 109.4° |
| C13 | C14 | H3 | 109.5° | 109.5° |
| C14 | C13 | H4 | 107.7° | 109.4° |
| C15 | C13 | H4 | 107.7° | 109.5° |
| C13 | C15 | H5 | 109.5° | 109.5° |
| C13 | C15 | H6 | 109.5° | 109.5° |
| C13 | C15 | H7 | 109.5° | 109.5° |
| H1 | C14 | H2 | 109.5° | 109.4° |
| H1 | C14 | H3 | 109.4° | 109.5° |
| H2 | C14 | H3 | 109.5° | 109.5° |
| H5 | C15 | H6 | 109.5° | 109.5° |
| H5 | C15 | H7 | 109.4° | 109.4° |
| H6 | C15 | H7 | 109.5° | 109.5° |
| H17 | C6' | H18 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | O4' | 66.6° | 63.2° |
| O3' | C3' | C4' | C2' | 122.4° | 119.9° |
| O3' | C3' | C4' | H22 | 119.8° | 120.2° |
| O3' | C3' | C2' | H22 | 120.5° | 120.2° |
| O3' | C3' | C4' | C5' | 173.6° | 176.9° |
| O3' | C3' | C2' | O2' | 61.0° | 63.2° |
| O3' | C3' | C2' | C1' | 179.1° | 176.8° |
| O3' | C3' | C4' | H20 | 53.5° | 57.0° |
| O3' | C3' | C2' | H24 | 60.7° | 56.9° |
| O4' | C4' | C3' | C5' | 119.8° | 120.0° |
| O4' | C4' | C3' | H20 | 120.1° | 120.2° |
| O4' | C4' | C3' | C2' | 171.1° | 176.9° |
| O4' | C4' | C5' | H20 | 121.1° | 120.2° |
| O4' | C4' | C5' | C6' | 67.1° | 62.4° |
| O4' | C4' | C5' | O5' | 170.7° | 177.6° |
| O4' | C4' | C5' | H16 | 51.2° | 57.6° |
| O4' | C4' | C3' | H22 | 53.3° | 57.0° |
| C4' | C3' | C2' | H22 | 117.8° | 119.8° |
| C3' | C4' | C5' | H20 | 120.3° | 119.8° |
| C4' | C3' | C2' | O2' | 177.4° | 176.9° |
| C4' | C3' | C2' | C1' | 57.4° | 56.9° |
| C3' | C4' | C5' | C6' | 174.3° | 177.6° |
| C3' | C4' | C5' | O5' | 52.1° | 57.6° |
| C3' | C4' | C5' | H16 | 67.4° | 62.4° |
| C3' | C4' | O4' | H21 | 180.0° | 60.3° |
| C4' | C3' | O3' | H23 | 180.0° | 180.0° |
| C4' | C3' | C2' | H24 | 60.9° | 63.0° |
| C2' | C3' | C4' | C5' | 51.3° | 56.9° |
| C3' | C2' | O2' | C1' | 118.9° | 119.7° |
| C3' | C2' | O2' | H24 | 120.9° | 120.1° |
| C3' | C2' | C1' | H24 | 118.2° | 119.9° |
| C3' | C2' | C1' | O5' | 65.2° | 57.6° |
| C3' | C2' | C1' | N1 | 174.8° | 177.6° |
| C3' | C2' | C1' | H15 | 55.0° | 62.4° |
| C2' | C3' | C4' | H20 | 68.9° | 62.9° |
| C2' | C3' | O3' | H23 | 58.8° | 60.4° |
| C3' | C2' | O2' | H25 | 180.0° | 180.0° |
| C4' | C5' | C6' | O6' | 64.0° | 175.1° |
| C4' | C5' | C6' | O5' | 123.5° | 120.0° |
| C4' | C5' | C6' | H16 | 118.1° | 120.0° |
| C4' | C5' | O5' | H16 | 118.5° | 120.0° |
| C4' | C5' | O5' | C1' | 58.9° | 61.2° |
| C4' | C5' | C6' | H17 | 55.6° | 55.1° |
| C4' | C5' | C6' | H18 | 176.4° | 65.0° |
| C5' | C4' | O4' | H21 | 59.0° | 180.0° |
| C5' | C4' | C3' | H22 | 66.6° | 62.9° |
| O2' | C2' | C1' | H24 | 120.9° | 120.2° |
| O2' | C2' | C1' | O5' | 173.9° | 177.5° |
| O2' | C2' | C1' | N1 | 54.0° | 62.5° |
| O2' | C2' | C1' | H15 | 65.8° | 57.5° |
| O2' | C2' | C3' | H22 | 59.5° | 57.0° |
| C2' | C1' | O5' | C5' | 66.5° | 61.2° |
| C2' | C1' | O5' | N1 | 119.8° | 120.0° |
| C2' | C1' | O5' | H15 | 119.7° | 120.0° |
| C2' | C1' | N1 | H15 | 119.4° | 119.9° |
| C2' | C1' | N1 | C2 | 145.6° | 145.0° |
| C2' | C1' | N1 | H14 | 34.4° | 35.0° |
| C1' | C2' | C3' | H22 | 60.4° | 62.9° |
| C1' | C2' | O2' | H25 | 61.1° | 60.3° |
| O6' | C6' | C5' | H17 | 119.6° | 120.0° |
| O6' | C6' | C5' | H18 | 119.6° | 119.9° |
| O6' | C6' | C5' | O5' | 59.5° | 65.0° |
| O6' | C6' | C5' | H16 | 177.9° | 55.1° |
| O6' | C6' | H17 | H18 | 121.2° | 120.0° |
| C6' | C5' | O5' | H16 | 117.7° | 120.1° |
| C6' | C5' | O5' | C1' | 177.3° | 178.9° |
| C5' | C6' | H17 | H18 | 121.2° | 120.0° |
| C5' | C6' | O6' | H19 | 180.0° | 180.0° |
| C6' | C5' | C4' | H20 | 53.9° | 57.8° |
| C5' | O5' | C1' | N1 | 173.7° | 178.9° |
| C5' | O5' | C1' | H15 | 53.2° | 58.8° |
| O5' | C5' | C6' | H17 | 179.1° | 175.0° |
| O5' | C5' | C6' | H18 | 60.0° | 55.0° |
| O5' | C5' | C4' | H20 | 68.2° | 62.2° |
| O5' | C1' | N1 | H15 | 120.7° | 120.1° |
| O5' | C1' | N1 | C2 | 94.4° | 95.0° |
| O5' | C1' | N1 | H14 | 85.5° | 85.0° |
| C1' | O5' | C5' | H16 | 59.6° | 58.8° |
| O5' | C1' | C2' | H24 | 53.0° | 62.3° |
| C1' | N1 | C2 | H14 | 180.0° | 180.0° |
| C1' | N1 | C2 | O3 | 0.2° | 0.0° |
| C1' | N1 | C2 | C4 | 179.8° | NaN° |
| N1 | C1' | C2' | H24 | 66.9° | 57.7° |
| N1 | C2 | O3 | C4 | 180.0° | 180.0° |
| N1 | C2 | C4 | C6 | 178.8° | 180.0° |
| N1 | C2 | C4 | H13 | 1.2° | 0.0° |
| C2 | N1 | C1' | H15 | 26.2° | 25.1° |
| O3 | C2 | C4 | C6 | 1.2° | 0.0° |
| O3 | C2 | C4 | H13 | 178.7° | 180.0° |
| O3 | C2 | N1 | H14 | 179.8° | 180.0° |
| C2 | C4 | C6 | H13 | 180.0° | 180.0° |
| C2 | C4 | C6 | C7 | 178.4° | 180.0° |
| C2 | C4 | C6 | H12 | 1.6° | 0.1° |
| C4 | C2 | N1 | H14 | 0.2° | 0.0° |
| C4 | C6 | C7 | C8 | 21.1° | 180.0° |
| C4 | C6 | C7 | H12 | 180.0° | 180.0° |
| C4 | C6 | C7 | C12 | 160.4° | 0.3° |
| C9 | C8 | C7 | H9 | 180.0° | 179.9° |
| C9 | C8 | C7 | C6 | 179.4° | 180.0° |
| C8 | C9 | C10 | H8 | 180.0° | 179.9° |
| C9 | C8 | C7 | C12 | 0.9° | 0.3° |
| C8 | C9 | C10 | C13 | 179.3° | 180.0° |
| C8 | C9 | C10 | C11 | 0.7° | 0.2° |
| C8 | C7 | C6 | C12 | 178.5° | 179.7° |
| C7 | C8 | C9 | C10 | 0.1° | 0.1° |
| C8 | C7 | C12 | C11 | 0.8° | 0.3° |
| C7 | C8 | C9 | H8 | 179.9° | 180.0° |
| C8 | C7 | C12 | H11 | 179.2° | 179.7° |
| C8 | C7 | C6 | H12 | 158.9° | 0.0° |
| C6 | C7 | C12 | C11 | 179.4° | 180.0° |
| C6 | C7 | C8 | H9 | 0.6° | 0.0° |
| C6 | C7 | C12 | H11 | 0.6° | 0.0° |
| C7 | C6 | C4 | H13 | 1.6° | 0.0° |
| C9 | C10 | C13 | C11 | 178.5° | 179.8° |
| C9 | C10 | C11 | C12 | 0.7° | 0.2° |
| C9 | C10 | C13 | C14 | 93.5° | 59.8° |
| C9 | C10 | C13 | C15 | 143.7° | 60.2° |
| C9 | C10 | C13 | H4 | 23.7° | 179.8° |
| C10 | C9 | C8 | H9 | 179.9° | 180.0° |
| C9 | C10 | C11 | H10 | 179.3° | 179.8° |
| C7 | C12 | C11 | C10 | 0.1° | 0.1° |
| C7 | C12 | C11 | H11 | 180.0° | 179.9° |
| C12 | C7 | C8 | H9 | 179.2° | 179.7° |
| C7 | C12 | C11 | H10 | 180.0° | 180.0° |
| C12 | C7 | C6 | H12 | 19.6° | 179.7° |
| C13 | C10 | C11 | C12 | 179.2° | 180.0° |
| C10 | C13 | C14 | C15 | 124.3° | 120.0° |
| C10 | C13 | C14 | H4 | 118.3° | 120.0° |
| C10 | C13 | C15 | H4 | 121.0° | 120.0° |
| C10 | C13 | C14 | H1 | 180.0° | 60.1° |
| C10 | C13 | C14 | H2 | 60.0° | 180.0° |
| C10 | C13 | C14 | H3 | 60.0° | 60.0° |
| C10 | C13 | C15 | H5 | 180.0° | 60.0° |
| C10 | C13 | C15 | H6 | 60.0° | 60.0° |
| C10 | C13 | C15 | H7 | 60.0° | 180.0° |
| C13 | C10 | C9 | H8 | 0.7° | 0.1° |
| C13 | C10 | C11 | H10 | 0.8° | 0.0° |
| C10 | C11 | C12 | H10 | 180.0° | 179.9° |
| C11 | C10 | C13 | C14 | 85.1° | 120.0° |
| C11 | C10 | C13 | C15 | 37.8° | 120.0° |
| C11 | C10 | C13 | H4 | 157.8° | 0.1° |
| C11 | C10 | C9 | H8 | 179.3° | 179.8° |
| C10 | C11 | C12 | H11 | 179.9° | 180.0° |
| C14 | C13 | C15 | H4 | 117.4° | 120.0° |
| C13 | C14 | H1 | H2 | 120.0° | 119.9° |
| C13 | C14 | H1 | H3 | 120.0° | 120.0° |
| C13 | C14 | H2 | H3 | 120.0° | 120.0° |
| C14 | C13 | C15 | H5 | 58.3° | 60.0° |
| C14 | C13 | C15 | H6 | 61.7° | 180.0° |
| C14 | C13 | C15 | H7 | 178.3° | 60.0° |
| C15 | C13 | C14 | H1 | 55.7° | 60.0° |
| C15 | C13 | C14 | H2 | 175.7° | 60.0° |
| C15 | C13 | C14 | H3 | 64.3° | 180.0° |
| C13 | C15 | H5 | H6 | 120.0° | 120.0° |
| C13 | C15 | H5 | H7 | 120.0° | 120.0° |
| C13 | C15 | H6 | H7 | 120.0° | 120.0° |
| H1 | C14 | H2 | H3 | 120.0° | 120.0° |
| H1 | C14 | C13 | H4 | 61.7° | 180.0° |
| H2 | C14 | C13 | H4 | 58.3° | 60.0° |
| H3 | C14 | C13 | H4 | 178.3° | 60.0° |
| H4 | C13 | C15 | H5 | 59.0° | 179.9° |
| H4 | C13 | C15 | H6 | 179.1° | 60.0° |
| H4 | C13 | C15 | H7 | 60.9° | 60.0° |
| H5 | C15 | H6 | H7 | 120.0° | 119.9° |
| H8 | C9 | C8 | H9 | 0.1° | 0.1° |
| H10 | C11 | C12 | H11 | 0.1° | 0.0° |
| H12 | C6 | C4 | H13 | 178.4° | 180.0° |
| H14 | N1 | C1' | H15 | 153.8° | 154.9° |
| H15 | C1' | C2' | H24 | 173.3° | 177.7° |
| H16 | C5' | C6' | H17 | 62.5° | 64.9° |
| H16 | C5' | C6' | H18 | 58.4° | 175.0° |
| H16 | C5' | C4' | H20 | 172.3° | 177.8° |
| H17 | C6' | O6' | H19 | 60.4° | 60.0° |
| H18 | C6' | O6' | H19 | 60.4° | 60.1° |
| H20 | C4' | O4' | H21 | 60.9° | 59.8° |
| H20 | C4' | C3' | H22 | 173.3° | 177.2° |
| H22 | C3' | O3' | H23 | 61.0° | 59.9° |
| H22 | C3' | C2' | H24 | 178.8° | 177.2° |
| H24 | C2' | O2' | H25 | 59.1° | 59.9° |
